Variant report

Variant	nsv1029036
Chromosome Location	chr8:115605603-115632043
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:115611607..115613247-chr8:115625084..115626919,2	K562	blood:
2	chr8:115611607..115613247-chr8:115625084..115626919,2	K562	blood:
3	chr8:115598053..115599853-chr8:115604312..115606791,3	MCF-7	breast:

Extended variants
information (count: 72 )
Associated
traits (count: 95 )

Variant overlapped rSNPs/rCNVs (count:72 , 50 per page) page: 1 2

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs187290093	chr8:115605615-115605616	Enhancers	n/a	n/a	Overlapped CNVs	n/a
2	rs191216046	chr8:115605623-115605624	Enhancers	n/a	n/a	Overlapped CNVs	n/a
3	rs552951269	chr8:115605638-115605639	Enhancers	n/a	n/a	Overlapped CNVs	n/a
4	rs146123317	chr8:115605664-115605665	Enhancers	n/a	n/a	Overlapped CNVs	n/a
5	rs542326773	chr8:115605682-115605683	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs563706386	chr8:115605686-115605687	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs536649386	chr8:115605774-115605775	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs148785853	chr8:115605811-115605812	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs181575044	chr8:115605820-115605821	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs564811638	chr8:115605823-115605824	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs532143176	chr8:115605836-115605837	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs547372170	chr8:115605852-115605853	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs561987127	chr8:115605863-115605864	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs377613160	chr8:115605953-115605954	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs559315385	chr8:115606003-115606004	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs556492639	chr8:115606025-115606026	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs142477268	chr8:115606027-115606028	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs548294136	chr8:115606029-115606030	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs185941607	chr8:115606064-115606065	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs190717180	chr8:115606082-115606083	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs539157584	chr8:115606091-115606092	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs150717447	chr8:115606109-115606110	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs72688158	chr8:115606114-115606115	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs552916826	chr8:115606116-115606117	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs574800316	chr8:115606172-115606173	Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs72688160	chr8:115606270-115606271	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs557466483	chr8:115606332-115606333	Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs569420258	chr8:115606355-115606356	Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs577825399	chr8:115618040-115618041	Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs183751940	chr8:115618080-115618081	Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs144477307	chr8:115618103-115618104	Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs573169804	chr8:115618111-115618112	Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs572437655	chr8:115618175-115618176	Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs542703091	chr8:115618196-115618197	Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs187609015	chr8:115618199-115618200	Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs576134928	chr8:115618202-115618203	Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs112457230	chr8:115618261-115618262	Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs541834757	chr8:115618271-115618272	Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs543571049	chr8:115618293-115618294	Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs6993330	chr8:115618369-115618370	Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs74354813	chr8:115618374-115618375	Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs191487452	chr8:115618377-115618378	Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs73358878	chr8:115618389-115618390	Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs547280308	chr8:115619653-115619654	Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs537242185	chr8:115619662-115619663	Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs111355662	chr8:115619709-115619710	Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs565928176	chr8:115619738-115619739	Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs367959404	chr8:115619743-115619744	Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs568790013	chr8:115619801-115619802	Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs200541617	chr8:115619839-115619840	Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:95)

Disease	PMID	Source
Melanoma	18172304	CNVD
Medulloblastoma	21979893	CNVD
Ewing''s sarcoma	21437220	CNVD
Autism	19415332	CNVD
Malaria	21533027	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Esophageal cancer	21851588	CNVD
Gastric cancer	17908304	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Breast cancer	21245420	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Liver carcinoma	19366792	CNVD
Seminomas	18059402	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Pancreatic cancer	21811587	CNVD
Thyroid cancer	19087340	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	17603634	CNVD
Testicular cancer	18059402	CNVD
Breast cancer	17133270	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	21248843	CNVD
abnormal development	18461090	CNVD
Oral cancer	21386901	CNVD
Uveal melanoma	21693616	CNVD
Langer-Giedion syndrome	22283845	CNVD
Cancer	21637783	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	20632083	CNVD
Breast cancer	19602461	CNVD
Cancer	22429812	CNVD
Endometrial cancer	22040021	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oral cancer	19627613	CNVD
Prostate cancer	21088497	CNVD
colon cancer	17210682	CNVD
Breast cancer	21264507	CNVD
Breast cancer	22028636	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	16751803	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Gastric cancer	17167181	CNVD
Colorectal cancer	19359472	CNVD
Breast cancer	16461572	CNVD
Human rectal carcinomas	16397240	CNVD
Medulloblastoma	16968546	CNVD
head and neck squamous cell carcinoma	18028549	CNVD
Breast cancer	17001317	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Ewing''s sarcoma	17952124	CNVD
Urothelial carcinoma	21177765	CNVD
Lung cancer	18438408	CNVD
Breast cancer	16608533	CNVD
Metanephric adenoma	20802469	CNVD
Hepatocellular carcinoma	18803288	CNVD
Prostate cancer	18632612	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	16573809	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Carcinoma ex pleomorphic adenoma	18828159	CNVD
Adenocarcinoma	21044232	CNVD
Squamous cell cancer	20885788	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Prostate cancer	16461572	CNVD
Breast cancer	21399628	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Breast cancer	17393978	CNVD
Burkitt''s lymphoma	18698080	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Breast cancer	17899364	CNVD
Acute myeloid leukemia	21251322	CNVD
lymphocytic leukemia	21291569	CNVD
Colorectal cancer	16774939	CNVD
Autosomal-dominant progressive external ophthalmoplegia	19664747	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Sezary syndrome	18413736	CNVD
Breast cancer	21611746	CNVD
Developmental delay	21147756	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Congenital diaphragmatic hernia	21525063	CNVD
Non-small cell lung cancer	19010865	CNVD
small cell lung cancer	20016488	CNVD
Chronic myeloid leukemia	21384125	CNVD
Breast cancer	21364760	CNVD
Neuroticism	17667963	CNVD
Papillary thyroid cancer	17515504	CNVD
Basal cell lymphoma	17053054	CNVD

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:115604200-115606400	Enhancers	Dnd41	blood
2	chr8:115618000-115618400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr8:115619600-115620400	Enhancers	Dnd41	blood
4	chr8:115619800-115620000	Enhancers	iPS-15b Cell Line	embryonic stem cell
5	chr8:115619800-115620200	Enhancers	Colon Smooth Muscle	Colon
6	chr8:115621600-115622000	Enhancers	iPS-15b Cell Line	embryonic stem cell

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