Variant report

Variant	nsv1027325
Chromosome Location	chr8:9264405-9333207
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:478)
CpG islands
(count:61)
Chromatin interactive
region (count:3)
LncRNA
region (count:19)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:478 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr8:9278878-9279410	HepG2	liver:	n/a	n/a
2	ARID3A	chr8:9308180-9309361	HepG2	liver:	n/a	chr8:9309163-9309179
3	ARID3A	chr8:9306103-9306534	HepG2	liver:	n/a	n/a
4	ARID3A	chr8:9291262-9291958	HepG2	liver:	n/a	n/a
5	ARID3A	chr8:9318207-9318547	HepG2	liver:	n/a	n/a
6	ARID3A	chr8:9278102-9278582	HepG2	liver:	n/a	n/a
7	ATF1	chr8:9278166-9278351	K562	blood:	n/a	n/a
8	ATF2	chr8:9321110-9321873	GM12878	blood:	n/a	n/a
9	ATF2	chr8:9321026-9321933	GM12878	blood:	n/a	n/a
10	ATF3	chr8:9273451-9273572	K562	blood:	n/a	n/a
11	BACH1	chr8:9273684-9273878	H1-hESC	embryonic stem cell:	n/a	n/a
12	BACH1	chr8:9269856-9270069	H1-hESC	embryonic stem cell:	n/a	n/a
13	BACH1	chr8:9268141-9268184	K562	blood:	n/a	n/a
14	BACH1	chr8:9273578-9273842	K562	blood:	n/a	n/a
15	BACH1	chr8:9271926-9271967	H1-hESC	embryonic stem cell:	n/a	n/a
16	BATF	chr8:9268145-9268417	GM12878	blood:	n/a	n/a
17	BATF	chr8:9321035-9321493	GM12878	blood:	n/a	n/a
18	BATF	chr8:9321011-9321638	GM12878	blood:	n/a	chr8:9321598-9321608
19	BCL11A	chr8:9321156-9321595	GM12878	blood:	n/a	n/a
20	BCL11A	chr8:9321269-9321587	GM12878	blood:	n/a	n/a
21	BCLAF1	chr8:9321068-9321564	GM12878	blood:	n/a	n/a
22	BCLAF1	chr8:9321061-9321689	GM12878	blood:	n/a	chr8:9321596-9321605 chr8:9321597-9321606
23	BHLHE40	chr8:9308226-9308311	K562	blood:	n/a	n/a
24	BHLHE40	chr8:9321148-9321624	GM12878	blood:	n/a	n/a
25	BHLHE40	chr8:9279045-9279235	HepG2	liver:	n/a	n/a
26	BHLHE40	chr8:9308092-9309235	HepG2	liver:	n/a	n/a
27	BHLHE40	chr8:9273206-9273409	K562	blood:	n/a	chr8:9273312-9273321
28	CEBPB	chr8:9278128-9278424	IMR90	lung:	n/a	n/a
29	CEBPB	chr8:9318173-9318511	HepG2	liver:	n/a	n/a
30	CEBPB	chr8:9321089-9321728	GM12878	blood:	n/a	n/a
31	CEBPB	chr8:9293602-9293928	HepG2	liver:	n/a	chr8:9293763-9293774
32	CEBPB	chr8:9276934-9277284	HepG2	liver:	n/a	n/a
33	CEBPB	chr8:9306068-9306444	IMR90	lung:	n/a	chr8:9306316-9306329 chr8:9306317-9306328 chr8:9306316-9306329
34	CEBPB	chr8:9306127-9306456	HepG2	liver:	n/a	chr8:9306316-9306329 chr8:9306317-9306328 chr8:9306316-9306329
35	CEBPB	chr8:9306032-9306545	Hela-S3	cervix:	n/a	chr8:9306316-9306329 chr8:9306317-9306328 chr8:9306316-9306329
36	CEBPB	chr8:9305473-9305852	A549	lung:	n/a	n/a
37	CEBPB	chr8:9295186-9295259	K562	blood:	n/a	n/a
38	CEBPB	chr8:9306042-9306554	MCF-7	breast:	n/a	chr8:9306316-9306329 chr8:9306317-9306328 chr8:9306316-9306329
39	CEBPB	chr8:9306037-9306510	MCF-7	breast:	n/a	chr8:9306316-9306329 chr8:9306317-9306328 chr8:9306316-9306329
40	CEBPB	chr8:9306110-9306583	A549	lung:	n/a	chr8:9306316-9306329 chr8:9306317-9306328 chr8:9306316-9306329
41	CEBPB	chr8:9315795-9315900	HepG2	liver:	n/a	chr8:9315855-9315866 chr8:9315855-9315868
42	CEBPB	chr8:9305456-9305613	K562	blood:	n/a	n/a
43	CEBPB	chr8:9278151-9278358	H1-hESC	embryonic stem cell:	n/a	n/a
44	CEBPB	chr8:9308169-9308892	HepG2	liver:	n/a	chr8:9308281-9308294 chr8:9308700-9308711
45	CEBPB	chr8:9305999-9306496	HCT-116	colon:	n/a	chr8:9306316-9306329 chr8:9306317-9306328 chr8:9306004-9306016 chr8:9306316-9306329
46	CEBPB	chr8:9305902-9306656	A549	lung:	n/a	chr8:9306316-9306329 chr8:9306317-9306328 chr8:9306004-9306016 chr8:9306316-9306329
47	CEBPB	chr8:9278120-9278416	K562	blood:	n/a	n/a
48	CEBPB	chr8:9276732-9277128	A549	lung:	n/a	n/a
49	CEBPB	chr8:9305412-9305667	A549	lung:	n/a	n/a
50	CEBPB	chr8:9269821-9270284	ECC-1	luminal epithelium:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:9278742-9278792	AoSMC	blood vessel:	n/a
2	chr8:9278742-9278792	HepG2	liver:	n/a
3	chr8:9278742-9278792	AG04449	skin:	fetal
4	chr8:9278742-9278792	GM19239	blood:	n/a
5	chr8:9278742-9278792	GM12891	blood:	n/a
6	chr8:9278742-9278792	RPTEC	kidney:	n/a
7	chr8:9278742-9278792	Hela-S3	cervix:	n/a
8	chr8:9278742-9278792	BJ	skin:	n/a
9	chr8:9278742-9278792	HEEpiC	esophagus:	n/a
10	chr8:9278742-9278792	H1-hESC	embryonic stem cell:	embryo
11	chr8:9278742-9278792	MCF-7	breast:	n/a
12	chr8:9278742-9278792	HUVEC	blood vessel:	n/a
13	chr8:9278742-9278792	SK-N-SH	brain:	n/a
14	chr8:9278742-9278792	HRCEpiC	kidney:	n/a
15	chr8:9278742-9278792	NHBE	bronchial:	n/a
16	chr8:9278742-9278792	AG09319	gingival:	n/a
17	chr8:9278742-9278792	HAEpiC	amniotic membrane:	n/a
18	chr8:9278742-9278792	ovcar-3	ovarian:	n/a
19	chr8:9278742-9278792	GM12878	blood:	n/a
20	chr8:9278742-9278792	IMR90	lung:	fetal
21	chr8:9278742-9278792	HEK293	kidney:	embryo
22	chr8:9278742-9278792	NH-A	brain:	n/a
23	chr8:9278742-9278792	U87	brain:	n/a
24	chr8:9278742-9278792	SKMC	muscle:	n/a
25	chr8:9278742-9278792	HCPEpiC	choroid plexus:	n/a
26	chr8:9278742-9278792	NHDF-neo	bronchial:	n/a
27	chr8:9278742-9278792	HCT-116	colon:	n/a
28	chr8:9278742-9278792	GM12892	blood:	n/a
29	chr8:9278742-9278792	SAEC	small airway:	n/a
30	chr8:9278742-9278792	HRPEpiC	eye:	n/a
31	chr8:9278742-9278792	HCF	heart:	n/a
32	chr8:9278742-9278792	AG10803	skin:	n/a
33	chr8:9278742-9278792	Caco-2	colon:	n/a
34	chr8:9278742-9278792	SK-N-MC	brain:	n/a
35	chr8:9278742-9278792	AG09309	skin:	n/a
36	chr8:9278742-9278792	GM06990	blood:	n/a
37	chr8:9278742-9278792	PFSK-1	brain:	n/a
38	chr8:9278742-9278792	HPAEpiC	pulmonary alveolar:	n/a
39	chr8:9278742-9278792	NT2-D1	testis:	n/a
40	chr8:9278742-9278792	HNPCEpiC	eye:	n/a
41	chr8:9278742-9278792	HL-60	blood:	n/a
42	chr8:9278742-9278792	ECC-1	luminal epithelium:	n/a
43	chr8:9278742-9278792	A549	lung:	n/a
44	chr8:9278742-9278792	HRE	kidney:	n/a
45	chr8:9278742-9278792	SK-N-SH_RA	brain:	n/a
46	chr8:9278742-9278792	AG04450	lung:	fetal
47	chr8:9278742-9278792	CMK	blood:	n/a
48	chr8:9278742-9278792	LNCaP	prostate:	n/a
49	chr8:9278742-9278792	K562	blood:	n/a
50	chr8:9278742-9278792	MCF10A-Er-Src	breast:	n/a

(count:3 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:9268719..9271294-chr8:9413214..9415247,2	MCF-7	breast:
2	chr8:9048939..9051745-chr8:9268709..9271649,2	K562	blood:
3	chr8:9322565..9324066-chr8:9347698..9350401,2	K562	blood:

(count:19 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-PPP1R3B-4	chr8:9273386-9273450	ENSG00000254237
2	lnc-TNKS-4	chr8:9319116-9319330	FPKM1_group_30860_transcript_4
3	lnc-PPP1R3B-8	chr8:9279664-9279765	NONHSAT124954
4	lnc-TNKS-4	chr8:9320538-9320752	NONHSAT124957
5	lnc-TNKS-5	chr8:9311815-9312409	NONHSAT124956
6	lnc-PPP1R3B-4	chr8:9293542-9293715	ENSG00000254237
7	lnc-RP11-10A14.4.1-4	chr8:9271159-9271386	NONHSAT124948
8	lnc-TNKS-4	chr8:9318958-9319950	FPKM1_group_30860_transcript_4
9	lnc-TNKS-4	chr8:9318958-9319950	NONHSAT124957
10	lnc-PPP1R3B-9	chr8:9299027-9299099	NONHSAT124955
11	lnc-PPP1R3B-8	chr8:9280338-9281391	NONHSAT124954
12	lnc-PPP1R3B-7	chr8:9267774-9268026	l_3547_chr8:9260263-9270085_testes
13	lnc-TNKS-5	chr8:9313405-9314332	NONHSAT124956
14	lnc-TNKS-5	chr8:9311208-9311467	NONHSAT124956
15	lnc-PPP1R3B-7	chr8:9266473-9267064	l_3547_chr8:9260263-9270085_testes
16	lnc-PPP1R3B-7	chr8:9269854-9270085	l_3547_chr8:9260263-9270085_testes
17	lnc-PPP1R3B-8	chr8:9282245-9282386	NONHSAT124954
18	lnc-PPP1R3B-9	chr8:9304981-9305257	NONHSAT124955
19	lnc-TNKS-5	chr8:9314677-9314928	NONHSAT124956

No data

Variant related genes	Relation type
ENSG00000249050	TF binding region
ENSG00000254237	TF binding region
ENSG00000249050	CpG island
ENSG00000254237	CpG island
ENSG00000173273	chromatin interactions
ENSG00000272267	chromatin interactions

Extended variants
information (count: 2414 )
Associated
traits (count: 137 )

Variant overlapped rSNPs/rCNVs (count:2414 , 50 per page) page: 1 2 3 4 5 6 7 ... 49

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs12680471	chr8:9264405-9264406	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs73185246	chr8:9264430-9264431	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs562183509	chr8:9264438-9264439	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs572107642	chr8:9264441-9264442	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs187546298	chr8:9264448-9264449	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs118006855	chr8:9264453-9264454	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs192795843	chr8:9264479-9264480	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs532782134	chr8:9264484-9264485	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs185536811	chr8:9264498-9264499	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs563577616	chr8:9264527-9264528	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs529208696	chr8:9264534-9264535	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs549157679	chr8:9264556-9264557	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs565738985	chr8:9264565-9264566	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs371631291	chr8:9264566-9264567	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs534258922	chr8:9264581-9264582	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs149066036	chr8:9264627-9264628	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs113337661	chr8:9264631-9264632	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs570828824	chr8:9264681-9264682	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs6601306	chr8:9264711-9264712	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	disease
20	rs148204434	chr8:9264717-9264718	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs576662540	chr8:9264738-9264739	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs535822183	chr8:9264742-9264743	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs555884561	chr8:9264748-9264749	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs533835630	chr8:9264810-9264811	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs189063940	chr8:9264839-9264840	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs572564646	chr8:9264879-9264880	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs79915687	chr8:9264886-9264887	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs6993239	chr8:9264957-9264958	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs374022783	chr8:9265017-9265018	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs75983081	chr8:9265021-9265022	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs542999525	chr8:9265022-9265023	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs563178183	chr8:9265045-9265046	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs529139770	chr8:9265086-9265087	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs17662402	chr8:9265105-9265106	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs559465115	chr8:9265108-9265109	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs528316987	chr8:9265171-9265172	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs551628339	chr8:9265187-9265188	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs142702128	chr8:9265201-9265202	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs146918481	chr8:9265204-9265205	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs575368516	chr8:9265210-9265211	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs192836516	chr8:9265220-9265221	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs544445934	chr8:9265317-9265318	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs569955601	chr8:9265321-9265322	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs369350947	chr8:9265348-9265349	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs536109289	chr8:9265363-9265364	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs555804725	chr8:9265372-9265373	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs1870395	chr8:9265405-9265406	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs577167022	chr8:9265421-9265422	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs534868095	chr8:9265439-9265440	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs2085640	chr8:9265464-9265465	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance

Variant related diseases (count:137)

Disease	PMID	Source
Crohn''s disease	19220326	CNVD
Psoriasis	19220326	CNVD
Prostate cancer	21965145	CNVD
Prostate cancer	18515986	CNVD
Chronic obstructive pulmonary disease	20378733	CNVD
Autism	18414403	CNVD
Cancer	21183584	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Breast cancer	17603634	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Ovarian cancer	20844748	CNVD
Cervical cancer	17311676	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Schizophrenia	20877625	CNVD
Disorders of sex development	21048976	CNVD
Colorectal cancer	16272173	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Breast cancer	17001317	CNVD
Thyroid cancer	19087340	CNVD
Multiple myeloma	16616336	CNVD
Hepatocellular carcinoma	22174799	CNVD
Heart disease	21282601	CNVD
Prostate cancer	16573809	CNVD
T-cell lymphomas	19863542	CNVD
Ovarian cancer	22174824	CNVD
Colorectal cancer	21297112	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Salivary gland tumor	18059337	CNVD
Breast cancer	17133270	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Breast cancer	17393978	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	21637783	CNVD
Breast cancer	20837533	CNVD
Squamous cell cancer	21044232	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	22429812	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Colorectal cancer	20709793	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Basal cell lymphoma	21115979	CNVD
Breast cancer	21264507	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Oral cancer	21386901	CNVD
Prostate cancer	21088497	CNVD
Breast cancer	20940404	CNVD
Colorectal cancer	19359472	CNVD
Embryonal rhabdomyosarcoma	16790082	CNVD
Gastric cancer	17167181	CNVD
Prostate cancer	16705090	CNVD
8p-syndrome	17576883	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Prostate cancer	17245344	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Cancer	16751803	CNVD
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Breast cancer	21785460	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21509527	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Acute myeloid leukemia	21251322	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	21858162	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Congenital diaphragmatic hernia	21064195	CNVD
Autism	22495311	CNVD
Myelofibrosis	22110671	CNVD
Intellectual disability	22045946	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Breast cancer	16608533	CNVD
Seminomas	18059402	CNVD
Lung cancer	18438408	CNVD
Lung squamous cell carcinoma	22363434	CNVD
Medulloblastoma	16783165	CNVD
Gastric cancer	18160780	CNVD
Breast cancer	21990379	CNVD
Psoriasis	20403174	CNVD
Psoriasis	20663923	CNVD
Crohn''s disease	16909382	CNVD
Cancer	21129771	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Crohn''s disease	20877625	CNVD
Inflammatory disorder	20877625	CNVD
Cardiac defect	21933911	CNVD
Psoriasis	18059266	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Psoriasis	20877625	CNVD
Mental retardation	17847001	CNVD
Prostate cancer	17217626	CNVD
Schizophrenia	21399695	CNVD
Colorectal cancer	21128281	CNVD
Colorectal cancer	19455253	CNVD
Psoriasis	18848619	CNVD
Squamous cell cancer	19047905	CNVD
Colorectal cancer	17229543	CNVD
Gastrointestinal stromal cancer	19259404	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Bladder cancer	21909424	CNVD
Myxofibrosarcoma	16751306	CNVD
Immune disease	21572526	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Kallmann Syndrome 2	22470819	CNVD
Developmental disorder	20461109	CNVD
abnormal development	18461090	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Glioblastoma multiforme	21138945	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21364760	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD

Chromatin state (count:218 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:9260600-9267600	Weak transcription	Brain Germinal Matrix	brain
2	chr8:9260600-9269600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr8:9261600-9266600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr8:9264200-9264800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr8:9264800-9265000	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr8:9265000-9270200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr8:9266600-9268000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
8	chr8:9266800-9267000	Weak transcription	Brain Hippocampus Middle	brain
9	chr8:9267000-9267200	Enhancers	Brain Hippocampus Middle	brain
10	chr8:9267000-9267200	Enhancers	Brain Substantia Nigra	brain
11	chr8:9267000-9268200	Enhancers	Cortex derived primary cultured neurospheres	brain
12	chr8:9267200-9268000	Weak transcription	Brain Hippocampus Middle	brain
13	chr8:9267200-9268200	Weak transcription	Brain Substantia Nigra	brain
14	chr8:9267600-9267800	Enhancers	Brain Germinal Matrix	brain
15	chr8:9267600-9268000	Enhancers	Fetal Brain Female	brain
16	chr8:9267800-9268000	Enhancers	Brain Inferior Temporal Lobe	brain
17	chr8:9267800-9268400	Flanking Active TSS	Brain Germinal Matrix	brain
18	chr8:9267800-9268800	Enhancers	Fetal Brain Male	brain
19	chr8:9268000-9268400	Active TSS	Brain Inferior Temporal Lobe	brain
20	chr8:9268000-9268400	Flanking Active TSS	Fetal Brain Female	brain
21	chr8:9268000-9268600	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
22	chr8:9268000-9268600	Active TSS	Brain Anterior Caudate	brain
23	chr8:9268000-9268600	Active TSS	Brain Hippocampus Middle	brain
24	chr8:9268000-9268800	Active TSS	Brain Cingulate Gyrus	brain
25	chr8:9268200-9268400	Active TSS	Brain Angular Gyrus	brain
26	chr8:9268200-9268600	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
27	chr8:9268200-9268600	Flanking Active TSS	Brain Substantia Nigra	brain
28	chr8:9268200-9268800	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
29	chr8:9268200-9268800	Enhancers	GM12878-XiMat	blood
30	chr8:9268200-9269000	Bivalent Enhancer	Brain Dorsolateral Prefrontal Cortex	brain
31	chr8:9268400-9268600	Bivalent Enhancer	Breast Myoepithelial Primary Cells	Breast
32	chr8:9268400-9268600	Active TSS	Fetal Brain Female	brain
33	chr8:9268400-9268800	Flanking Active TSS	Brain Angular Gyrus	brain
34	chr8:9268400-9268800	Active TSS	Brain Germinal Matrix	brain
35	chr8:9268400-9268800	Flanking Active TSS	Brain Inferior Temporal Lobe	brain
36	chr8:9268400-9269000	Enhancers	Primary B cells from peripheral blood	blood
37	chr8:9268600-9268800	Flanking Active TSS	Brain Anterior Caudate	brain
38	chr8:9268600-9268800	Flanking Active TSS	Brain Hippocampus Middle	brain
39	chr8:9268600-9268800	Enhancers	Brain Substantia Nigra	brain
40	chr8:9268600-9268800	Flanking Active TSS	Fetal Brain Female	brain
41	chr8:9268600-9269000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
42	chr8:9268800-9269000	Enhancers	Brain Angular Gyrus	brain
43	chr8:9268800-9269000	Flanking Active TSS	Brain Cingulate Gyrus	brain
44	chr8:9268800-9269000	Enhancers	Brain Germinal Matrix	brain
45	chr8:9268800-9269000	Enhancers	Brain Hippocampus Middle	brain
46	chr8:9268800-9269000	Enhancers	Brain Inferior Temporal Lobe	brain
47	chr8:9268800-9269800	Enhancers	Cortex derived primary cultured neurospheres	brain
48	chr8:9268800-9274800	Weak transcription	Fetal Brain Male	brain
49	chr8:9269000-9269600	Weak transcription	Brain Germinal Matrix	brain
50	chr8:9269600-9270000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links