Variant report

Variant	nsv1027550
Chromosome Location	chr9:366387-715668
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:4045)
CpG islands
(count:1098)
Chromatin interactive
region (count:121)
LncRNA
region (count:81)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:4045 , 50 per page) page: 1 2 3 4 5 6 7 ... 81

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:371491-371553	K562	blood:	n/a	n/a
2	ARID3A	chr9:682346-683925	HepG2	liver:	n/a	n/a
3	ARID3A	chr9:706757-707182	HepG2	liver:	n/a	chr9:706927-706943
4	ARID3A	chr9:463883-464115	HepG2	liver:	n/a	n/a
5	ARID3A	chr9:706038-706477	HepG2	liver:	n/a	n/a
6	ARID3A	chr9:613790-614724	HepG2	liver:	n/a	n/a
7	ARID3A	chr9:495829-496174	HepG2	liver:	n/a	n/a
8	ARID3A	chr9:672953-673149	HepG2	liver:	n/a	n/a
9	ARID3A	chr9:504390-504746	K562	blood:	n/a	n/a
10	ARID3A	chr9:673768-674544	HepG2	liver:	n/a	n/a
11	ARID3A	chr9:676651-678350	HepG2	liver:	n/a	n/a
12	ARID3A	chr9:710020-710338	HepG2	liver:	n/a	n/a
13	ARID3A	chr9:489187-489524	HepG2	liver:	n/a	n/a
14	ARID3A	chr9:592251-592433	HepG2	liver:	n/a	n/a
15	ARID3A	chr9:685087-685396	HepG2	liver:	n/a	n/a
16	ARID3A	chr9:696723-696891	HepG2	liver:	n/a	n/a
17	ATF1	chr9:428430-428702	K562	blood:	n/a	n/a
18	ATF1	chr9:491995-492195	K562	blood:	n/a	n/a
19	ATF3	chr9:557723-558324	A549	lung:	n/a	n/a
20	BACH1	chr9:557912-558114	H1-hESC	embryonic stem cell:	n/a	n/a
21	BACH1	chr9:470546-470746	H1-hESC	embryonic stem cell:	n/a	n/a
22	BACH1	chr9:450112-450344	H1-hESC	embryonic stem cell:	n/a	n/a
23	BACH1	chr9:652937-653241	H1-hESC	embryonic stem cell:	n/a	n/a
24	BACH1	chr9:505331-505595	H1-hESC	embryonic stem cell:	n/a	n/a
25	BACH1	chr9:503882-504954	H1-hESC	embryonic stem cell:	n/a	n/a
26	BACH1	chr9:674115-674612	H1-hESC	embryonic stem cell:	n/a	n/a
27	BACH1	chr9:503516-503574	H1-hESC	embryonic stem cell:	n/a	n/a
28	BACH1	chr9:561382-561724	H1-hESC	embryonic stem cell:	n/a	n/a
29	BACH1	chr9:706737-707111	H1-hESC	embryonic stem cell:	n/a	n/a
30	BCL11A	chr9:674204-674357	H1-hESC	embryonic stem cell:	n/a	n/a
31	BCL11A	chr9:674131-674488	H1-hESC	embryonic stem cell:	n/a	n/a
32	BCL3	chr9:489067-489648	A549	lung:	n/a	n/a
33	BCL3	chr9:557812-558394	A549	lung:	n/a	n/a
34	BCL3	chr9:470157-470838	A549	lung:	n/a	n/a
35	BCL3	chr9:469817-470210	A549	lung:	n/a	chr9:470121-470130
36	BCL3	chr9:561341-561682	GM12878	blood:	n/a	n/a
37	BCL3	chr9:561269-561869	A549	lung:	n/a	n/a
38	BCL3	chr9:503842-504488	A549	lung:	n/a	chr9:504175-504184 chr9:504327-504340 chr9:504456-504469
39	BCL3	chr9:463755-464226	A549	lung:	n/a	n/a
40	BCL3	chr9:694616-695281	A549	lung:	n/a	n/a
41	BCLAF1	chr9:469741-470596	GM12878	blood:	n/a	chr9:470121-470130
42	BHLHE40	chr9:504376-504833	GM12878	blood:	n/a	chr9:504430-504446 chr9:504607-504623 chr9:504604-504620 chr9:504606-504622
43	BHLHE40	chr9:546835-547287	K562	blood:	n/a	n/a
44	BHLHE40	chr9:682578-683474	HepG2	liver:	n/a	n/a
45	BHLHE40	chr9:494860-495111	HepG2	liver:	n/a	n/a
46	BHLHE40	chr9:439327-439591	HepG2	liver:	n/a	n/a
47	BHLHE40	chr9:463654-464244	HepG2	liver:	n/a	n/a
48	BHLHE40	chr9:614452-614687	HepG2	liver:	n/a	n/a
49	BHLHE40	chr9:567560-567673	GM12878	blood:	n/a	n/a
50	BHLHE40	chr9:682623-683064	HepG2	liver:	n/a	n/a

(count:1098 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:707166-707216	AG09319	gingival:	n/a
2	chr9:504774-504824	RPTEC	kidney:	n/a
3	chr9:574312-574362	SAEC	small airway:	n/a
4	chr9:705143-705193	GM19239	blood:	n/a
5	chr9:472966-473016	IMR90	lung:	fetal
6	chr9:503937-503987	SAEC	small airway:	n/a
7	chr9:505571-505621	NH-A	brain:	n/a
8	chr9:504774-504824	Hela-S3	cervix:	n/a
9	chr9:507411-507461	GM12891	blood:	n/a
10	chr9:505571-505621	HRE	kidney:	n/a
11	chr9:470109-470159	MCF-7	breast:	n/a
12	chr9:505721-505771	GM06990	blood:	n/a
13	chr9:470323-470373	HNPCEpiC	eye:	n/a
14	chr9:707166-707216	IMR90	lung:	fetal
15	chr9:707166-707216	GM12892	blood:	n/a
16	chr9:505721-505771	H1-hESC	embryonic stem cell:	embryo
17	chr9:705143-705193	HCF	heart:	n/a
18	chr9:470109-470159	RPTEC	kidney:	n/a
19	chr9:470323-470373	HCF	heart:	n/a
20	chr9:574312-574362	AG09309	skin:	n/a
21	chr9:507411-507461	HRPEpiC	eye:	n/a
22	chr9:714269-714319	HL-60	blood:	n/a
23	chr9:470323-470373	SK-N-MC	brain:	n/a
24	chr9:469777-469827	HL-60	blood:	n/a
25	chr9:470109-470159	MCF10A-Er-Src	breast:	n/a
26	chr9:574312-574362	HPAEpiC	pulmonary alveolar:	n/a
27	chr9:714269-714319	BJ	skin:	n/a
28	chr9:470109-470159	AG10803	skin:	n/a
29	chr9:470109-470159	HRE	kidney:	n/a
30	chr9:505571-505621	HCT-116	colon:	n/a
31	chr9:714269-714319	CMK	blood:	n/a
32	chr9:504774-504824	PrEC	prostate:	n/a
33	chr9:707166-707216	NHDF-neo	bronchial:	n/a
34	chr9:505571-505621	U87	brain:	n/a
35	chr9:472966-473016	HCPEpiC	choroid plexus:	n/a
36	chr9:472966-473016	GM19239	blood:	n/a
37	chr9:504774-504824	GM19239	blood:	n/a
38	chr9:505235-505285	SK-N-MC	brain:	n/a
39	chr9:574312-574362	GM12892	blood:	n/a
40	chr9:574312-574362	NT2-D1	testis:	n/a
41	chr9:707166-707216	NT2-D1	testis:	n/a
42	chr9:472966-473016	HNPCEpiC	eye:	n/a
43	chr9:470323-470373	ProgFib	skin:	n/a
44	chr9:471920-471970	HEEpiC	esophagus:	n/a
45	chr9:707410-707460	HEEpiC	esophagus:	n/a
46	chr9:470323-470373	ECC-1	luminal epithelium:	n/a
47	chr9:469777-469827	NHBE	bronchial:	n/a
48	chr9:505571-505621	PFSK-1	brain:	n/a
49	chr9:574312-574362	BJ	skin:	n/a
50	chr9:469777-469827	HRE	kidney:	n/a

(count:121 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr9:535330..537087-chr9:549296..551126,2	K562	blood:
2	chr9:698899..701683-chr9:703340..705392,2	MCF-7	breast:
3	chr9:462619..465055-chr9:466811..469681,2	K562	blood:
4	chr9:707080..708925-chr9:715815..718212,3	MCF-7	breast:
5	chr9:680963..683890-chr9:685859..688092,2	MCF-7	breast:
6	chr9:555602..557901-chr9:561314..563396,2	K562	blood:
7	chr9:468830..470676-chr9:503247..506779,4	MCF-7	breast:
8	chr9:581769..582694-chr9:763829..764743,4	MCF-7	breast:
9	chr9:396487..398165-chr9:401103..402938,2	K562	blood:
10	chr9:680963..683890-chr9:685859..688092,2	MCF-7	breast:
11	chr9:581860..582832-chr9:613640..614518,3	MCF-7	breast:
12	chr9:680230..683179-chr9:683361..685450,2	MCF-7	breast:
13	chr9:535330..537087-chr9:549296..551126,2	K562	blood:
14	chr9:494848..496689-chr9:501659..504144,2	MCF-7	breast:
15	chr9:385494..386481-chr9:546680..547596,3	MCF-7	breast:
16	chr9:469974..471479-chr9:511045..512830,2	K562	blood:
17	chr9:613650..614569-chr9:806256..807252,7	MCF-7	breast:
18	chr9:518740..521510-chr9:531283..533605,2	MCF-7	breast:
19	chr9:469030..473266-chr9:476113..479118,4	MCF-7	breast:
20	chr9:495605..498122-chr9:502386..505122,3	MCF-7	breast:
21	chr9:454517..457686-chr9:460777..463722,3	K562	blood:
22	chr9:444957..447415-chrX:145121393..145123151,2	MCF-7	breast:
23	chr9:613026..614583-chr9:763698..764753,25	MCF-7	breast:
24	chr9:555602..557901-chr9:561314..563396,2	K562	blood:
25	chr9:452598..454624-chr9:456757..459664,2	MCF-7	breast:
26	chr1:27191066..27191830-chr9:408050..409042,2	NB4	blood:
27	chr8:128752586..128753455-chr9:706903..707668,2	NB4	blood:
28	chr9:347477..348464-chr9:378346..378946,4	MCF-7	breast:
29	chr9:523311..524277-chr9:542856..543632,2	MCF-7	breast:
30	chr9:697287..699295-chr9:705065..707332,2	K562	blood:
31	chr9:613586..614504-chr9:756894..758172,6	MCF-7	breast:
32	chr9:613644..614435-chr9:753933..755128,3	MCF-7	breast:
33	chr15:65809681..65810581-chr9:469632..470519,2	NB4	blood:
34	chr9:441366..444017-chr9:451304..454209,2	MCF-7	breast:
35	chr9:682966..685572-chr9:709711..712587,2	MCF-7	breast:
36	chr9:487771..490019-chr9:514331..516293,2	MCF-7	breast:
37	chr10:14226157..14227663-chr9:613613..615133,2	K562	blood:
38	chr9:385756..386457-chr9:1008777..1009377,2	MCF-7	breast:
39	chr9:470985..473419-chr9:489407..491415,2	MCF-7	breast:
40	chr9:468933..471416-chr9:484729..487754,3	MCF-7	breast:
41	chr9:414319..416465-chr9:419585..421155,2	MCF-7	breast:
42	chr1:23494875..23495400-chr9:469098..469749,2	NB4	blood:
43	chr9:454517..457686-chr9:460777..463722,3	K562	blood:
44	chr9:385789..386423-chr9:612104..612846,2	K562	blood:
45	chr5:96288877..96289613-chr9:429812..430395,2	MCF-7	breast:
46	chr9:686763..689090-chr9:692801..694616,2	MCF-7	breast:
47	chr9:457391..459101-chr9:460366..462265,2	MCF-7	breast:
48	chr9:469030..473266-chr9:476113..479118,4	MCF-7	breast:
49	chr9:640721..642302-chr9:644961..647354,2	K562	blood:
50	chr9:710784..713169-chr9:756222..759004,2	MCF-7	breast:

(count:81 , 50 per page) page: 1 2

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C9orf66-2	chr9:459716-460227	ENSG00000227155.3
2	lnc-DOCK8-5	chr9:473194-473273	NONHSAT129927
3	lnc-C9orf66-2	chr9:466688-466853	ENSG00000227155.3
4	lnc-C9orf66-2	chr9:454457-454606	ENSG00000227155.3
5	lnc-C9orf66-2	chr9:458370-458423	ENSG00000227155.3
6	lnc-C9orf66-2	chr9:456518-456703	ENSG00000227155.3
7	lnc-C9orf66-2	chr9:454304-454606	ENSG00000227155.3
8	lnc-C9orf66-2	chr9:456915-457047	ENSG00000227155.3
9	lnc-C9orf66-2	chr9:454304-454606	ENSG00000227155.1
10	lnc-DOCK8-1	chr9:495238-495610	ENSG00000228115.1
11	lnc-DOCK8-2	chr9:549107-549531	ENSG00000226403.1
12	lnc-C9orf66-2	chr9:488957-489066	ENSG00000227155.3
13	lnc-DOCK8-5	chr9:473194-473273	NONHSAT129926
14	lnc-C9orf66-3	chr9:677542-677628	ENSG00000227914.3
15	lnc-DMRT1-3	chr9:659986-660326	NONHSAT129934
16	lnc-C9orf66-2	chr9:459716-459866	ENSG00000227155.3
17	lnc-C9orf66-8	chr9:507258-507553	NONHSAT129930
18	lnc-C9orf66-2	chr9:465962-466069	ENSG00000227155.3
19	lnc-C9orf66-3	chr9:685528-685555	ENSG00000227914.3
20	lnc-C9orf66-2	chr9:456201-456358	ENSG00000227155.1
21	lnc-C9orf66-3	chr9:680857-681046	ENSG00000227914.3
22	lnc-C9orf66-2	chr9:454432-454606	ENSG00000227155.3
23	lnc-C9orf66-2	chr9:465962-466069	ENSG00000227155.3
24	lnc-C9orf66-3	chr9:680857-681046	ENSG00000227914.1
25	lnc-C9orf66-2	chr9:459716-459815	ENSG00000227155.3
26	lnc-C9orf66-2	chr9:456201-456703	ENSG00000227155.3
27	lnc-C9orf66-2	chr9:469722-469802	ENSG00000227155.3
28	lnc-C9orf66-3	chr9:674124-674379	ENSG00000227914.3
29	lnc-C9orf66-3	chr9:673478-674379	ENSG00000227914.3
30	lnc-DOCK8-2	chr9:549107-549525	NONHSAT129931
31	lnc-C9orf66-2	chr9:492084-492112	ENSG00000227155.3
32	lnc-C9orf66-2	chr9:456545-456703	ENSG00000227155.3
33	lnc-C9orf66-2	chr9:465962-466069	ENSG00000227155.3
34	lnc-C9orf66-2	chr9:456211-456703	ENSG00000227155.3
35	lnc-C9orf66-2	chr9:469722-469836	ENSG00000227155.3
36	lnc-C9orf66-2	chr9:456915-457047	ENSG00000227155.3
37	lnc-C9orf66-2	chr9:459716-460507	ENSG00000227155.3
38	lnc-C9orf66-2	chr9:454576-454606	ENSG00000227155.3
39	lnc-C9orf66-2	chr9:454447-454606	ENSG00000227155.3
40	lnc-C9orf66-3	chr9:673817-674379	ENSG00000227914.1
41	lnc-C9orf66-2	chr9:456530-456703	ENSG00000227155.3
42	lnc-C9orf66-2	chr9:470765-470961	ENSG00000227155.3
43	lnc-DOCK8-2	chr9:549190-549531	ENSG00000226403.1
44	lnc-DOCK8-2	chr9:547317-547341	ENSG00000226403.1
45	lnc-C9orf66-2	chr9:459716-459866	ENSG00000227155.3
46	lnc-C9orf66-2	chr9:456915-457047	ENSG00000227155.3
47	lnc-C9orf66-2	chr9:469722-469802	ENSG00000227155.3
48	lnc-DOCK8-1	chr9:487774-487803	ENSG00000228115.1
49	lnc-C9orf66-2	chr9:466688-466866	ENSG00000227155.3
50	lnc-C9orf66-2	chr9:465962-466069	ENSG00000227155.3

No data

Variant related genes	Relation type
ENSG00000226403	TF binding region
DOCK8	TF binding region
RNU6-1327P	TF binding region
ENSG00000227914	TF binding region
ENSG00000227155	TF binding region
RN7SL412P	TF binding region
KANK1	TF binding region
ENSG00000235330	TF binding region
ENSG00000229875	TF binding region
ENSG00000228115	TF binding region
ENSG00000226403	CpG island
DOCK8	CpG island
RNU6-1327P	CpG island
ENSG00000227914	CpG island
ENSG00000227155	CpG island
RN7SL412P	CpG island
KANK1	CpG island
ENSG00000235330	CpG island
ENSG00000229875	CpG island
ENSG00000228115	CpG island
ENSG00000235330	chromatin interactions
ENSG00000226403	chromatin interactions
ENSG00000107104	chromatin interactions
ENSG00000065978	chromatin interactions
ENSG00000227914	chromatin interactions
ENSG00000169641	chromatin interactions
ENSG00000228115	chromatin interactions
ENSG00000227155	chromatin interactions
ENSG00000107099	chromatin interactions
ENSG00000099810	chromatin interactions
ENSG00000074603	chromatin interactions
ENSG00000168209	chromatin interactions
ENSG00000264545	chromatin interactions

Extended variants
information (count: 19918 )
Associated
traits (count: 122 )

Variant overlapped rSNPs/rCNVs (count:19918 , 50 per page) page: 1 2 3 4 5 6 7 ... 399

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs375995218	chr9:366406-366407	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs141463498	chr9:366408-366409	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs528316287	chr9:366445-366446	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs548070599	chr9:366463-366464	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs372983243	chr9:366471-366472	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs559566210	chr9:366493-366494	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs561654057	chr9:366522-366523	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs530764534	chr9:366582-366583	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs544641821	chr9:366590-366591	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs184892175	chr9:366595-366596	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs116468709	chr9:366625-366626	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs145150962	chr9:366633-366634	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs533445731	chr9:366634-366635	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs11788744	chr9:366688-366689	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs368416141	chr9:366690-366691	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs76665559	chr9:366702-366703	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs138825104	chr9:366722-366723	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs556049291	chr9:366726-366727	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs569593731	chr9:366743-366744	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs112315050	chr9:366748-366749	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs189075559	chr9:366759-366760	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs560355147	chr9:366760-366761	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs34101604	chr9:366769-366770	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs181466567	chr9:366781-366782	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs552833359	chr9:366813-366814	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs185762718	chr9:366816-366817	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs541625116	chr9:366827-366828	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs561617793	chr9:366834-366835	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs191306950	chr9:366857-366858	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs544213267	chr9:366866-366867	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs10814269	chr9:366911-366912	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
32	rs181197287	chr9:366945-366946	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs141920707	chr9:366979-366980	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs143714296	chr9:367000-367001	Enhancers Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs551441412	chr9:367001-367002	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs569650164	chr9:367009-367010	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs10972564	chr9:367030-367031	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
38	rs549615180	chr9:367042-367043	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs148100715	chr9:367085-367086	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs186250399	chr9:367097-367098	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs558212443	chr9:367178-367179	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs527627884	chr9:367222-367223	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs79813893	chr9:367243-367244	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs141889690	chr9:367271-367272	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs190774426	chr9:367313-367314	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs116939125	chr9:367319-367320	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs150781756	chr9:367329-367330	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs183246213	chr9:367333-367334	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs10972570	chr9:367346-367347	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs201874212	chr9:367371-367372	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:122)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Cancer	20164920	CNVD
Ovarian cancer	21720365	CNVD
Myelofibrosis	22110671	CNVD
Lynch syndrome	18415027	CNVD
Retinoblastoma	21504564	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Glioblastoma multiforme	22286061	CNVD
Williams-beuren syndrome	18553513	CNVD
Disorders of sex development	21048976	CNVD
Pilocytic astrocytoma	18622384	CNVD
Pilomyxoid astrocytoma	18622384	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
prenatal diagnosis	20453657	CNVD
Gastric cancer	16715143	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Intracranial aneurysm	16715129	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Disorders of sex development	22290220	CNVD
Glioblastoma multiforme	21080181	CNVD
Sudden cardiac death	19188705	CNVD
Non-small cell lung cancer	21829676	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21183584	CNVD
Non-small cell lung cancer	21952639	CNVD
Neuroblastoma	18923191	CNVD
Intellectual disability	22102821	CNVD
abnormal development	18461090	CNVD
Honadal dysgenesis	21048976	CNVD
Medulloblastoma	21979893	CNVD
Lung cancer	16740712	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
Developmental delay	21147756	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Schizophrenia	20967226	CNVD
Lung cancer	18438408	CNVD
Autism	20531469	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
XY gonadal dysgenesis	20685758	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Developmental delay	20808231	CNVD
Obesity	20808231	CNVD
Myelodysplastic syndrome	21251322	CNVD
Primary immunodeficiency	22942019	CNVD
Melanoma	20877625	CNVD
Breast cancer	21785460	CNVD
Prostate cancer	18632612	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Pancreatic cancer	17952125	CNVD
T-cell lymphomas	22341440	CNVD
Breast cancer	22522925	CNVD
Autism	20858261	CNVD
Epilepsy	20858261	CNVD
Mental retardation	20858261	CNVD
Breast cancer	21364760	CNVD
Bipolar disorder	19114987	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
early-passage human iPS cells	21368824	CNVD
Renal cell carcinoma	21215367	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Ependymoma	20639864	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Schizophrenia	23813976	CNVD
Non-small cell lung cancer	16651412	CNVD
Cancer	21272361	CNVD

Chromatin state (count:8560 , 50 per page) page: 1 2 3 4 5 6 7 ... 172

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:305200-378000	Weak transcription	Rectal Smooth Muscle	rectum
2	chr9:322400-412200	Strong transcription	Primary T cells from cord blood	blood
3	chr9:322400-447000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
4	chr9:322400-467200	Strong transcription	Primary monocytes fromperipheralblood	blood
5	chr9:322400-467200	Strong transcription	Monocytes-CD14+_RO01746	blood
6	chr9:323600-467200	Strong transcription	Primary B cells from cord blood	blood
7	chr9:335800-371600	Weak transcription	Rectal Mucosa Donor 31	rectum
8	chr9:337200-376600	Weak transcription	Colonic Mucosa	Colon
9	chr9:337600-368000	Weak transcription	Gastric	stomach
10	chr9:337800-378400	Weak transcription	Esophagus	oesophagus
11	chr9:345800-369200	Weak transcription	Lung	lung
12	chr9:346000-369800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
13	chr9:346600-368200	Weak transcription	Pancreas	Pancrea
14	chr9:347200-367800	Weak transcription	Duodenum Mucosa	Duodenum
15	chr9:350400-411200	Strong transcription	Primary B cells from peripheral blood	blood
16	chr9:351200-412400	Strong transcription	Primary T cells fromperipheralblood	blood
17	chr9:351200-446600	Strong transcription	Primary T helper cells fromperipheralblood	blood
18	chr9:351800-377800	Strong transcription	Primary T helper cells PMA-I stimulated	--
19	chr9:352000-446600	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
20	chr9:352200-411000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
21	chr9:357600-467000	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
22	chr9:358000-370400	Weak transcription	K562	blood
23	chr9:358000-444800	Strong transcription	Primary neutrophils fromperipheralblood	blood
24	chr9:359200-371400	Weak transcription	Liver	Liver
25	chr9:360400-412200	Strong transcription	Fetal Thymus	thymus
26	chr9:360400-412400	Strong transcription	Primary hematopoietic stem cells short term culture	blood
27	chr9:360600-377800	Strong transcription	Primary T helper naive cells fromperipheralblood	blood
28	chr9:360600-410800	Strong transcription	Dnd41	blood
29	chr9:360600-412400	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
30	chr9:360800-380000	Strong transcription	Primary hematopoietic stem cells	blood
31	chr9:360800-403600	Strong transcription	Primary T helper 17 cells PMA-I stimulated	--
32	chr9:362000-409400	Strong transcription	Thymus	Thymus
33	chr9:362200-411000	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
34	chr9:364000-376800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
35	chr9:364600-384400	Strong transcription	GM12878-XiMat	blood
36	chr9:364800-373000	Strong transcription	Spleen	Spleen
37	chr9:365200-367000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
38	chr9:365200-367400	Weak transcription	Adipose Nuclei	Adipose
39	chr9:365200-383000	Strong transcription	Primary T helper memory cells from peripheral blood 2	blood
40	chr9:365400-369400	Weak transcription	Duodenum Smooth Muscle	Duodenum
41	chr9:365400-380000	Strong transcription	Primary T killer memory cells from peripheral blood	blood
42	chr9:365600-366400	Strong transcription	Primary T helper naive cells from peripheral blood	blood
43	chr9:365600-366400	Enhancers	Fetal Muscle Leg	muscle
44	chr9:365800-366400	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
45	chr9:365800-366400	Enhancers	Fetal Intestine Small	intestine
46	chr9:365800-366400	Enhancers	Psoas Muscle	Psoas
47	chr9:365800-366400	Enhancers	Skeletal Muscle Male	skeletal muscle
48	chr9:365800-366600	Enhancers	Fetal Intestine Large	intestine
49	chr9:365800-367000	Genic enhancers	Placenta	Placenta
50	chr9:365800-378000	Strong transcription	Primary T killer naive cells fromperipheralblood	blood

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