Variant report

Variant	nsv1029032
Chromosome Location	chr9:7431547-7764888
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr9:7756002-7756595	GM12878	blood:	n/a	n/a
2	BACH1	chr9:7562620-7562663	K562	blood:	n/a	n/a
3	BACH1	chr9:7536423-7536658	H1-hESC	embryonic stem cell:	n/a	n/a
4	BACH1	chr9:7442522-7442723	K562	blood:	n/a	n/a
5	BATF	chr9:7646803-7646970	GM12878	blood:	n/a	chr9:7646910-7646921
6	BATF	chr9:7756144-7756434	GM12878	blood:	n/a	chr9:7756282-7756293 chr9:7756283-7756293
7	BATF	chr9:7646825-7646968	GM12878	blood:	n/a	chr9:7646910-7646921
8	BATF	chr9:7756144-7756427	GM12878	blood:	n/a	chr9:7756282-7756293 chr9:7756283-7756293
9	BHLHE40	chr9:7656668-7657036	HepG2	liver:	n/a	n/a
10	BHLHE40	chr9:7657970-7658106	K562	blood:	n/a	chr9:7658052-7658073
11	BHLHE40	chr9:7762757-7763103	GM12878	blood:	n/a	n/a
12	BHLHE40	chr9:7756142-7756553	GM12878	blood:	n/a	n/a
13	BRCA1	chr9:7458103-7458303	Hela-S3	cervix:	n/a	n/a
14	CCNT2	chr9:7711055-7711338	K562	blood:	n/a	n/a
15	CEBPB	chr9:7608413-7608697	A549	lung:	n/a	chr9:7608538-7608549
16	CEBPB	chr9:7514522-7514762	A549	lung:	n/a	n/a
17	CEBPB	chr9:7545777-7546126	A549	lung:	n/a	chr9:7545946-7545955 chr9:7545946-7545955 chr9:7545946-7545955
18	CEBPB	chr9:7545779-7546139	HepG2	liver:	n/a	chr9:7545946-7545955 chr9:7545946-7545955 chr9:7545946-7545955
19	CEBPB	chr9:7653874-7654221	HepG2	liver:	n/a	chr9:7654041-7654054 chr9:7654043-7654052 chr9:7654041-7654052 chr9:7654043-7654054
20	CEBPB	chr9:7671863-7672167	IMR90	lung:	n/a	chr9:7671995-7672006
21	CEBPB	chr9:7491725-7491963	Hela-S3	cervix:	n/a	n/a
22	CEBPB	chr9:7707992-7708285	HepG2	liver:	n/a	chr9:7708124-7708135 chr9:7708158-7708169
23	CEBPB	chr9:7665957-7666290	H1-hESC	embryonic stem cell:	n/a	n/a
24	CEBPB	chr9:7578500-7578700	A549	lung:	n/a	chr9:7578623-7578634
25	CEBPB	chr9:7533406-7534152	A549	lung:	n/a	chr9:7533687-7533700 chr9:7533686-7533703
26	CEBPB	chr9:7545763-7546136	IMR90	lung:	n/a	chr9:7545946-7545955 chr9:7545946-7545955 chr9:7545946-7545955
27	CEBPB	chr9:7733793-7734032	HepG2	liver:	n/a	n/a
28	CEBPB	chr9:7491189-7491422	A549	lung:	n/a	chr9:7491265-7491276 chr9:7491317-7491328
29	CEBPB	chr9:7671864-7672143	HepG2	liver:	n/a	chr9:7671995-7672006
30	CEBPB	chr9:7608387-7608696	HepG2	liver:	n/a	chr9:7608538-7608549
31	CEBPB	chr9:7625413-7625638	HepG2	liver:	n/a	chr9:7625469-7625480
32	CEBPB	chr9:7653957-7654181	A549	lung:	n/a	chr9:7654041-7654054 chr9:7654043-7654052 chr9:7654041-7654052 chr9:7654043-7654054
33	CEBPB	chr9:7491152-7491445	HepG2	liver:	n/a	chr9:7491265-7491276 chr9:7491317-7491328
34	CEBPB	chr9:7708027-7708303	A549	lung:	n/a	chr9:7708124-7708135 chr9:7708158-7708169
35	CEBPB	chr9:7548886-7549026	A549	lung:	n/a	n/a
36	CEBPB	chr9:7548909-7549114	IMR90	lung:	n/a	n/a
37	CEBPB	chr9:7671973-7672082	K562	blood:	n/a	chr9:7671995-7672006
38	CEBPB	chr9:7691005-7691230	HepG2	liver:	n/a	chr9:7691079-7691090
39	CEBPB	chr9:7671880-7672164	A549	lung:	n/a	chr9:7671995-7672006
40	CEBPB	chr9:7542696-7542901	H1-hESC	embryonic stem cell:	n/a	n/a
41	CEBPB	chr9:7536464-7536727	H1-hESC	embryonic stem cell:	n/a	chr9:7536654-7536667 chr9:7536656-7536667 chr9:7536656-7536667 chr9:7536654-7536667
42	CEBPB	chr9:7471139-7471391	A549	lung:	n/a	n/a
43	CEBPB	chr9:7545794-7546090	K562	blood:	n/a	chr9:7545946-7545955 chr9:7545946-7545955 chr9:7545946-7545955
44	CEBPB	chr9:7545781-7546113	Hela-S3	cervix:	n/a	chr9:7545946-7545955 chr9:7545946-7545955 chr9:7545946-7545955
45	CEBPB	chr9:7635615-7635813	A549	lung:	n/a	n/a
46	CEBPB	chr9:7578486-7578755	HepG2	liver:	n/a	chr9:7578623-7578634
47	CEBPB	chr9:7731977-7732064	H1-hESC	embryonic stem cell:	n/a	n/a
48	CEBPB	chr9:7545804-7546125	H1-hESC	embryonic stem cell:	n/a	chr9:7545946-7545955 chr9:7545946-7545955 chr9:7545946-7545955
49	CHD1	chr9:7756311-7756401	GM12878	blood:	n/a	n/a
50	CHD2	chr9:7536430-7536658	H1-hESC	embryonic stem cell:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:7478187-7478237	PANC-1	pancreas:	n/a
2	chr9:7478187-7478237	PANC-1	pancreas:	n/a
3	chr9:7478307-7478357	HUVEC	blood vessel:	n/a
4	chr9:7478307-7478357	SK-N-SH_RA	brain:	n/a
5	chr9:7478187-7478237	HCPEpiC	choroid plexus:	n/a
6	chr9:7543165-7543215	GM12891	blood:	n/a
7	chr9:7478307-7478357	A549	lung:	n/a
8	chr9:7478187-7478237	HCF	heart:	n/a
9	chr9:7543165-7543215	HepG2	liver:	n/a
10	chr9:7478307-7478357	HRE	kidney:	n/a
11	chr9:7478187-7478237	Caco-2	colon:	n/a
12	chr9:7543165-7543215	U87	brain:	n/a
13	chr9:7478187-7478237	NH-A	brain:	n/a
14	chr9:7543165-7543215	ovcar-3	ovarian:	n/a
15	chr9:7543165-7543215	SKMC	muscle:	n/a
16	chr9:7478187-7478237	AG04450	lung:	fetal
17	chr9:7478307-7478357	AG04449	skin:	fetal
18	chr9:7478307-7478357	SKMC	muscle:	n/a
19	chr9:7478187-7478237	ovcar-3	ovarian:	n/a
20	chr9:7543165-7543215	NH-A	brain:	n/a
21	chr9:7543165-7543215	H1-hESC	embryonic stem cell:	embryo
22	chr9:7478187-7478237	AG09309	skin:	n/a
23	chr9:7543165-7543215	AG04450	lung:	fetal
24	chr9:7478187-7478237	MCF-7	breast:	n/a
25	chr9:7478187-7478237	NB4	blood:	n/a
26	chr9:7478307-7478357	MCF-7	breast:	n/a
27	chr9:7543165-7543215	RPTEC	kidney:	n/a
28	chr9:7478307-7478357	ECC-1	luminal epithelium:	n/a
29	chr9:7478187-7478237	HRPEpiC	eye:	n/a
30	chr9:7478307-7478357	GM12892	blood:	n/a
31	chr9:7543165-7543215	HUVEC	blood vessel:	n/a
32	chr9:7478187-7478237	HCM	heart:	n/a
33	chr9:7543165-7543215	IMR90	lung:	fetal
34	chr9:7478187-7478237	BJ	skin:	n/a
35	chr9:7478307-7478357	AG04450	lung:	fetal
36	chr9:7478187-7478237	SAEC	small airway:	n/a
37	chr9:7478307-7478357	NHBE	bronchial:	n/a
38	chr9:7478187-7478237	AG09319	gingival:	n/a
39	chr9:7543165-7543215	HCF	heart:	n/a
40	chr9:7478187-7478237	NHBE	bronchial:	n/a
41	chr9:7478307-7478357	ovcar-3	ovarian:	n/a
42	chr9:7543165-7543215	AoSMC	blood vessel:	n/a
43	chr9:7543165-7543215	HRPEpiC	eye:	n/a
44	chr9:7478187-7478237	GM06990	blood:	n/a
45	chr9:7543165-7543215	SK-N-MC	brain:	n/a
46	chr9:7478307-7478357	HCF	heart:	n/a
47	chr9:7478187-7478237	NHDF-neo	bronchial:	n/a
48	chr9:7543165-7543215	CMK	blood:	n/a
49	chr9:7478187-7478237	A549	lung:	n/a
50	chr9:7543165-7543215	BE2_C	brain:	n/a

No.	Distal block	Cell Line	Cell type
1	chr9:7456877..7459465-chr9:7461939..7464244,2	K562	blood:
2	chr9:7569797..7570734-chr9:8895690..8896630,4	MCF-7	breast:
3	chr9:7570819..7572380-chr9:7577523..7579697,2	K562	blood:
4	chr9:7570819..7572380-chr9:7577523..7579697,2	K562	blood:
5	chr9:7456877..7459465-chr9:7461939..7464244,2	K562	blood:
6	chr9:7569899..7570770-chr9:7827280..7828131,4	MCF-7	breast:
7	chr9:7634427..7636382-chr9:7637356..7639690,2	K562	blood:
8	chr9:7764096..7766786-chr9:7797842..7799916,2	MCF-7	breast:
9	chr9:7579179..7582103-chr9:7582391..7584856,2	K562	blood:
10	chr9:7488272..7490593-chr9:7498267..7499824,2	MCF-7	breast:
11	chr9:7705498..7708258-chr9:7798756..7800943,2	MCF-7	breast:
12	chr9:7592774..7593282-chr9:7827299..7827877,2	MCF-7	breast:
13	chr1:121484531..121485420-chr9:7590895..7591415,3	MCF-7	breast:
14	chr9:7526587..7529247-chr9:7794978..7796914,2	MCF-7	breast:
15	chr9:7401751..7402674-chr9:7535710..7536817,3	MCF-7	breast:
16	chr9:7740039..7741870-chr9:7890019..7892015,2	K562	blood:
17	chr9:7579179..7582103-chr9:7582391..7584856,2	K562	blood:
18	chr9:7488272..7490593-chr9:7498267..7499824,2	MCF-7	breast:
19	chr9:7569880..7570683-chr9:8895710..8896327,2	MCF-7	breast:
20	chr9:7401862..7402674-chr9:7479089..7479897,2	MCF-7	breast:
21	chr9:7634427..7636382-chr9:7637356..7639690,2	K562	blood:
22	chr9:7592716..7593255-chr9:7844122..7844707,2	MCF-7	breast:
23	chr9:7052337..7053367-chr9:7536144..7537120,3	MCF-7	breast:

Variant related genes	Relation type
RPL4P5	TF binding region
ENSG00000178654	TF binding region
RPL4P5	CpG island
ENSG00000178654	CpG island
ENSG00000137038	chromatin interactions

Extended variants
information (count: 10049 )
Associated
traits (count: 108 )

Variant overlapped rSNPs/rCNVs (count:10049 , 50 per page) page: 1 2 3 4 5 6 7 ... 201

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs141877337	chr9:7431551-7431552	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs577667058	chr9:7431587-7431588	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs36006090	chr9:7431588-7431589	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs553660797	chr9:7431599-7431600	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs565886099	chr9:7431603-7431604	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs150667741	chr9:7431612-7431613	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs558090855	chr9:7431617-7431618	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs73398068	chr9:7431618-7431619	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs184503318	chr9:7431689-7431690	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs7035002	chr9:7431711-7431712	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs574824892	chr9:7431732-7431733	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs542337230	chr9:7431740-7431741	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs386732235	chr9:7431750-7431751	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs74405375	chr9:7431751-7431752	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs546049366	chr9:7431763-7431764	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs564435767	chr9:7431826-7431827	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs184616648	chr9:7431827-7431828	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs549495944	chr9:7431833-7431834	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs140877622	chr9:7431850-7431851	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs528951741	chr9:7431851-7431852	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs73398072	chr9:7431873-7431874	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs144811521	chr9:7431906-7431907	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs527745165	chr9:7431921-7431922	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs73398074	chr9:7431939-7431940	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
25	rs117566711	chr9:7431952-7431953	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs373140993	chr9:7431979-7431980	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs529086445	chr9:7432028-7432029	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs77481373	chr9:7432066-7432067	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs537381142	chr9:7432075-7432076	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs111870404	chr9:7432171-7432172	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs556262314	chr9:7432176-7432177	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs574798455	chr9:7432188-7432189	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs73398075	chr9:7432194-7432195	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
34	rs554251781	chr9:7432212-7432213	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs572251406	chr9:7432225-7432226	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs376917295	chr9:7432238-7432239	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs375657060	chr9:7432248-7432249	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs545977684	chr9:7432283-7432284	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs386732236	chr9:7432316-7432317	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs78637764	chr9:7432317-7432318	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs112629625	chr9:7432321-7432322	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs561489300	chr9:7432363-7432364	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs528888689	chr9:7432375-7432376	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs147968856	chr9:7432379-7432380	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs370508797	chr9:7432396-7432397	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs528245474	chr9:7432427-7432428	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs559489253	chr9:7432436-7432437	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs112845047	chr9:7432451-7432452	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs369774961	chr9:7432458-7432459	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs75576278	chr9:7432470-7432471	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:108)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Intracranial aneurysm	16715129	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Disorders of sex development	22290220	CNVD
Glioblastoma multiforme	21080181	CNVD
Sudden cardiac death	19188705	CNVD
Non-small cell lung cancer	21829676	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21183584	CNVD
Non-small cell lung cancer	21952639	CNVD
Disorders of sex development	21048976	CNVD
Neuroblastoma	18923191	CNVD
Intellectual disability	22102821	CNVD
abnormal development	18461090	CNVD
Honadal dysgenesis	21048976	CNVD
Medulloblastoma	21979893	CNVD
Lung cancer	16740712	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Melanoma	18172304	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Developmental delay	21147756	CNVD
Lung cancer	18438408	CNVD
XY gonadal dysgenesis	20685758	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Myelodysplastic syndrome	21251322	CNVD
Breast cancer	21785460	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Myelofibrosis	22110671	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Hepatocellular carcinoma	18803288	CNVD
Breast cancer	21364760	CNVD
Metastatic melanoma	18483359	CNVD
Glioblastoma	19074898	CNVD
Malignant melanoma	19074898	CNVD
Prostate cancer	16573809	CNVD
Metanephric adenoma	20802469	CNVD
Medulloblastoma	16783165	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Cancer	20164920	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Renal cell carcinoma	21215367	CNVD
Breast cancer	22522925	CNVD
Autism	20858261	CNVD
Epilepsy	20858261	CNVD
Mental retardation	20858261	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Pancreatic cancer	21811587	CNVD
Chordoma	21215367	CNVD

Chromatin state (count:661 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:7431200-7432400	ZNF genes & repeats	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr9:7432400-7433000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr9:7432600-7435000	Enhancers	HMEC	breast
4	chr9:7432800-7434800	Enhancers	NHEK	skin
5	chr9:7433000-7434600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
6	chr9:7433000-7434600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
7	chr9:7433000-7434800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr9:7433200-7434200	Enhancers	Esophagus	oesophagus
9	chr9:7433200-7434200	ZNF genes & repeats	Lung	lung
10	chr9:7433600-7434000	Enhancers	Gastric	stomach
11	chr9:7434000-7434400	Weak transcription	Gastric	stomach
12	chr9:7434600-7439400	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
13	chr9:7434600-7439800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
14	chr9:7434800-7439400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr9:7434800-7439400	Weak transcription	NHEK	skin
16	chr9:7435000-7438000	Weak transcription	HMEC	breast
17	chr9:7438000-7440400	Enhancers	HMEC	breast
18	chr9:7438200-7438400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
19	chr9:7438400-7439400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
20	chr9:7438800-7440200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
21	chr9:7438800-7440400	Enhancers	Fetal Muscle Leg	muscle
22	chr9:7439000-7440400	Enhancers	Muscle Satellite Cultured Cells	--
23	chr9:7439000-7440400	Enhancers	HSMMtube	muscle
24	chr9:7439400-7440200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
25	chr9:7439400-7440200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
26	chr9:7439400-7440400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
27	chr9:7439400-7440400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
28	chr9:7439400-7440400	Enhancers	NHEK	skin
29	chr9:7439600-7440000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
30	chr9:7439600-7440200	Enhancers	Brain Germinal Matrix	brain
31	chr9:7439600-7440200	Enhancers	Brain Hippocampus Middle	brain
32	chr9:7439600-7440400	Enhancers	Brain Cingulate Gyrus	brain
33	chr9:7439600-7440400	Enhancers	Brain Substantia Nigra	brain
34	chr9:7439800-7440200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
35	chr9:7439800-7440200	Enhancers	Skeletal Muscle Female	skeletal muscle
36	chr9:7439800-7440400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
37	chr9:7440400-7442400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
38	chr9:7440400-7442400	Weak transcription	NHEK	skin
39	chr9:7440400-7442600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
40	chr9:7440400-7443000	Weak transcription	HMEC	breast
41	chr9:7440400-7452400	Weak transcription	HSMMtube	muscle
42	chr9:7440600-7446800	Weak transcription	Psoas Muscle	Psoas
43	chr9:7442200-7442400	ZNF genes & repeats	H1 Derived Mesenchymal Stem Cells	ES cell derived
44	chr9:7442200-7442800	Enhancers	Esophagus	oesophagus
45	chr9:7442400-7442600	Active TSS	HSMM	muscle
46	chr9:7442400-7442600	Active TSS	NHEK	skin
47	chr9:7442400-7442800	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
48	chr9:7442400-7449800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
49	chr9:7442600-7442800	Flanking Active TSS	HSMM	muscle
50	chr9:7442600-7442800	Flanking Active TSS	NHEK	skin

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links