Variant report

Variant nsv1027612
Chromosome Location chr5:17409558-17432699
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:234 , 50 per page) page: 1 2 3 4 5
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:17403000-17413000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr5:17404600-17411200 Weak transcription Fetal Brain Male brain
3 chr5:17407000-17413000 Weak transcription Stomach Mucosa stomach
4 chr5:17407200-17411200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr5:17407200-17411400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
6 chr5:17407200-17411400 Weak transcription NHEK skin
7 chr5:17407200-17411800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr5:17407200-17411800 Weak transcription HMEC breast
9 chr5:17407200-17412200 Weak transcription NH-A brain
10 chr5:17407800-17413200 Weak transcription Hela-S3 cervix
11 chr5:17411200-17412400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr5:17411200-17416000 Enhancers Fetal Brain Male brain
13 chr5:17411400-17412000 Weak transcription H9 Cell Line embryonic stem cell
14 chr5:17411400-17412200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr5:17411400-17412600 Enhancers NHEK skin
16 chr5:17411600-17411800 Enhancers iPS-15b Cell Line embryonic stem cell
17 chr5:17411600-17411800 Enhancers Monocytes-CD14+_RO01746 blood
18 chr5:17411600-17412800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
19 chr5:17411600-17413000 Enhancers Primary neutrophils fromperipheralblood blood
20 chr5:17411800-17412000 Enhancers Fetal Brain Female brain
21 chr5:17411800-17412200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr5:17411800-17412200 Enhancers Pancreatic Islets Pancreatic Islet
23 chr5:17411800-17412200 Enhancers HMEC breast
24 chr5:17411800-17412200 Enhancers Osteobl bone
25 chr5:17411800-17412400 Weak transcription iPS-15b Cell Line embryonic stem cell
26 chr5:17411800-17413000 Weak transcription Monocytes-CD14+_RO01746 blood
27 chr5:17412000-17412200 Enhancers H9 Cell Line embryonic stem cell
28 chr5:17412000-17412200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
29 chr5:17412000-17412200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
30 chr5:17412000-17412200 Enhancers Fetal Kidney kidney
31 chr5:17412000-17412800 Weak transcription Fetal Brain Female brain
32 chr5:17412000-17413200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
33 chr5:17412000-17415200 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
34 chr5:17412200-17412400 Enhancers Brain Germinal Matrix brain
35 chr5:17412200-17412600 Enhancers NH-A brain
36 chr5:17412200-17413000 Weak transcription H9 Cell Line embryonic stem cell
37 chr5:17412200-17413000 Weak transcription Fetal Kidney kidney
38 chr5:17412200-17413200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr5:17412200-17413400 Weak transcription HMEC breast
40 chr5:17412200-17413600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr5:17412200-17414400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr5:17412400-17412600 Bivalent Enhancer hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr5:17412400-17413200 Enhancers Brain Cingulate Gyrus brain
44 chr5:17412400-17413600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr5:17412400-17414400 Enhancers ES-WA7 Cell Line embryonic stem cell
46 chr5:17412400-17416000 Enhancers iPS-15b Cell Line embryonic stem cell
47 chr5:17412600-17413600 Weak transcription NHEK skin
48 chr5:17412600-17415600 Weak transcription NH-A brain
49 chr5:17412600-17416000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr5:17412800-17413000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell

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