Variant report

Variant	nsv1028586
Chromosome Location	chr6:57489667-58055199
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1628)
CpG islands
(count:549)
Chromatin interactive
region (count:15)
LncRNA
region (count:10)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1628 , 50 per page) page: 1 2 3 4 5 6 7 ... 33

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF1	chr6:57529957-57530116	K562	blood:	n/a	n/a
2	ATF1	chr6:57573821-57574021	K562	blood:	n/a	n/a
3	ATF1	chr6:57618389-57618391	K562	blood:	n/a	n/a
4	ATF1	chr6:57996881-57996935	K562	blood:	n/a	n/a
5	BACH1	chr6:57501831-57501836	K562	blood:	n/a	n/a
6	BACH1	chr6:57541125-57541357	H1-hESC	embryonic stem cell:	n/a	n/a
7	BACH1	chr6:57545381-57545540	H1-hESC	embryonic stem cell:	n/a	n/a
8	BACH1	chr6:57526352-57526945	H1-hESC	embryonic stem cell:	n/a	n/a
9	BATF	chr6:57705851-57706122	GM12878	blood:	n/a	chr6:57706041-57706049
10	BATF	chr6:57705853-57706117	GM12878	blood:	n/a	chr6:57706041-57706049
11	BCL11A	chr6:57705843-57706108	GM12878	blood:	n/a	n/a
12	BCL11A	chr6:57705880-57706094	GM12878	blood:	n/a	n/a
13	BHLHE40	chr6:57519324-57519409	K562	blood:	n/a	n/a
14	BRCA1	chr6:57512603-57512632	GM12878	blood:	n/a	n/a
15	BRCA1	chr6:57554228-57554351	GM12878	blood:	n/a	n/a
16	BRCA1	chr6:57540290-57540327	GM12878	blood:	n/a	n/a
17	BRCA1	chr6:57489991-57490136	GM12878	blood:	n/a	n/a
18	BRCA1	chr6:57518070-57518209	HepG2	liver:	n/a	n/a
19	BRCA1	chr6:57535844-57535916	H1-hESC	embryonic stem cell:	n/a	n/a
20	BRCA1	chr6:57538781-57538788	GM12878	blood:	n/a	n/a
21	BRCA1	chr6:57540464-57540783	HepG2	liver:	n/a	n/a
22	BRCA1	chr6:57574332-57574500	GM12878	blood:	n/a	n/a
23	BRCA1	chr6:57500697-57500736	GM12878	blood:	n/a	n/a
24	BRCA1	chr6:57525275-57525333	GM12878	blood:	n/a	n/a
25	CBX3	chr6:57553568-57553847	HCT-116	colon:	n/a	n/a
26	CCNT2	chr6:57497968-57498977	K562	blood:	n/a	chr6:57498241-57498261 chr6:57498127-57498147
27	CEBPB	chr6:57501140-57501469	Hela-S3	cervix:	n/a	chr6:57501304-57501315
28	CEBPB	chr6:57498451-57498866	K562	blood:	n/a	chr6:57498628-57498641 chr6:57498629-57498640
29	CEBPB	chr6:57594574-57594773	HepG2	liver:	n/a	chr6:57594706-57594717
30	CEBPB	chr6:57813381-57813566	IMR90	lung:	n/a	chr6:57813503-57813514
31	CEBPB	chr6:57498429-57498817	IMR90	lung:	n/a	chr6:57498628-57498641 chr6:57498629-57498640
32	CEBPB	chr6:57837128-57837338	HepG2	liver:	n/a	chr6:57837142-57837155
33	CEBPB	chr6:57523828-57524120	HepG2	liver:	n/a	n/a
34	CEBPB	chr6:57611571-57611877	HepG2	liver:	n/a	chr6:57611723-57611734
35	CEBPB	chr6:57501205-57501429	MCF-7	breast:	n/a	chr6:57501304-57501315
36	CEBPB	chr6:57498379-57498946	MCF-7	breast:	n/a	chr6:57498628-57498641 chr6:57498629-57498640
37	CEBPB	chr6:58030489-58030521	HepG2	liver:	n/a	chr6:58030490-58030499 chr6:58030490-58030501 chr6:58030490-58030499 chr6:58030490-58030499 chr6:58030490-58030501 chr6:58030490-58030499
38	CEBPB	chr6:57498395-57498878	Hela-S3	cervix:	n/a	chr6:57498628-57498641 chr6:57498629-57498640
39	CEBPB	chr6:57524385-57524726	HepG2	liver:	n/a	chr6:57524559-57524570
40	CEBPB	chr6:57524376-57524707	A549	lung:	n/a	chr6:57524559-57524570
41	CEBPB	chr6:57498457-57498842	A549	lung:	n/a	chr6:57498628-57498641 chr6:57498629-57498640
42	CEBPB	chr6:57498341-57498931	MCF-7	breast:	n/a	chr6:57498628-57498641 chr6:57498629-57498640
43	CEBPB	chr6:57835893-57836113	H1-hESC	embryonic stem cell:	n/a	n/a
44	CEBPB	chr6:57662657-57662806	HepG2	liver:	n/a	n/a
45	CEBPB	chr6:57813456-57813566	A549	lung:	n/a	chr6:57813503-57813514
46	CEBPB	chr6:57538070-57538422	H1-hESC	embryonic stem cell:	n/a	n/a
47	CEBPB	chr6:57813363-57813589	HepG2	liver:	n/a	chr6:57813503-57813514
48	CEBPB	chr6:57678625-57678743	K562	blood:	n/a	chr6:57678645-57678662 chr6:57678650-57678661 chr6:57678648-57678661 chr6:57678648-57678659 chr6:57678648-57678661 chr6:57678650-57678661
49	CEBPB	chr6:57611670-57611837	IMR90	lung:	n/a	chr6:57611723-57611734
50	CEBPB	chr6:57678653-57678665	HepG2	liver:	n/a	n/a

(count:549 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:57614321-57614371	SK-N-SH	brain:	n/a
2	chr6:57614321-57614371	NT2-D1	testis:	n/a
3	chr6:57614321-57614371	PFSK-1	brain:	n/a
4	chr6:57912662-57912712	HPAEpiC	pulmonary alveolar:	n/a
5	chr6:57614321-57614371	LNCaP	prostate:	n/a
6	chr6:58001971-58002021	U87	brain:	n/a
7	chr6:57970666-57970716	HEK293	kidney:	embryo
8	chr6:57972680-57972730	HepG2	liver:	n/a
9	chr6:57972680-57972730	H1-hESC	embryonic stem cell:	embryo
10	chr6:57972223-57972273	SK-N-MC	brain:	n/a
11	chr6:57972721-57972771	AoSMC	blood vessel:	n/a
12	chr6:57614321-57614371	AG09319	gingival:	n/a
13	chr6:58001971-58002021	HCF	heart:	n/a
14	chr6:57970666-57970716	HAEpiC	amniotic membrane:	n/a
15	chr6:57972223-57972273	AG04450	lung:	fetal
16	chr6:57970592-57970642	HUVEC	blood vessel:	n/a
17	chr6:57972680-57972730	RPTEC	kidney:	n/a
18	chr6:57972349-57972399	HL-60	blood:	n/a
19	chr6:57972223-57972273	BJ	skin:	n/a
20	chr6:57912662-57912712	AoSMC	blood vessel:	n/a
21	chr6:57614321-57614371	SAEC	small airway:	n/a
22	chr6:57972349-57972399	MCF10A-Er-Src	breast:	n/a
23	chr6:57970592-57970642	A549	lung:	n/a
24	chr6:57972680-57972730	IMR90	lung:	fetal
25	chr6:58001971-58002021	NHDF-neo	bronchial:	n/a
26	chr6:57614321-57614371	MCF10A-Er-Src	breast:	n/a
27	chr6:57614321-57614371	HepG2	liver:	n/a
28	chr6:57614321-57614371	NHBE	bronchial:	n/a
29	chr6:58001971-58002021	AG09309	skin:	n/a
30	chr6:57972223-57972273	GM19239	blood:	n/a
31	chr6:58001971-58002021	HL-60	blood:	n/a
32	chr6:57972223-57972273	HIPEpiC	eye:	n/a
33	chr6:57972223-57972273	U87	brain:	n/a
34	chr6:57614321-57614371	NB4	blood:	n/a
35	chr6:57970666-57970716	HepG2	liver:	n/a
36	chr6:57970592-57970642	GM19239	blood:	n/a
37	chr6:57972721-57972771	NH-A	brain:	n/a
38	chr6:57912662-57912712	ProgFib	skin:	n/a
39	chr6:57972349-57972399	PFSK-1	brain:	n/a
40	chr6:57972349-57972399	Hela-S3	cervix:	n/a
41	chr6:57970592-57970642	U87	brain:	n/a
42	chr6:57972721-57972771	T-47D	breast:	n/a
43	chr6:57614321-57614371	HUVEC	blood vessel:	n/a
44	chr6:58001971-58002021	PANC-1	pancreas:	n/a
45	chr6:58001971-58002021	AG10803	skin:	n/a
46	chr6:57972721-57972771	AG04450	lung:	fetal
47	chr6:57912662-57912712	AG09319	gingival:	n/a
48	chr6:57912662-57912712	SK-N-MC	brain:	n/a
49	chr6:57912662-57912712	GM12892	blood:	n/a
50	chr6:57970666-57970716	SKMC	muscle:	n/a

(count:15 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr5:21570110..21571992-chr6:57575867..57577390,2	K562	blood:
2	chr3:81978758..81979420-chr6:57518103..57518962,2	MCF-7	breast:
3	chr6:57444969..57446432-chr6:57539130..57540030,7	MCF-7	breast:
4	chr11:17753668..17754453-chr6:57615850..57616702,2	MCF-7	breast:
5	chr6:57217129..57218039-chr6:57539079..57539990,3	MCF-7	breast:
6	chr6:57489928..57492575-chr6:57494690..57497411,2	K562	blood:
7	chr6:57489928..57492575-chr6:57494690..57497411,2	K562	blood:
8	chr6:57766644..57767228-chr6:62859661..62860581,2	MCF-7	breast:
9	chr6:57541185..57543919-chr8:104728155..104729992,2	MCF-7	breast:
10	chr18:1906473..1906973-chr6:57539499..57540003,2	MCF-7	breast:
11	chr6:57445356..57445958-chr6:57689666..57690275,2	MCF-7	breast:
12	chr6:57489928..57493477-chr6:57494690..57497411,3	K562	blood:
13	chr6:57445326..57445995-chr6:57539539..57540106,2	MCF-7	breast:
14	chr6:57445250..57446013-chr6:57537509..57538705,3	MCF-7	breast:
15	chr6:57489928..57493477-chr6:57494690..57497411,3	K562	blood:

(count:10 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-BAG2-3	chr6:57691393-57691645	XLOC_005331
2	lnc-BAG2-11	chr6:57798854-57798915	NONHSAT113302
3	lnc-RAB23-12	chr6:57551484-57551584	NONHSAT113297
4	lnc-RAB23-15	chr6:57793932-57794280	NONHSAT113301
5	lnc-BAG2-3	chr6:57690895-57690956	XLOC_005331
6	lnc-RAB23-14	chr6:57686969-57687949	NONHSAT113299
7	lnc-RAB23-12	chr6:57543887-57544127	NONHSAT113297
8	lnc-RAB23-13	chr6:57674277-57674350	NONHSAT113298
9	lnc-RAB23-13	chr6:57671339-57671489	NONHSAT113298
10	lnc-BAG2-11	chr6:57799352-57799604	NONHSAT113302

No data

Variant related genes	Relation type
ENSG00000270213	TF binding region
ENSG00000231273	TF binding region
GAPDHP41	TF binding region
RBBP4P3	TF binding region
ENSG00000262828	TF binding region
ENSG00000270213	CpG island
ENSG00000231273	CpG island
GAPDHP41	CpG island
RBBP4P3	CpG island
ENSG00000262828	CpG island
ENSG00000263745	chromatin interactions
NR3C1	miRNA target sites
PNN	miRNA target sites

Extended variants
information (count: 9767 )
Associated
traits (count: 76 )

Variant overlapped rSNPs/rCNVs (count:9767 , 50 per page) page: 1 2 3 4 5 6 7 ... 196

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs4715827	chr6:57489683-57489684	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs10949156	chr6:57489723-57489724	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs564907643	chr6:57489725-57489726	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs3805805	chr6:57489730-57489731	ZNF genes & repeats Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs10531933	chr6:57489752-57489753	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs66498611	chr6:57489753-57489754	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs397750276	chr6:57489756-57489757	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs10949157	chr6:57489766-57489767	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs10949158	chr6:57489775-57489776	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs4715828	chr6:57489796-57489797	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs12660984	chr6:57489801-57489802	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs386701646	chr6:57489819-57489820	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs3828718	chr6:57489821-57489822	ZNF genes & repeats Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
14	rs547716355	chr6:57489829-57489830	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs10531934	chr6:57489835-57489836	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs67278968	chr6:57489837-57489838	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs565716787	chr6:57489840-57489841	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs4715830	chr6:57489877-57489878	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs529949940	chr6:57489881-57489882	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs4715831	chr6:57489886-57489887	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs75143130	chr6:57489888-57489889	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs200744492	chr6:57489895-57489896	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs4715832	chr6:57489903-57489904	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs570116039	chr6:57489915-57489916	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs77355257	chr6:57489927-57489928	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs537551882	chr6:57489941-57489942	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs13328284	chr6:57489946-57489947	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs552277423	chr6:57489956-57489957	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs7451871	chr6:57489980-57489981	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs9476190	chr6:57489989-57489990	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs4263589	chr6:57490031-57490032	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs570868727	chr6:57490039-57490040	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs3828719	chr6:57490041-57490042	ZNF genes & repeats Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs534983345	chr6:57490057-57490058	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs553661667	chr6:57490077-57490078	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs111633349	chr6:57490098-57490099	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs112239707	chr6:57490111-57490112	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs1924134	chr6:57490136-57490137	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs557138360	chr6:57490162-57490163	ZNF genes & repeats Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs1855427	chr6:57490238-57490239	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs1924135	chr6:57490254-57490255	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs374384139	chr6:57490267-57490268	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs3805806	chr6:57490272-57490273	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs543154182	chr6:57490279-57490280	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs564724317	chr6:57490287-57490288	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs576801520	chr6:57490301-57490302	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs375568507	chr6:57490324-57490325	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs559568141	chr6:57490329-57490330	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs5876644	chr6:57490337-57490338	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs386407242	chr6:57490338-57490339	Weak transcription ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:76)

Disease	PMID	Source
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	21858162	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	22495311	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastric cancer	17908304	CNVD
Neuroblastoma	16790693	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	17603634	CNVD
Systemic lupus erythematosus	17503323	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Breast cancer	16608533	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Glioblastoma multiforme	22286061	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Colorectal cancer	16272173	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
T-cell lymphomas	19863542	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	22522925	CNVD
Cancer	20164919	CNVD
Intellectual disability	21811512	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Glioma	20126413	CNVD
Schizophrenia	20967226	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD

Chromatin state (count:480 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:57486400-57492600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr6:57487400-57491800	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr6:57490000-57490200	ZNF genes & repeats	Pancreatic Islets	Pancreatic Islet
4	chr6:57490200-57490400	Weak transcription	Pancreatic Islets	Pancreatic Islet
5	chr6:57490200-57503000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr6:57490400-57491200	Enhancers	Pancreatic Islets	Pancreatic Islet
7	chr6:57491800-57492800	ZNF genes & repeats	Aorta	Aorta
8	chr6:57492200-57496000	Weak transcription	Primary hematopoietic stem cells	blood
9	chr6:57492600-57492800	ZNF genes & repeats	iPS DF 19.11 Cell Line	embryonic stem cell
10	chr6:57492600-57493000	Enhancers	Breast Myoepithelial Primary Cells	Breast
11	chr6:57492800-57493200	Enhancers	Aorta	Aorta
12	chr6:57492800-57493200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
13	chr6:57492800-57493200	ZNF genes & repeats	NHDF-Ad	bronchial
14	chr6:57493200-57494800	Weak transcription	Aorta	Aorta
15	chr6:57493200-57494800	Weak transcription	NHDF-Ad	bronchial
16	chr6:57494400-57496600	ZNF genes & repeats	Primary T cells from cord blood	blood
17	chr6:57494400-57501000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr6:57494800-57495400	ZNF genes & repeats	NHDF-Ad	bronchial
19	chr6:57494800-57496600	ZNF genes & repeats	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
20	chr6:57494800-57496600	ZNF genes & repeats	Aorta	Aorta
21	chr6:57495600-57496800	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
22	chr6:57495800-57496200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
23	chr6:57495800-57496600	ZNF genes & repeats	NHDF-Ad	bronchial
24	chr6:57496400-57496600	ZNF genes & repeats	Gastric	stomach
25	chr6:57496400-57496600	ZNF genes & repeats	Left Ventricle	heart
26	chr6:57496400-57496600	ZNF genes & repeats	Psoas Muscle	Psoas
27	chr6:57496400-57496600	ZNF genes & repeats	Rectal Smooth Muscle	rectum
28	chr6:57496600-57498000	Weak transcription	Primary hematopoietic stem cells	blood
29	chr6:57496600-57498600	Weak transcription	NHDF-Ad	bronchial
30	chr6:57496600-57499200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
31	chr6:57496600-57499200	Weak transcription	Left Ventricle	heart
32	chr6:57496600-57499400	Weak transcription	Aorta	Aorta
33	chr6:57496600-57500400	Weak transcription	Gastric	stomach
34	chr6:57496600-57503400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
35	chr6:57496600-57514200	Weak transcription	Rectal Smooth Muscle	rectum
36	chr6:57496800-57497800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
37	chr6:57497400-57499400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
38	chr6:57497800-57498200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
39	chr6:57497800-57498600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
40	chr6:57497800-57500800	ZNF genes & repeats	Fetal Brain Male	brain
41	chr6:57498000-57498200	Enhancers	Pancreatic Islets	Pancreatic Islet
42	chr6:57498000-57499000	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
43	chr6:57498000-57499600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
44	chr6:57498000-57500000	Enhancers	Primary hematopoietic stem cells	blood
45	chr6:57498200-57498600	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
46	chr6:57498200-57498600	Flanking Active TSS	Pancreatic Islets	Pancreatic Islet
47	chr6:57498200-57498800	Enhancers	K562	blood
48	chr6:57498200-57499000	Enhancers	Primary hematopoietic stem cells short term culture	blood
49	chr6:57498400-57498600	Enhancers	Dnd41	blood
50	chr6:57498600-57498800	Enhancers	Pancreatic Islets	Pancreatic Islet

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links