Variant report

Variant	nsv1028288
Chromosome Location	chr8:92124763-92186057
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:135)
CpG islands
(count:245)
Chromatin interactive
region (count:17)
LncRNA
region (count:9)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:135 , 50 per page) page: 1 2 3

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr8:92130895-92131095	HepG2	liver:	n/a	n/a
2	ATF1	chr8:92126805-92126814	K562	blood:	n/a	n/a
3	ATF2	chr8:92157649-92158115	GM12878	blood:	n/a	n/a
4	BACH1	chr8:92130210-92130270	H1-hESC	embryonic stem cell:	n/a	n/a
5	CEBPB	chr8:92164320-92164536	A549	lung:	n/a	n/a
6	CEBPB	chr8:92130918-92131377	IMR90	lung:	n/a	n/a
7	CEBPB	chr8:92148653-92148976	IMR90	lung:	n/a	chr8:92148804-92148815
8	CEBPB	chr8:92148613-92148967	MCF-7	breast:	n/a	chr8:92148804-92148815
9	CEBPB	chr8:92152325-92152560	IMR90	lung:	n/a	chr8:92152445-92152458 chr8:92152447-92152456 chr8:92152447-92152456 chr8:92152445-92152458 chr8:92152447-92152456 chr8:92152447-92152456 chr8:92152447-92152458 chr8:92152445-92152456 chr8:92152447-92152458
10	CEBPB	chr8:92148641-92148988	K562	blood:	n/a	chr8:92148804-92148815
11	CEBPB	chr8:92152343-92152575	HepG2	liver:	n/a	chr8:92152445-92152458 chr8:92152447-92152456 chr8:92152447-92152456 chr8:92152445-92152458 chr8:92152447-92152456 chr8:92152447-92152456 chr8:92152447-92152458 chr8:92152445-92152456 chr8:92152447-92152458
12	CEBPB	chr8:92148557-92148979	MCF-7	breast:	n/a	chr8:92148804-92148815
13	CEBPB	chr8:92148672-92148965	HepG2	liver:	n/a	chr8:92148804-92148815
14	CHD2	chr8:92179540-92179627	K562	blood:	n/a	n/a
15	CREB1	chr8:92157732-92158202	GM12878	blood:	n/a	n/a
16	CTCF	chr8:92129980-92130130	AG04449	skin:	n/a	n/a
17	CTCF	chr8:92142688-92142737	Kidney_OC	kidney:	n/a	n/a
18	CTCF	chr8:92130020-92130170	NHDF-neo	bronchial:	n/a	n/a
19	CTCF	chr8:92129880-92130030	BJ	skin:	n/a	n/a
20	CTCF	chr8:92129900-92130050	AG04449	skin:	n/a	n/a
21	CTCF	chr8:92152201-92152298	LNCaP	prostate:	n/a	n/a
22	CTCF	chr8:92129960-92130110	AG10803	skin:	n/a	n/a
23	CTCF	chr8:92129940-92130090	HBMEC	blood vessel:	n/a	n/a
24	CTCF	chr8:92129900-92130050	AG10803	skin:	n/a	n/a
25	CTCF	chr8:92129900-92130050	BJ	skin:	n/a	n/a
26	CTCF	chr8:92129920-92130070	AG09309	skin:	n/a	n/a
27	CTCF	chr8:92175640-92175790	HEEpiC	esophagus:	n/a	n/a
28	E2F4	chr8:92135075-92135076	MCF10A-Er-Src	breast:	n/a	n/a
29	EBF1	chr8:92156113-92156168	GM12878	blood:	n/a	n/a
30	EBF1	chr8:92156447-92156478	GM12878	blood:	n/a	n/a
31	ELK1	chr8:92134779-92134796	Hela-S3	cervix:	n/a	n/a
32	EP300	chr8:92139786-92140085	SK-N-SH_RA	brain:	n/a	n/a
33	EP300	chr8:92157728-92158077	SK-N-SH_RA	brain:	n/a	n/a
34	EP300	chr8:92139060-92140427	SK-N-SH	brain:	n/a	chr8:92140353-92140361 chr8:92139785-92139799
35	EP300	chr8:92128370-92128485	GM12878	blood:	n/a	n/a
36	EP300	chr8:92131000-92131301	HepG2	liver:	n/a	n/a
37	EP300	chr8:92139809-92140120	SK-N-SH_RA	brain:	n/a	n/a
38	FAM48A	chr8:92136960-92137122	GM12878	blood:	n/a	n/a
39	FAM48A	chr8:92149941-92150062	GM12878	blood:	n/a	n/a
40	FAM48A	chr8:92131930-92132048	GM12878	blood:	n/a	n/a
41	FOS	chr8:92157833-92158085	MCF10A-Er-Src	breast:	n/a	n/a
42	FOS	chr8:92131052-92131326	MCF10A-Er-Src	breast:	n/a	n/a
43	FOS	chr8:92131022-92131359	MCF10A-Er-Src	breast:	n/a	n/a
44	FOS	chr8:92131072-92131360	MCF10A-Er-Src	breast:	n/a	n/a
45	FOSL2	chr8:92130912-92131418	SK-N-SH	brain:	n/a	n/a
46	FOXA1	chr8:92179603-92180012	HepG2	liver:	n/a	n/a
47	FOXA1	chr8:92169594-92169944	T-47D	breast:	n/a	n/a
48	FOXA1	chr8:92179654-92180044	HepG2	liver:	n/a	n/a
49	FOXA1	chr8:92179634-92180014	HepG2	liver:	n/a	n/a
50	FOXM1	chr8:92157768-92158122	GM12878	blood:	n/a	n/a

(count:245 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr8:92129661-92129711	K562	blood:	n/a
2	chr8:92129661-92129711	K562	blood:	n/a
3	chr8:92177481-92177531	SK-N-SH	brain:	n/a
4	chr8:92130454-92130504	NHBE	bronchial:	n/a
5	chr8:92129661-92129711	ovcar-3	ovarian:	n/a
6	chr8:92129661-92129711	HCF	heart:	n/a
7	chr8:92130025-92130075	HPAEpiC	pulmonary alveolar:	n/a
8	chr8:92130454-92130504	NHDF-neo	bronchial:	n/a
9	chr8:92130025-92130075	AG04449	skin:	fetal
10	chr8:92129661-92129711	Jurkat	blood:	n/a
11	chr8:92130454-92130504	GM12891	blood:	n/a
12	chr8:92130454-92130504	HepG2	liver:	n/a
13	chr8:92130454-92130504	MCF10A-Er-Src	breast:	n/a
14	chr8:92130025-92130075	SKMC	muscle:	n/a
15	chr8:92177481-92177531	HCF	heart:	n/a
16	chr8:92130454-92130504	HEEpiC	esophagus:	n/a
17	chr8:92177481-92177531	GM12878	blood:	n/a
18	chr8:92130025-92130075	CMK	blood:	n/a
19	chr8:92130025-92130075	HAEpiC	amniotic membrane:	n/a
20	chr8:92130454-92130504	ProgFib	skin:	n/a
21	chr8:92130025-92130075	NHDF-neo	bronchial:	n/a
22	chr8:92129661-92129711	HL-60	blood:	n/a
23	chr8:92130454-92130504	AG10803	skin:	n/a
24	chr8:92130454-92130504	BJ	skin:	n/a
25	chr8:92129661-92129711	HNPCEpiC	eye:	n/a
26	chr8:92130454-92130504	ECC-1	luminal epithelium:	n/a
27	chr8:92177481-92177531	GM06990	blood:	n/a
28	chr8:92130454-92130504	LNCaP	prostate:	n/a
29	chr8:92177481-92177531	A549	lung:	n/a
30	chr8:92130454-92130504	A549	lung:	n/a
31	chr8:92130025-92130075	AG09319	gingival:	n/a
32	chr8:92177481-92177531	T-47D	breast:	n/a
33	chr8:92130454-92130504	GM19239	blood:	n/a
34	chr8:92130454-92130504	ovcar-3	ovarian:	n/a
35	chr8:92130454-92130504	HRCEpiC	kidney:	n/a
36	chr8:92130025-92130075	HRPEpiC	eye:	n/a
37	chr8:92177481-92177531	Jurkat	blood:	n/a
38	chr8:92129661-92129711	H1-hESC	embryonic stem cell:	embryo
39	chr8:92177481-92177531	GM12891	blood:	n/a
40	chr8:92130454-92130504	NH-A	brain:	n/a
41	chr8:92130454-92130504	SKMC	muscle:	n/a
42	chr8:92177481-92177531	Hepatocyte	liver:	n/a
43	chr8:92130025-92130075	MCF10A-Er-Src	breast:	n/a
44	chr8:92130454-92130504	NB4	blood:	n/a
45	chr8:92129661-92129711	SK-N-SH_RA	brain:	n/a
46	chr8:92129661-92129711	HEEpiC	esophagus:	n/a
47	chr8:92177481-92177531	PFSK-1	brain:	n/a
48	chr8:92130025-92130075	SAEC	small airway:	n/a
49	chr8:92130454-92130504	HCF	heart:	n/a
50	chr8:92129661-92129711	SK-N-MC	brain:	n/a

(count:17 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr8:92120884..92123955-chr8:92135517..92137332,3	K562	blood:
2	chr8:92148959..92151184-chr8:92158932..92161122,2	K562	blood:
3	chr8:92150726..92152514-chr8:92154521..92157433,2	MCF-7	breast:
4	chr8:92155872..92157525-chr8:92209191..92211411,2	K562	blood:
5	chr8:92144011..92145737-chr8:92157940..92159530,2	K562	blood:
6	chr8:92134168..92136932-chr8:92139678..92141512,2	MCF-7	breast:
7	chr8:92132436..92135251-chr8:92135477..92137033,2	K562	blood:
8	chr8:92144011..92145737-chr8:92157940..92159530,2	K562	blood:
9	chr8:92119859..92121552-chr8:92126272..92127780,2	K562	blood:
10	chr8:92154407..92157062-chr8:92186719..92188314,2	K562	blood:
11	chr8:92134168..92136932-chr8:92139678..92141512,2	MCF-7	breast:
12	chr8:92117994..92121552-chr8:92125286..92129221,4	K562	blood:
13	chr8:92052048..92053750-chr8:92131275..92133087,2	K562	blood:
14	chr8:92120884..92123342-chr8:92135640..92137332,2	K562	blood:
15	chr8:92148959..92151184-chr8:92158932..92161122,2	K562	blood:
16	chr8:92185616..92187449-chr8:92210169..92211682,2	K562	blood:
17	chr8:92132436..92135251-chr8:92135477..92137033,2	K562	blood:

(count:9 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-OTUD6B-5	chr8:92147909-92147967	NONHSAT127673
2	lnc-OTUD6B-3	chr8:92136721-92137011	NONHSAT127671
3	lnc-OTUD6B-6	chr8:92151489-92151751	NONHSAT127674
4	lnc-OTUD6B-4	chr8:92142582-92142645	NONHSAT127672
5	lnc-TMEM55A-4	chr8:92149320-92151226	ucscGeneNc_uc003yet_1
6	lnc-OTUD6B-4	chr8:92145338-92145592	NONHSAT127672
7	lnc-TMEM55A-4	chr8:92151335-92151500	ucscGeneNc_uc003yet_1
8	lnc-OTUD6B-4	chr8:92142987-92143064	NONHSAT127672
9	lnc-OTUD6B-5	chr8:92150995-92151423	NONHSAT127673

No data

Variant related genes	Relation type
RN7SL777P	TF binding region
ENSG00000253525	TF binding region
LRRC69	TF binding region
RN7SL777P	CpG island
ENSG00000253525	CpG island
LRRC69	CpG island
ENSG00000263888	chromatin interactions
ENSG00000155099	chromatin interactions

Extended variants
information (count: 1667 )
Associated
traits (count: 118 )

Variant overlapped rSNPs/rCNVs (count:1667 , 50 per page) page: 1 2 3 4 5 6 7 ... 34

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs10091041	chr8:92124763-92124764	Weak transcription ZNF genes & repeats Strong transcription Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs143339176	chr8:92124807-92124808	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs562845637	chr8:92124845-92124846	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs35728558	chr8:92124866-92124867	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs79190223	chr8:92124882-92124883	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs552825661	chr8:92124915-92124916	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs560747160	chr8:92124936-92124937	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs553165533	chr8:92124942-92124943	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs542213969	chr8:92124953-92124954	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs182234070	chr8:92124957-92124958	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs375266778	chr8:92125029-92125030	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs116454560	chr8:92125080-92125081	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs557503873	chr8:92125091-92125092	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs560685465	chr8:92125095-92125096	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs575840403	chr8:92125139-92125140	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs531285922	chr8:92125194-92125195	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs183794209	chr8:92125200-92125201	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs568138102	chr8:92125205-92125206	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs571122130	chr8:92125236-92125237	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs532448403	chr8:92125247-92125248	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs566305233	chr8:92125349-92125350	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs565963625	chr8:92125359-92125360	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs536492897	chr8:92125361-92125362	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs188280657	chr8:92125366-92125367	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs10094656	chr8:92125389-92125390	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
26	rs538311833	chr8:92125421-92125422	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs556533688	chr8:92125454-92125455	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs371686530	chr8:92125466-92125467	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs146731758	chr8:92125479-92125480	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs76021458	chr8:92125520-92125521	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs572390920	chr8:92125544-92125545	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs542841974	chr8:92125570-92125571	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs545440202	chr8:92125641-92125642	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs561118842	chr8:92125700-92125701	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs181415331	chr8:92125702-92125703	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs532324409	chr8:92125768-92125769	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs185634221	chr8:92125789-92125790	Weak transcription ZNF genes & repeats Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs191984382	chr8:92125809-92125810	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs547361395	chr8:92125812-92125813	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs532631589	chr8:92125827-92125828	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs540976750	chr8:92125842-92125843	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs535215182	chr8:92125885-92125886	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs557459962	chr8:92125899-92125900	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs529992388	chr8:92125937-92125938	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs374609890	chr8:92125941-92125942	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs75104064	chr8:92125949-92125950	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs142790470	chr8:92126010-92126011	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs569829517	chr8:92126011-92126012	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs548937532	chr8:92126072-92126073	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs181797603	chr8:92126089-92126090	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:118)

Disease	PMID	Source
Wilms tumour	21544195	CNVD
Gastric cancer	17908304	CNVD
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Ewing''s sarcoma	21437220	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
Thoracic aortic aneurysm	21092924	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
lymphocytic leukemia	21291569	CNVD
Liver carcinoma	19366792	CNVD
Seminomas	18059402	CNVD
Autism	22495311	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Pancreatic cancer	21811587	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	17603634	CNVD
Testicular cancer	18059402	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
Cancer	20164919	CNVD
Esophageal cancer	20955586	CNVD
Multiple myeloma	16461302	CNVD
abnormal development	18461090	CNVD
Oral cancer	21386901	CNVD
Uveal melanoma	21693616	CNVD
Langer-Giedion syndrome	22283845	CNVD
Cancer	21637783	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	20632083	CNVD
Breast cancer	19602461	CNVD
Cancer	22429812	CNVD
Endometrial cancer	22040021	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	19627613	CNVD
Prostate cancer	21088497	CNVD
colon cancer	17210682	CNVD
Breast cancer	21264507	CNVD
Breast cancer	22028636	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	16751803	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Gastric cancer	17167181	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	16461572	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
head and neck squamous cell carcinoma	18028549	CNVD
Breast cancer	17001317	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ewing''s sarcoma	17952124	CNVD
Urothelial carcinoma	21177765	CNVD
Lung cancer	18438408	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Hepatocellular carcinoma	18803288	CNVD
Prostate cancer	18632612	CNVD
Glioblastoma multiforme	18628472	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	16573809	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Cancer	21949371	CNVD
Non-small cell lung cancer	21829676	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Acute myeloid leukemia	21358987	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Adenocarcinoma	21044232	CNVD
Squamous cell cancer	20885788	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	21399628	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
small cell lung cancer	20016488	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	17393978	CNVD
Burkitt''s lymphoma	18698080	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Bladder cancer	19088036	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17899364	CNVD
Acute myeloid leukemia	21251322	CNVD
Epilepsy	20502679	CNVD
Breast cancer	20409316	CNVD
Acute myeloid leukemia	19651601	CNVD
head and neck squamous cell carcinoma	19451471	CNVD
Renal cell carcinoma	18765545	CNVD
Basal cell lymphoma	17170743	CNVD
Cutaneous T-cell lymphoma	21881587	CNVD
Breast cancer	21611746	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
early-passage human iPS cells	21368824	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Colorectal cancer	21645411	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Gastric cancer	22014070	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Schizophrenia	23813976	CNVD

Chromatin state (count:268 , 50 per page) page: 1 2 3 4 5 6

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:92083000-92147800	Weak transcription	Spleen	Spleen
2	chr8:92083600-92150800	Weak transcription	Pancreas	Pancrea
3	chr8:92085000-92125800	Weak transcription	Small Intestine	intestine
4	chr8:92091200-92133800	Weak transcription	NHLF	lung
5	chr8:92091800-92137800	Weak transcription	Rectal Smooth Muscle	rectum
6	chr8:92092600-92147800	Weak transcription	Right Ventricle	heart
7	chr8:92094200-92125200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
8	chr8:92095200-92130800	Weak transcription	HSMMtube	muscle
9	chr8:92095800-92126600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
10	chr8:92096800-92135000	Weak transcription	Hela-S3	cervix
11	chr8:92097200-92127000	Weak transcription	Colon Smooth Muscle	Colon
12	chr8:92097400-92126400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
13	chr8:92097400-92130800	Weak transcription	Osteobl	bone
14	chr8:92097400-92146200	Weak transcription	Psoas Muscle	Psoas
15	chr8:92100800-92130800	Weak transcription	Muscle Satellite Cultured Cells	--
16	chr8:92104600-92126000	Weak transcription	Fetal Intestine Large	intestine
17	chr8:92104600-92129600	Weak transcription	Brain Anterior Caudate	brain
18	chr8:92104800-92125400	Weak transcription	Fetal Muscle Trunk	muscle
19	chr8:92104800-92126200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
20	chr8:92104800-92130600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
21	chr8:92104800-92134200	Weak transcription	Thymus	Thymus
22	chr8:92104800-92148000	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
23	chr8:92105800-92125800	Weak transcription	H9 Cell Line	embryonic stem cell
24	chr8:92106000-92125800	Weak transcription	iPS-18 Cell Line	embryonic stem cell
25	chr8:92106000-92126400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
26	chr8:92106800-92127400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
27	chr8:92107200-92141000	Weak transcription	HMEC	breast
28	chr8:92109200-92147600	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
29	chr8:92110000-92124800	Weak transcription	H1 Cell Line	embryonic stem cell
30	chr8:92110000-92127400	Weak transcription	HUES48 Cell Line	embryonic stem cell
31	chr8:92110200-92128000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
32	chr8:92110400-92125600	Weak transcription	Fetal Muscle Leg	muscle
33	chr8:92110800-92126800	Weak transcription	Fetal Stomach	stomach
34	chr8:92111000-92126400	Weak transcription	Cortex derived primary cultured neurospheres	brain
35	chr8:92111600-92125400	Weak transcription	HUES6 Cell Line	embryonic stem cell
36	chr8:92111600-92127600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
37	chr8:92111600-92140800	Weak transcription	Brain Substantia Nigra	brain
38	chr8:92113600-92126000	Weak transcription	Fetal Intestine Small	intestine
39	chr8:92114800-92125800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
40	chr8:92115000-92125000	Strong transcription	Primary T cells fromperipheralblood	blood
41	chr8:92115400-92147800	Weak transcription	Esophagus	oesophagus
42	chr8:92115600-92129600	Weak transcription	Sigmoid Colon	Sigmoid Colon
43	chr8:92117200-92140000	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
44	chr8:92118200-92130800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
45	chr8:92118400-92139000	Weak transcription	Stomach Smooth Muscle	stomach
46	chr8:92118600-92126600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
47	chr8:92118800-92126200	Weak transcription	Fetal Kidney	kidney
48	chr8:92119200-92125200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
49	chr8:92120000-92125200	Strong transcription	Primary monocytes fromperipheralblood	blood
50	chr8:92120200-92125000	Strong transcription	Primary T cells from cord blood	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links