Variant report

Variant nsv1030036
Chromosome Location chr5:179543546-179610871
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:697 , 50 per page) page: 1 2 3 4 5 6 7 ... 14
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:179536000-179543600 Weak transcription Fetal Brain Female brain
2 chr5:179536200-179554200 Weak transcription Brain Germinal Matrix brain
3 chr5:179537800-179546000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr5:179539000-179545000 Weak transcription iPS-15b Cell Line embryonic stem cell
5 chr5:179542600-179544000 Enhancers Primary hematopoietic stem cells short term culture blood
6 chr5:179542800-179543800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
7 chr5:179542800-179543800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
8 chr5:179543000-179543800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr5:179543000-179543800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
10 chr5:179543000-179544000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
11 chr5:179543000-179544000 Enhancers Brain Hippocampus Middle brain
12 chr5:179543000-179544000 Enhancers Brain Inferior Temporal Lobe brain
13 chr5:179543000-179544400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
14 chr5:179543200-179543800 Enhancers ES-WA7 Cell Line embryonic stem cell
15 chr5:179543200-179543800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr5:179543200-179543800 Enhancers Brain Anterior Caudate brain
17 chr5:179543200-179544000 Enhancers Brain Angular Gyrus brain
18 chr5:179543200-179544400 Enhancers Brain Substantia Nigra brain
19 chr5:179543200-179545200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr5:179543400-179543800 Enhancers iPS DF 6.9 Cell Line embryonic stem cell
21 chr5:179543400-179544000 Enhancers Brain Cingulate Gyrus brain
22 chr5:179543400-179553800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
23 chr5:179543600-179548000 Strong transcription Fetal Brain Female brain
24 chr5:179543800-179544600 Enhancers Esophagus oesophagus
25 chr5:179543800-179545400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr5:179543800-179548800 Weak transcription Brain Anterior Caudate brain
27 chr5:179544000-179544600 Enhancers Breast Myoepithelial Primary Cells Breast
28 chr5:179544000-179548600 Weak transcription Brain Hippocampus Middle brain
29 chr5:179544000-179548800 Weak transcription Brain Angular Gyrus brain
30 chr5:179544000-179553800 Weak transcription Brain Cingulate Gyrus brain
31 chr5:179544000-179554000 Weak transcription Brain Inferior Temporal Lobe brain
32 chr5:179544200-179544400 Bivalent Enhancer Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
33 chr5:179544400-179545400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
34 chr5:179544400-179548800 Weak transcription Brain Substantia Nigra brain
35 chr5:179545200-179545400 Enhancers K562 blood
36 chr5:179545200-179545600 Enhancers ES-UCSF4 Cell Line embryonic stem cell
37 chr5:179545400-179545600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
38 chr5:179545400-179546400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
39 chr5:179545600-179553600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr5:179546400-179547400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
41 chr5:179547200-179548200 Enhancers Pancreas Pancrea
42 chr5:179547400-179548000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
43 chr5:179547600-179548000 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
44 chr5:179548000-179553800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
45 chr5:179548000-179558800 Weak transcription Fetal Brain Female brain
46 chr5:179548600-179549000 Enhancers Brain Hippocampus Middle brain
47 chr5:179548800-179549200 Enhancers Brain Anterior Caudate brain
48 chr5:179548800-179549400 Enhancers Brain Angular Gyrus brain
49 chr5:179548800-179549400 Enhancers Brain Substantia Nigra brain
50 chr5:179549400-179549600 Enhancers Placenta Placenta

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