Variant report

Variant nsv1027959
Chromosome Location chr5:104541551-104661834
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:104541800-104542600 Enhancers Brain Germinal Matrix brain
2 chr5:104550000-104550400 Enhancers HUES48 Cell Line embryonic stem cell
3 chr5:104550200-104550600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr5:104550200-104550600 Enhancers HUES6 Cell Line embryonic stem cell
5 chr5:104550200-104550600 Enhancers iPS-20b Cell Line embryonic stem cell
6 chr5:104550200-104550800 Enhancers ES-I3 Cell Line embryonic stem cell
7 chr5:104550400-104550600 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr5:104550600-104552600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
9 chr5:104550800-104554800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr5:104552600-104553600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr5:104553000-104553800 Enhancers Brain Germinal Matrix brain
12 chr5:104553200-104554200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr5:104553600-104555200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
14 chr5:104554200-104554600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr5:104554600-104555400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
16 chr5:104554800-104555200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
17 chr5:104555000-104556600 Enhancers Primary hematopoietic stem cells blood
18 chr5:104555200-104555400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr5:104555400-104555800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr5:104555800-104557400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr5:104556200-104556600 Active TSS Primary T helper cells PMA-I stimulated --
22 chr5:104565200-104565400 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr5:104565400-104565800 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr5:104565600-104566600 Enhancers K562 blood
25 chr5:104565800-104566800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
26 chr5:104565800-104566800 Enhancers Colon Smooth Muscle Colon
27 chr5:104566000-104566400 Enhancers Primary hematopoietic stem cells short term culture blood
28 chr5:104566200-104566800 Enhancers Fetal Lung lung
29 chr5:104566800-104567600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr5:104567600-104567800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr5:104575600-104576000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr5:104576000-104581000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr5:104581000-104581200 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr5:104581200-104581400 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
35 chr5:104581200-104581600 Enhancers HUES48 Cell Line embryonic stem cell
36 chr5:104594000-104594200 ZNF genes & repeats K562 blood
37 chr5:104594200-104597600 Weak transcription K562 blood
38 chr5:104595000-104596000 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
39 chr5:104595200-104595800 Enhancers ES-I3 Cell Line embryonic stem cell
40 chr5:104595200-104595800 Enhancers HUES48 Cell Line embryonic stem cell
41 chr5:104595200-104596000 Enhancers HUES6 Cell Line embryonic stem cell
42 chr5:104597600-104598400 Enhancers K562 blood
43 chr5:104598400-104598800 Weak transcription K562 blood
44 chr5:104598800-104599600 Enhancers K562 blood
45 chr5:104626800-104627600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr5:104627600-104628400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr5:104628400-104629200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr5:104629200-104629600 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr5:104629600-104630000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr5:104630000-104630200 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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