Variant report

Variant nsv1029412
Chromosome Location chr5:12588949-12778382
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:363 , 50 per page) page: 1 2 3 4 5 6 7 8
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:12582000-12596000 Weak transcription K562 blood
2 chr5:12596000-12596400 Strong transcription K562 blood
3 chr5:12596400-12597400 Weak transcription K562 blood
4 chr5:12597400-12598400 Strong transcription K562 blood
5 chr5:12598400-12610600 Weak transcription K562 blood
6 chr5:12599000-12599200 Enhancers ES-I3 Cell Line embryonic stem cell
7 chr5:12602000-12612400 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr5:12602400-12602800 Enhancers Fetal Brain Male brain
9 chr5:12610600-12610800 Enhancers K562 blood
10 chr5:12610800-12612000 Active TSS K562 blood
11 chr5:12612000-12612200 Flanking Active TSS K562 blood
12 chr5:12612200-12614200 Enhancers K562 blood
13 chr5:12612400-12612600 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
14 chr5:12613400-12613600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
15 chr5:12613600-12617600 Enhancers Dnd41 blood
16 chr5:12614200-12615000 Flanking Active TSS K562 blood
17 chr5:12614600-12615200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr5:12614800-12616000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr5:12615000-12615200 Active TSS K562 blood
20 chr5:12615200-12615400 Flanking Active TSS K562 blood
21 chr5:12615200-12615600 Enhancers HUES64 Cell Line embryonic stem cell
22 chr5:12615400-12615600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr5:12615400-12615600 Active TSS K562 blood
24 chr5:12615600-12616200 Flanking Active TSS K562 blood
25 chr5:12615600-12627200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr5:12616200-12616600 Enhancers K562 blood
27 chr5:12616200-12622800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr5:12616600-12616800 Flanking Active TSS K562 blood
29 chr5:12616800-12617400 Enhancers K562 blood
30 chr5:12617400-12618200 Weak transcription K562 blood
31 chr5:12618200-12618600 ZNF genes & repeats K562 blood
32 chr5:12618400-12621800 Weak transcription iPS-20b Cell Line embryonic stem cell
33 chr5:12618600-12618800 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
34 chr5:12618800-12621000 Weak transcription HUES48 Cell Line embryonic stem cell
35 chr5:12621000-12624000 Enhancers HUES48 Cell Line embryonic stem cell
36 chr5:12621400-12623800 Enhancers iPS-15b Cell Line embryonic stem cell
37 chr5:12621600-12624600 Enhancers HUES64 Cell Line embryonic stem cell
38 chr5:12621600-12625400 Weak transcription Pancreatic Islets Pancreatic Islet
39 chr5:12621800-12623600 Enhancers iPS-20b Cell Line embryonic stem cell
40 chr5:12622400-12624600 Enhancers ES-I3 Cell Line embryonic stem cell
41 chr5:12622600-12623200 Enhancers HUES6 Cell Line embryonic stem cell
42 chr5:12622600-12623600 Enhancers H1 Cell Line embryonic stem cell
43 chr5:12622600-12624000 Enhancers iPS-18 Cell Line embryonic stem cell
44 chr5:12622600-12624200 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
45 chr5:12622600-12625000 Enhancers H9 Cell Line embryonic stem cell
46 chr5:12622800-12623200 Enhancers ES-WA7 Cell Line embryonic stem cell
47 chr5:12622800-12623200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
48 chr5:12622800-12625200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
49 chr5:12622800-12625200 Enhancers Cortex derived primary cultured neurospheres brain
50 chr5:12623000-12624000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain

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