Variant report

Variant	nsv1027818
Chromosome Location	chr5:103318123-103445127
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr5:103424586-103425489	K562	blood:	n/a	n/a
2	ARID3A	chr5:103388967-103389033	K562	blood:	n/a	n/a
3	ATF1	chr5:103424670-103425482	K562	blood:	n/a	n/a
4	ATF1	chr5:103427458-103427492	K562	blood:	n/a	n/a
5	ATF3	chr5:103425143-103425446	K562	blood:	n/a	n/a
6	BACH1	chr5:103420138-103420206	K562	blood:	n/a	n/a
7	BACH1	chr5:103425247-103425428	H1-hESC	embryonic stem cell:	n/a	n/a
8	BACH1	chr5:103424849-103425597	K562	blood:	n/a	n/a
9	BATF	chr5:103425050-103425493	GM12878	blood:	n/a	chr5:103425282-103425293
10	BATF	chr5:103400582-103400825	GM12878	blood:	n/a	n/a
11	BATF	chr5:103425096-103425463	GM12878	blood:	n/a	chr5:103425282-103425293
12	BCL11A	chr5:103425108-103425491	GM12878	blood:	n/a	chr5:103425281-103425290 chr5:103425282-103425291
13	BCL11A	chr5:103425087-103425461	GM12878	blood:	n/a	chr5:103425281-103425290 chr5:103425282-103425291
14	BHLHE40	chr5:103424858-103425183	K562	blood:	n/a	n/a
15	CBX3	chr5:103366839-103367160	K562	blood:	n/a	n/a
16	CBX3	chr5:103424562-103425521	K562	blood:	n/a	n/a
17	CBX3	chr5:103354061-103354401	HCT-116	colon:	n/a	n/a
18	CBX3	chr5:103354014-103354389	K562	blood:	n/a	n/a
19	CBX3	chr5:103440319-103440817	K562	blood:	n/a	n/a
20	CBX3	chr5:103424834-103425657	HCT-116	colon:	n/a	n/a
21	CBX3	chr5:103354013-103354398	K562	blood:	n/a	n/a
22	CCNT2	chr5:103424875-103425443	K562	blood:	n/a	n/a
23	CEBPB	chr5:103427128-103427147	H1-hESC	embryonic stem cell:	n/a	chr5:103427132-103427145 chr5:103427134-103427143 chr5:103427134-103427143 chr5:103427132-103427145 chr5:103427132-103427145 chr5:103427132-103427143 chr5:103427133-103427144 chr5:103427134-103427143 chr5:103427132-103427143 chr5:103427134-103427143
24	CEBPB	chr5:103424874-103425482	K562	blood:	n/a	chr5:103425288-103425299
25	CEBPB	chr5:103396805-103396884	HepG2	liver:	n/a	chr5:103396855-103396866
26	CEBPB	chr5:103327722-103328032	HepG2	liver:	n/a	n/a
27	CEBPB	chr5:103426969-103427287	HepG2	liver:	n/a	chr5:103427132-103427145 chr5:103427134-103427143 chr5:103427134-103427143 chr5:103427132-103427145 chr5:103427132-103427145 chr5:103427132-103427143 chr5:103427142-103427154 chr5:103427133-103427144 chr5:103427134-103427143 chr5:103427132-103427143 chr5:103427134-103427143
28	CEBPB	chr5:103424886-103425630	HCT-116	colon:	n/a	chr5:103425288-103425299
29	CEBPB	chr5:103424899-103425699	HCT-116	colon:	n/a	chr5:103425288-103425299
30	CEBPB	chr5:103425190-103425358	K562	blood:	n/a	chr5:103425288-103425299
31	CEBPB	chr5:103327757-103328014	A549	lung:	n/a	n/a
32	CEBPB	chr5:103426962-103427302	K562	blood:	n/a	chr5:103427132-103427145 chr5:103427134-103427143 chr5:103427134-103427143 chr5:103427132-103427145 chr5:103427132-103427145 chr5:103427132-103427143 chr5:103427142-103427154 chr5:103427133-103427144 chr5:103427134-103427143 chr5:103427132-103427143 chr5:103427134-103427143
33	CEBPB	chr5:103416135-103416351	K562	blood:	n/a	n/a
34	CEBPB	chr5:103406292-103406611	HepG2	liver:	n/a	n/a
35	CEBPB	chr5:103427036-103427225	A549	lung:	n/a	chr5:103427132-103427145 chr5:103427134-103427143 chr5:103427134-103427143 chr5:103427132-103427145 chr5:103427132-103427145 chr5:103427132-103427143 chr5:103427142-103427154 chr5:103427133-103427144 chr5:103427134-103427143 chr5:103427132-103427143 chr5:103427134-103427143
36	CEBPB	chr5:103406326-103406633	IMR90	lung:	n/a	n/a
37	CEBPB	chr5:103327762-103328081	IMR90	lung:	n/a	n/a
38	CEBPB	chr5:103425252-103425357	HepG2	liver:	n/a	chr5:103425288-103425299
39	CEBPB	chr5:103424808-103425495	K562	blood:	n/a	chr5:103425288-103425299
40	CEBPB	chr5:103406403-103406641	A549	lung:	n/a	n/a
41	CEBPB	chr5:103406370-103406566	K562	blood:	n/a	n/a
42	CEBPB	chr5:103396717-103396915	A549	lung:	n/a	chr5:103396855-103396866
43	CEBPB	chr5:103426963-103427303	IMR90	lung:	n/a	chr5:103427132-103427145 chr5:103427134-103427143 chr5:103427134-103427143 chr5:103427132-103427145 chr5:103427132-103427145 chr5:103427132-103427143 chr5:103427142-103427154 chr5:103427133-103427144 chr5:103427134-103427143 chr5:103427132-103427143 chr5:103427134-103427143
44	CEBPD	chr5:103351418-103351799	K562	blood:	n/a	n/a
45	CEBPD	chr5:103424716-103425279	K562	blood:	n/a	n/a
46	CEBPD	chr5:103424768-103425471	K562	blood:	n/a	n/a
47	CHD2	chr5:103416146-103416295	K562	blood:	n/a	n/a
48	CTCF	chr5:103385597-103385649	Hela-S3	cervix:	n/a	n/a
49	CTCF	chr5:103344720-103344870	BE2_C	brain:	n/a	n/a
50	CTCF	chr5:103344780-103344930	HCPEpiC	choroid plexus:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr5:103329070-103329120	HUVEC	blood vessel:	n/a
2	chr5:103329070-103329120	LNCaP	prostate:	n/a
3	chr5:103329070-103329120	GM12892	blood:	n/a
4	chr5:103329070-103329120	Hepatocyte	liver:	n/a
5	chr5:103329070-103329120	RPTEC	kidney:	n/a
6	chr5:103329070-103329120	NH-A	brain:	n/a
7	chr5:103329070-103329120	NHDF-neo	bronchial:	n/a
8	chr5:103329070-103329120	BE2_C	brain:	n/a
9	chr5:103329070-103329120	AG09319	gingival:	n/a
10	chr5:103329070-103329120	PFSK-1	brain:	n/a
11	chr5:103329070-103329120	AG04449	skin:	fetal
12	chr5:103329070-103329120	A549	lung:	n/a
13	chr5:103329070-103329120	HPAEpiC	pulmonary alveolar:	n/a
14	chr5:103329070-103329120	NT2-D1	testis:	n/a
15	chr5:103329070-103329120	HEEpiC	esophagus:	n/a
16	chr5:103329070-103329120	HRE	kidney:	n/a
17	chr5:103329070-103329120	SK-N-SH	brain:	n/a
18	chr5:103329070-103329120	IMR90	lung:	fetal
19	chr5:103329070-103329120	MCF-7	breast:	n/a
20	chr5:103329070-103329120	GM12891	blood:	n/a
21	chr5:103329070-103329120	HCPEpiC	choroid plexus:	n/a
22	chr5:103329070-103329120	MCF10A-Er-Src	breast:	n/a
23	chr5:103329070-103329120	NHBE	bronchial:	n/a
24	chr5:103329070-103329120	SK-N-SH_RA	brain:	n/a
25	chr5:103329070-103329120	ECC-1	luminal epithelium:	n/a
26	chr5:103329070-103329120	Caco-2	colon:	n/a
27	chr5:103329070-103329120	CMK	blood:	n/a
28	chr5:103329070-103329120	HNPCEpiC	eye:	n/a
29	chr5:103329070-103329120	HAEpiC	amniotic membrane:	n/a
30	chr5:103329070-103329120	HCF	heart:	n/a
31	chr5:103329070-103329120	PANC-1	pancreas:	n/a
32	chr5:103329070-103329120	U87	brain:	n/a
33	chr5:103329070-103329120	T-47D	breast:	n/a
34	chr5:103329070-103329120	NB4	blood:	n/a
35	chr5:103329070-103329120	K562	blood:	n/a
36	chr5:103329070-103329120	H1-hESC	embryonic stem cell:	embryo
37	chr5:103329070-103329120	GM19239	blood:	n/a
38	chr5:103329070-103329120	HEK293	kidney:	embryo
39	chr5:103329070-103329120	HCM	heart:	n/a
40	chr5:103329070-103329120	SKMC	muscle:	n/a
41	chr5:103329070-103329120	AoSMC	blood vessel:	n/a
42	chr5:103329070-103329120	HL-60	blood:	n/a
43	chr5:103329070-103329120	HIPEpiC	eye:	n/a
44	chr5:103329070-103329120	Hela-S3	cervix:	n/a
45	chr5:103329070-103329120	ovcar-3	ovarian:	n/a
46	chr5:103329070-103329120	AG09309	skin:	n/a
47	chr5:103329070-103329120	GM12878	blood:	n/a
48	chr5:103329070-103329120	AG04450	lung:	fetal
49	chr5:103329070-103329120	GM06990	blood:	n/a
50	chr5:103329070-103329120	HRCEpiC	kidney:	n/a

No.	Distal block	Cell Line	Cell type
1	chr5:103380875..103382995-chr5:103388672..103391460,2	MCF-7	breast:
2	chr5:103380875..103382995-chr5:103388672..103391460,2	MCF-7	breast:
3	chr5:103431462..103433805-chr5:103436805..103438651,2	K562	blood:
4	chr5:103375510..103378276-chr5:103379143..103380919,2	K562	blood:
5	chr5:103424892..103429270-chr5:103431386..103433912,4	K562	blood:
6	chr5:103318857..103321649-chr5:103330625..103332351,2	K562	blood:
7	chr5:103345748..103348145-chr5:103348952..103350632,2	MCF-7	breast:
8	chr5:103424304..103427061-chr5:103434256..103435929,2	K562	blood:
9	chr5:103375510..103378276-chr5:103379143..103380919,2	K562	blood:
10	chr5:103440945..103442591-chr5:103463038..103465422,2	K562	blood:
11	chr5:103424379..103427080-chr5:103428532..103430854,2	K562	blood:
12	chr5:102593172..102596932-chr5:103420035..103422975,3	K562	blood:
13	chr5:103368340..103370604-chr5:103378682..103380421,2	K562	blood:
14	chr5:103424892..103427295-chr5:103431386..103434334,3	K562	blood:
15	chr5:103424379..103427080-chr5:103428532..103430854,2	K562	blood:
16	chr5:103424892..103429270-chr5:103431386..103433912,4	K562	blood:
17	chr5:103406028..103408953-chr5:103419618..103421464,2	K562	blood:
18	chr5:103432374..103435053-chr5:103436419..103438700,3	MCF-7	breast:
19	chr5:103414629..103417722-chr5:103419240..103423591,5	K562	blood:
20	chr5:103249220..103251663-chr5:103417841..103420142,2	K562	blood:
21	chr5:44578647..44579149-chr5:103415633..103416333,2	Hela-S3	cervix:
22	chr5:103345748..103348145-chr5:103348952..103350632,2	MCF-7	breast:
23	chr5:103416241..103417960-chr5:103419579..103421622,2	MCF-7	breast:
24	chr5:103427770..103429780-chr5:103432412..103434956,2	K562	blood:
25	chr5:103438292..103439842-chr5:103445545..103447443,2	MCF-7	breast:
26	chr5:103419555..103422324-chr5:103423618..103426898,4	K562	blood:
27	chr5:103350349..103353256-chr5:103356744..103358667,2	K562	blood:
28	chr5:103416241..103417960-chr5:103419579..103421622,2	MCF-7	breast:
29	chr5:103419555..103422324-chr5:103423618..103426898,4	K562	blood:
30	chr12:112035976..112038316-chr5:103433179..103435078,2	MCF-7	breast:
31	chr5:103350349..103353256-chr5:103356744..103358667,2	K562	blood:
32	chr5:103368340..103370604-chr5:103378682..103380421,2	K562	blood:
33	chr5:103318857..103321649-chr5:103330625..103332351,2	K562	blood:
34	chr5:103343568..103345727-chr5:103350529..103352684,2	K562	blood:
35	chr5:103406028..103408953-chr5:103419618..103421464,2	K562	blood:
36	chr5:103431462..103433805-chr5:103436805..103438651,2	K562	blood:
37	chr5:103343568..103345727-chr5:103350529..103352684,2	K562	blood:
38	chr5:103424892..103427295-chr5:103431386..103434334,3	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C5orf30-1	chr5:103417581-103417648	ENSG00000251026
2	lnc-C5orf30-7	chr5:103404720-103405076	NONHSAT103072
3	lnc-C5orf30-1	chr5:103416609-103416742	ENSG00000251026
4	lnc-C5orf30-1	chr5:103441061-103441104	ENSG00000251026
5	lnc-C5orf30-1	chr5:103415612-103415825	ENSG00000251026
6	lnc-C5orf30-1	chr5:103441061-103443042	NONHSAT147352
7	lnc-C5orf30-1	chr5:103439875-103439988	ENSG00000251026
8	lnc-C5orf30-7	chr5:103402464-103402570	NONHSAT103072
9	lnc-C5orf30-1	chr5:103439963-103439988	NONHSAT147352

Variant related genes	Relation type
ENSG00000251026	TF binding region
RNU1-140P	TF binding region
ENSG00000251026	CpG island
RNU1-140P	CpG island
ENSG00000251026	chromatin interactions
ENSG00000201910	chromatin interactions
ENSG00000204842	chromatin interactions
ENSG00000181751	chromatin interactions
ENSG00000258099	chromatin interactions

Extended variants
information (count: 4026 )
Associated
traits (count: 79 )

Variant overlapped rSNPs/rCNVs (count:4026 , 50 per page) page: 1 2 3 4 5 6 7 ... 81

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs566695192	chr5:103320230-103320231	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs190274028	chr5:103320241-103320242	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs534726705	chr5:103320258-103320259	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs572952686	chr5:103320300-103320301	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs539079412	chr5:103320319-103320320	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs552835470	chr5:103320412-103320413	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs558823373	chr5:103320434-103320435	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs539598293	chr5:103320455-103320456	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs575589359	chr5:103320531-103320532	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs181264173	chr5:103320546-103320547	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs150450775	chr5:103320565-103320566	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs377540538	chr5:103320566-103320567	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs575160296	chr5:103320595-103320596	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs369426167	chr5:103320609-103320610	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs560629560	chr5:103320652-103320653	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs538210391	chr5:103320653-103320654	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs186129202	chr5:103320702-103320703	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs564859293	chr5:103320703-103320704	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs576025304	chr5:103320729-103320730	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs530510192	chr5:103320766-103320767	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs190934885	chr5:103320767-103320768	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs574475113	chr5:103320798-103320799	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs577842243	chr5:103320833-103320834	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs377160569	chr5:103320839-103320840	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs184038116	chr5:103320885-103320886	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs545302319	chr5:103320927-103320928	Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs187816854	chr5:103320942-103320943	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs536093399	chr5:103320977-103320978	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs546496515	chr5:103321000-103321001	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs115268194	chr5:103321005-103321006	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs572387406	chr5:103321045-103321046	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs190777307	chr5:103321050-103321051	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs575626482	chr5:103321060-103321061	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs56409322	chr5:103321080-103321081	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs538367009	chr5:103321083-103321084	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs73194781	chr5:103321099-103321100	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs574895911	chr5:103321105-103321106	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs555455139	chr5:103321119-103321120	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs551886021	chr5:103321120-103321121	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs200022725	chr5:103321140-103321141	Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs560670550	chr5:103321148-103321149	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs577347981	chr5:103321163-103321164	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs564278235	chr5:103321166-103321167	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs319136	chr5:103321193-103321194	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs554499103	chr5:103327000-103327001	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs577731410	chr5:103327014-103327015	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs146709221	chr5:103327029-103327030	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs545074770	chr5:103327058-103327059	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs553885595	chr5:103327080-103327081	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs546204948	chr5:103327094-103327095	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:79)

Disease	PMID	Source
Metanephric adenoma	20802469	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Medulloblastoma	21979893	CNVD
Phyllodes tumor	17334353	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Cancer	16751803	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Melanoma	18172304	CNVD
Glioma	20126413	CNVD
Breast cancer	17393978	CNVD
Cancer	21359685	CNVD
Non-small cell lung cancer	21829676	CNVD
adenomatous polyposis	22470819	CNVD
Cancer	22429812	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Liposarcoma	21253554	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Breast cancer	21858162	CNVD
Leukemia	17361228	CNVD
Myelodysplastic syndrome	18508791	CNVD
5q-syndrome	17576883	CNVD
Gastric cancer	17908304	CNVD
Lung cancer	16740712	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Urothelial carcinoma	21177765	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Barrett''s syndrome	19417022	CNVD
Lung cancer	18438408	CNVD
Retinoblastoma	22278416	CNVD
Bipolar disorder	18458673	CNVD
Thyroid cancer	19087340	CNVD
Breast cancer	21785460	CNVD
Squamous cell cancer	20885788	CNVD
Hepatocellular carcinoma	16750200	CNVD
Neurodevelopmental disorder	22521361	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	17133270	CNVD
Acute myeloid leukemia	20729466	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Acute myeloid leukemia	21251322	CNVD
lymphocytic leukemia	21291569	CNVD
Colorectal cancer	16272173	CNVD
Prostate cancer	16573809	CNVD
Renal cell carcinoma	18194544	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Cancer	20164920	CNVD
Myelodysplastic syndrome	21251322	CNVD
abnormal development	18461090	CNVD
Colorectal cancer	16774939	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Multiple myeloma	17550852	CNVD
Myelofibrosis	22110671	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Ovarian cancer	21720365	CNVD
Neurocytoma	17123091	CNVD
Salivary gland tumor	18059337	CNVD
Breast cancer	21509527	CNVD
Breast cancer	16608533	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:143 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:103320200-103321200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr5:103327000-103327200	Enhancers	ES-WA7 Cell Line	embryonic stem cell
3	chr5:103327000-103327200	Enhancers	HUES48 Cell Line	embryonic stem cell
4	chr5:103327200-103328800	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
5	chr5:103327400-103328400	Weak transcription	HUES48 Cell Line	embryonic stem cell
6	chr5:103328400-103330400	Enhancers	HUES64 Cell Line	embryonic stem cell
7	chr5:103328400-103331200	Enhancers	HUES48 Cell Line	embryonic stem cell
8	chr5:103328600-103330000	Enhancers	HUES6 Cell Line	embryonic stem cell
9	chr5:103328600-103330400	Enhancers	iPS-18 Cell Line	embryonic stem cell
10	chr5:103328800-103330000	Enhancers	ES-WA7 Cell Line	embryonic stem cell
11	chr5:103328800-103330200	Enhancers	iPS-15b Cell Line	embryonic stem cell
12	chr5:103328800-103330200	Enhancers	iPS-20b Cell Line	embryonic stem cell
13	chr5:103329000-103330000	Enhancers	ES-I3 Cell Line	embryonic stem cell
14	chr5:103330200-103330800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
15	chr5:103330400-103330800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
16	chr5:103330800-103331000	Enhancers	iPS-15b Cell Line	embryonic stem cell
17	chr5:103330800-103331400	Enhancers	iPS-18 Cell Line	embryonic stem cell
18	chr5:103331200-103337000	Weak transcription	Fetal Brain Male	brain
19	chr5:103335600-103336200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
20	chr5:103337000-103337800	Enhancers	Fetal Brain Male	brain
21	chr5:103339400-103340600	Enhancers	Fetal Lung	lung
22	chr5:103339800-103340600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
23	chr5:103340000-103340400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
24	chr5:103340600-103343800	Weak transcription	Fetal Lung	lung
25	chr5:103342400-103342600	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
26	chr5:103343200-103344800	Enhancers	iPS-20b Cell Line	embryonic stem cell
27	chr5:103343400-103345000	Enhancers	iPS-18 Cell Line	embryonic stem cell
28	chr5:103343800-103344200	Enhancers	ES-WA7 Cell Line	embryonic stem cell
29	chr5:103343800-103344200	Enhancers	Fetal Lung	lung
30	chr5:103343800-103344800	Enhancers	HUES6 Cell Line	embryonic stem cell
31	chr5:103343800-103345000	Enhancers	ES-I3 Cell Line	embryonic stem cell
32	chr5:103343800-103345000	Enhancers	HUES48 Cell Line	embryonic stem cell
33	chr5:103343800-103345000	Enhancers	HUES64 Cell Line	embryonic stem cell
34	chr5:103344200-103344800	Enhancers	iPS-15b Cell Line	embryonic stem cell
35	chr5:103351600-103353000	Enhancers	Muscle Satellite Cultured Cells	--
36	chr5:103352000-103352600	Enhancers	Osteobl	bone
37	chr5:103353000-103355200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
38	chr5:103353200-103353400	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
39	chr5:103355000-103356800	Enhancers	Fetal Brain Male	brain
40	chr5:103356800-103359800	Weak transcription	Fetal Brain Male	brain
41	chr5:103359800-103361200	Enhancers	Fetal Brain Male	brain
42	chr5:103366400-103368200	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
43	chr5:103366800-103367000	ZNF genes & repeats	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
44	chr5:103367000-103368200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
45	chr5:103368200-103369200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
46	chr5:103369200-103369400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
47	chr5:103369200-103370000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
48	chr5:103369400-103372400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
49	chr5:103370000-103370400	Active TSS	ES-I3 Cell Line	embryonic stem cell
50	chr5:103370000-103370400	Active TSS	H9 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links