Variant report

Variant	nsv1030425
Chromosome Location	chr7:107910716-108041036
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1443)
CpG islands
(count:489)
Chromatin interactive
region (count:186)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1443 , 50 per page) page: 1 2 3 4 5 6 7 ... 29

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:107998929-107999584	HepG2	liver:	n/a	n/a
2	ARID3A	chr7:107940020-107940021	K562	blood:	n/a	n/a
3	ARID3A	chr7:107939809-107940021	HepG2	liver:	n/a	n/a
4	ARID3A	chr7:107981410-107981723	HepG2	liver:	n/a	n/a
5	ARID3A	chr7:108025604-108025847	HepG2	liver:	n/a	n/a
6	ARID3A	chr7:107992019-107992880	HepG2	liver:	n/a	n/a
7	ATF1	chr7:107915060-107915262	K562	blood:	n/a	n/a
8	ATF1	chr7:108025180-108025769	K562	blood:	n/a	n/a
9	ATF1	chr7:107935160-107935370	K562	blood:	n/a	n/a
10	ATF2	chr7:107949317-107949794	GM12878	blood:	n/a	n/a
11	ATF2	chr7:107910793-107911221	GM12878	blood:	n/a	n/a
12	ATF2	chr7:107951706-107952409	GM12878	blood:	n/a	n/a
13	ATF2	chr7:107987995-107988431	H1-hESC	embryonic stem cell:	n/a	n/a
14	ATF2	chr7:107910685-107911211	GM12878	blood:	n/a	n/a
15	ATF2	chr7:107951874-107952281	GM12878	blood:	n/a	n/a
16	BATF	chr7:107910914-107911171	GM12878	blood:	n/a	n/a
17	BATF	chr7:108026544-108026830	GM12878	blood:	n/a	n/a
18	BATF	chr7:107951846-107952249	GM12878	blood:	n/a	n/a
19	BATF	chr7:107949418-107949714	GM12878	blood:	n/a	n/a
20	BATF	chr7:107925241-107925469	GM12878	blood:	n/a	chr7:107925366-107925377
21	BATF	chr7:107910852-107911196	GM12878	blood:	n/a	chr7:107910878-107910886
22	BATF	chr7:108016230-108016558	GM12878	blood:	n/a	n/a
23	BATF	chr7:107951879-107952247	GM12878	blood:	n/a	n/a
24	BATF	chr7:107949364-107949714	GM12878	blood:	n/a	n/a
25	BATF	chr7:107925297-107925507	GM12878	blood:	n/a	chr7:107925366-107925377
26	BATF	chr7:107948779-107949056	GM12878	blood:	n/a	n/a
27	BATF	chr7:108016229-108016512	GM12878	blood:	n/a	n/a
28	BCL11A	chr7:107951818-107952231	GM12878	blood:	n/a	chr7:107952166-107952175
29	BCL11A	chr7:107949424-107949695	GM12878	blood:	n/a	n/a
30	BCL11A	chr7:107925213-107925523	GM12878	blood:	n/a	n/a
31	BCL3	chr7:107991984-107992629	A549	lung:	n/a	n/a
32	BCL3	chr7:107951878-107952243	GM12878	blood:	n/a	chr7:107952166-107952175
33	BCLAF1	chr7:107951860-107952220	GM12878	blood:	n/a	chr7:107952166-107952175
34	BHLHE40	chr7:108000769-108001074	GM12878	blood:	n/a	n/a
35	BHLHE40	chr7:107992127-107992476	HepG2	liver:	n/a	n/a
36	BHLHE40	chr7:107924855-107925430	GM12878	blood:	n/a	n/a
37	BHLHE40	chr7:107951845-107952243	GM12878	blood:	n/a	n/a
38	BHLHE40	chr7:108016388-108016412	GM12878	blood:	n/a	n/a
39	BHLHE40	chr7:107998937-107999400	HepG2	liver:	n/a	n/a
40	BHLHE40	chr7:107975631-107975676	A549	lung:	n/a	n/a
41	BHLHE40	chr7:107968568-107968703	GM12878	blood:	n/a	n/a
42	BHLHE40	chr7:107949515-107949694	GM12878	blood:	n/a	n/a
43	BRCA1	chr7:107939645-107940114	Hela-S3	cervix:	n/a	chr7:107940003-107940010
44	BRCA1	chr7:107999002-107999202	HepG2	liver:	n/a	n/a
45	CCNT2	chr7:107939807-107939837	K562	blood:	n/a	n/a
46	CCNT2	chr7:107915131-107915247	K562	blood:	n/a	n/a
47	CEBPB	chr7:107986378-107986794	MCF-7	breast:	n/a	n/a
48	CEBPB	chr7:107986579-107986782	A549	lung:	n/a	n/a
49	CEBPB	chr7:107991947-107992877	A549	lung:	n/a	chr7:107992248-107992259
50	CEBPB	chr7:107998975-107999567	A549	lung:	n/a	n/a

(count:489 , 50 per page) page: 1 2 3 4 5 6 7 ... 10

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:107967614-107967664	Hepatocyte	liver:	n/a
2	chr7:107967614-107967664	Hepatocyte	liver:	n/a
3	chr7:107931294-107931344	HRPEpiC	eye:	n/a
4	chr7:107987769-107987819	CMK	blood:	n/a
5	chr7:107931294-107931344	ProgFib	skin:	n/a
6	chr7:108025567-108025617	LNCaP	prostate:	n/a
7	chr7:107965081-107965131	BE2_C	brain:	n/a
8	chr7:108025567-108025617	SK-N-SH	brain:	n/a
9	chr7:107969837-107969887	U87	brain:	n/a
10	chr7:107969837-107969887	HepG2	liver:	n/a
11	chr7:107950866-107950916	GM19239	blood:	n/a
12	chr7:107987769-107987819	HPAEpiC	pulmonary alveolar:	n/a
13	chr7:108025567-108025617	NHBE	bronchial:	n/a
14	chr7:107965081-107965131	HCF	heart:	n/a
15	chr7:107987769-107987819	GM06990	blood:	n/a
16	chr7:107969837-107969887	MCF10A-Er-Src	breast:	n/a
17	chr7:107987769-107987819	Hela-S3	cervix:	n/a
18	chr7:108025567-108025617	HNPCEpiC	eye:	n/a
19	chr7:107948864-107948914	HCM	heart:	n/a
20	chr7:108025567-108025617	A549	lung:	n/a
21	chr7:107948864-107948914	K562	blood:	n/a
22	chr7:107967614-107967664	NHDF-neo	bronchial:	n/a
23	chr7:107967614-107967664	ECC-1	luminal epithelium:	n/a
24	chr7:107950866-107950916	Caco-2	colon:	n/a
25	chr7:107987769-107987819	ovcar-3	ovarian:	n/a
26	chr7:107965081-107965131	HCM	heart:	n/a
27	chr7:107967614-107967664	NT2-D1	testis:	n/a
28	chr7:107965081-107965131	AG09319	gingival:	n/a
29	chr7:107950866-107950916	HNPCEpiC	eye:	n/a
30	chr7:107931294-107931344	T-47D	breast:	n/a
31	chr7:107967614-107967664	H1-hESC	embryonic stem cell:	embryo
32	chr7:107950866-107950916	HEEpiC	esophagus:	n/a
33	chr7:107948864-107948914	HRE	kidney:	n/a
34	chr7:107931294-107931344	AG09309	skin:	n/a
35	chr7:107987769-107987819	Hepatocyte	liver:	n/a
36	chr7:108025567-108025617	ovcar-3	ovarian:	n/a
37	chr7:107965081-107965131	HPAEpiC	pulmonary alveolar:	n/a
38	chr7:107967614-107967664	ovcar-3	ovarian:	n/a
39	chr7:107969837-107969887	HNPCEpiC	eye:	n/a
40	chr7:107969837-107969887	H1-hESC	embryonic stem cell:	embryo
41	chr7:108025567-108025617	HMEC	breast:	n/a
42	chr7:108025567-108025617	SK-N-SH_RA	brain:	n/a
43	chr7:107965081-107965131	T-47D	breast:	n/a
44	chr7:108025567-108025617	GM19239	blood:	n/a
45	chr7:108025567-108025617	HRPEpiC	eye:	n/a
46	chr7:107948864-107948914	AoSMC	blood vessel:	n/a
47	chr7:107967614-107967664	K562	blood:	n/a
48	chr7:107967614-107967664	HNPCEpiC	eye:	n/a
49	chr7:107969837-107969887	PrEC	prostate:	n/a
50	chr7:107969837-107969887	HEEpiC	esophagus:	n/a

(count:186 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr7:107997021..107999223-chr7:108017768..108019495,2	MCF-7	breast:
2	chr7:107821055..107823408-chr7:107926864..107929002,2	MCF-7	breast:
3	chr7:107923634..107926362-chr7:107928616..107931028,3	MCF-7	breast:
4	chr7:107818696..107821681-chr7:107992805..107995213,2	MCF-7	breast:
5	chr7:107938640..107940703-chr7:107991452..107994655,4	MCF-7	breast:
6	chr7:108019353..108022320-chr7:108026421..108029053,2	MCF-7	breast:
7	chr7:107930752..107933426-chr7:107936477..107939262,3	MCF-7	breast:
8	chr7:107999225..108000845-chr7:108077774..108079837,2	MCF-7	breast:
9	chr7:107991896..107993618-chr7:108006610..108008809,2	MCF-7	breast:
10	chr7:107942852..107945824-chr7:108094045..108096766,3	MCF-7	breast:
11	chr7:107911761..107914725-chr7:107919453..107921215,2	K562	blood:
12	chr7:107832494..107835185-chr7:107947670..107949448,2	MCF-7	breast:
13	chr2:58925351..58927966-chr7:107933916..107936194,2	MCF-7	breast:
14	chr7:107926710..107929161-chr7:107930856..107933186,2	K562	blood:
15	chr7:107944423..107947151-chr7:107952282..107954463,2	K562	blood:
16	chr14:62282253..62283220-chr7:108012418..108013183,2	MCF-7	breast:
17	chr7:108037200..108040749-chr7:108041126..108043530,3	MCF-7	breast:
18	chr7:107940207..107942755-chr7:107985046..107987339,2	MCF-7	breast:
19	chr7:107934022..107936872-chr7:108006050..108008513,2	MCF-7	breast:
20	chr7:107938387..107941926-chr7:108096111..108098470,4	MCF-7	breast:
21	chr7:107919806..107922501-chr7:107923966..107926073,3	K562	blood:
22	chr7:107930752..107933426-chr7:107936477..107939262,3	MCF-7	breast:
23	chr7:107936793..107941797-chr7:107984945..107993863,13	MCF-7	breast:
24	chr7:107964856..107967775-chr7:107967931..107970381,3	MCF-7	breast:
25	chr7:107942231..107944155-chr7:107945358..107947357,2	MCF-7	breast:
26	chr7:107998177..108000618-chr7:108002459..108004002,2	K562	blood:
27	chr7:107984388..107993798-chr7:108093279..108099270,17	MCF-7	breast:
28	chr7:107967866..107970588-chr7:107974217..107976402,2	MCF-7	breast:
29	chr7:107994751..107997423-chr7:108093264..108097218,4	MCF-7	breast:
30	chr7:108040975..108043949-chr7:108092664..108095074,2	MCF-7	breast:
31	chr7:107925805..107928742-chr7:107940005..107942470,2	K562	blood:
32	chr7:108008768..108011253-chr7:108015718..108019224,4	MCF-7	breast:
33	chr7:107938640..107940703-chr7:107991452..107994655,4	MCF-7	breast:
34	chr7:107935963..107938050-chr7:107942181..107944015,2	K562	blood:
35	chr7:107973727..107975875-chr7:107982634..107985172,2	K562	blood:
36	chr7:107988750..107990727-chr7:108091201..108092929,2	MCF-7	breast:
37	chr7:107926469..107929433-chr7:108094747..108097499,3	MCF-7	breast:
38	chr7:107840521..107844716-chr7:107989632..107993969,4	MCF-7	breast:
39	chr7:107959850..107961749-chr7:107966123..107968145,2	K562	blood:
40	chr7:107893481..107895284-chr7:107986919..107989502,2	MCF-7	breast:
41	chr7:107988643..107991410-chr7:108016162..108018347,3	MCF-7	breast:
42	chr7:107978588..107983755-chr7:107986747..107990779,6	MCF-7	breast:
43	chr7:107962380..107965223-chr7:107965724..107968731,3	K562	blood:
44	chr7:107840154..107842979-chr7:107937702..107939902,2	MCF-7	breast:
45	chr7:107936599..107939475-chr7:108034217..108037147,2	MCF-7	breast:
46	chr7:107978588..107983755-chr7:107986747..107990779,6	MCF-7	breast:
47	chr7:107975728..107977944-chr7:107990404..107993160,3	MCF-7	breast:
48	chr7:107991286..107993466-chr7:108009431..108011060,2	MCF-7	breast:
49	chr7:107980565..107981546-chr7:107992150..107992675,2	MCF-7	breast:
50	chr7:107997597..108000598-chr7:108005435..108008873,4	MCF-7	breast:

No data

Variant related genes	Relation type
NRCAM	TF binding region
ENSG00000266112	TF binding region
NRCAM	CpG island
ENSG00000266112	CpG island
ENSG00000266112	chromatin interactions
ENSG00000177683	chromatin interactions
ENSG00000128590	chromatin interactions
ENSG00000135241	chromatin interactions
ENSG00000091129	chromatin interactions

Extended variants
information (count: 4815 )
Associated
traits (count: 87 )

Variant overlapped rSNPs/rCNVs (count:4815 , 50 per page) page: 1 2 3 4 5 6 7 ... 97

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs569681693	chr7:107910731-107910732	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
2	rs140908137	chr7:107910738-107910739	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
3	rs77909355	chr7:107910758-107910759	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
4	rs565886032	chr7:107910791-107910792	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
5	rs141452488	chr7:107910793-107910794	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
6	rs534866580	chr7:107910800-107910801	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
7	rs554910201	chr7:107910832-107910833	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
8	rs369798516	chr7:107910836-107910837	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
9	rs188889490	chr7:107910845-107910846	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
10	rs536690478	chr7:107910874-107910875	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
11	rs556598854	chr7:107910911-107910912	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
12	rs576425396	chr7:107910969-107910970	Enhancers Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
13	rs545505902	chr7:107911031-107911032	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs565290305	chr7:107911044-107911045	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs558218953	chr7:107911107-107911108	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs149743204	chr7:107911116-107911117	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs145478561	chr7:107911130-107911131	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs578009955	chr7:107911174-107911175	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs141100714	chr7:107911179-107911180	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs529623354	chr7:107911189-107911190	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs572601584	chr7:107911193-107911194	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs543050550	chr7:107911195-107911196	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs372260892	chr7:107911233-107911234	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs533612350	chr7:107911250-107911251	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs541267711	chr7:107911328-107911329	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs532077853	chr7:107911380-107911381	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs552250123	chr7:107911382-107911383	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs116786802	chr7:107911397-107911398	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs146963857	chr7:107911398-107911399	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs2300003	chr7:107911401-107911402	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs2300004	chr7:107911494-107911495	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
32	rs2300005	chr7:107911565-107911566	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
33	rs556256346	chr7:107911566-107911567	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs62469193	chr7:107911605-107911606	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
35	rs538718334	chr7:107911636-107911637	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs530818177	chr7:107911641-107911642	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs559051090	chr7:107911652-107911653	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs1269662	chr7:107911705-107911706	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs137978982	chr7:107911753-107911754	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs554829990	chr7:107911771-107911772	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs574760463	chr7:107911772-107911773	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs115766397	chr7:107911857-107911858	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs563088790	chr7:107911860-107911861	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs34990303	chr7:107911869-107911870	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs2300006	chr7:107911898-107911899	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
46	rs545569510	chr7:107911902-107911903	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs181316202	chr7:107911916-107911917	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs528272339	chr7:107911921-107911922	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs548438579	chr7:107911945-107911946	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs568284111	chr7:107911948-107911949	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:87)

Disease	PMID	Source
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	16864856	CNVD
Squamous cell cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	17387387	CNVD
Low-grade fibromyxoid sarcoma	0	CNVD
Oligodendroglial tumors	17285580	CNVD
Endometrial cancer	22040021	CNVD
Burkitt''s lymphoma	18698080	CNVD
Breast cancer	21264507	CNVD
Shwachman-Diamond syndrome	22934832	CNVD
Colorectal cancer	19359472	CNVD
Cutaneous malignant melanoma	17690212	CNVD
Leukemia	17361228	CNVD
Breast cancer	16461572	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Malignant melanoma	17690212	CNVD
Renal cell carcinoma	18592004	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Multiple myeloma	17550852	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Neurodevelopmental disorder	22521361	CNVD
abortions and stillbirths	19751515	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Acute myeloid leukemia	20729466	CNVD
Lung cancer	18438408	CNVD
Metanephric adenoma	20802469	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Burkitt''s lymphoma	19759907	CNVD
Myelodysplastic syndrome	21251322	CNVD
Acute myeloid leukemia	21251322	CNVD
Breast cancer	21785460	CNVD
Chronic myeloid leukemia	21384125	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Breast cancer	21364760	CNVD
lymphocytic leukemia	21291569	CNVD
Basal cell lymphoma	17053054	CNVD
Prostate cancer	16573809	CNVD
Medulloblastoma	16783165	CNVD
Melanoma	17363583	CNVD
Myelofibrosis	22110671	CNVD
Squamous cell cancer	20885788	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Breast cancer	16397240	CNVD
Biliary cancer	19435499	CNVD
Non-small cell lung cancer	21829676	CNVD
Ovarian neoplasms	16753589	CNVD
Prostate cancer	23792589	CNVD
Adenocarcinoma	21044232	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Autism	19401682	CNVD
Non-small cell lung cancer	19889201	CNVD
Acute myeloid leukemia	18000384	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Metastatic melanoma	18483359	CNVD
Autism	18414403	CNVD
Autism	19546859	CNVD
Schizophrenia	19546859	CNVD
Tourette syndrome	19546859	CNVD
Melanoma	19188590	CNVD
small cell lung cancer	20016488	CNVD
Myxofibrosarcoma	20639860	CNVD
Breast cancer	22522925	CNVD
Cancer	20164919	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD

Chromatin state (count:1290 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:107887400-107925000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr7:107904000-107910800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr7:107906000-107911000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
4	chr7:107907000-107911400	Enhancers	A549	lung
5	chr7:107907200-107923400	Weak transcription	Fetal Brain Male	brain
6	chr7:107907400-107911400	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr7:107907400-107919400	Weak transcription	HUVEC	blood vessel
8	chr7:107907400-107923400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr7:107907800-107925000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr7:107908800-107911000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr7:107909000-107911400	Enhancers	Cortex derived primary cultured neurospheres	brain
12	chr7:107909600-107918000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr7:107910400-107911400	Enhancers	Pancreatic Islets	Pancreatic Islet
14	chr7:107910400-107912000	Enhancers	NH-A	brain
15	chr7:107910600-107910800	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr7:107910600-107911000	Enhancers	Primary hematopoietic stem cells short term culture	blood
17	chr7:107910600-107911000	Flanking Active TSS	GM12878-XiMat	blood
18	chr7:107910600-107911200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr7:107910600-107911400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
20	chr7:107910800-107911000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
21	chr7:107910800-107911200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
22	chr7:107910800-107911400	Enhancers	Osteobl	bone
23	chr7:107911000-107911400	Enhancers	GM12878-XiMat	blood
24	chr7:107911000-107912200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
25	chr7:107911400-107918400	Weak transcription	A549	lung
26	chr7:107911400-107922000	Weak transcription	Cortex derived primary cultured neurospheres	brain
27	chr7:107912200-107912600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
28	chr7:107912600-107923000	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
29	chr7:107917200-107922600	Weak transcription	Right Atrium	heart
30	chr7:107918000-107919000	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
31	chr7:107918400-107919400	Strong transcription	A549	lung
32	chr7:107918400-107935000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
33	chr7:107918600-107918800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
34	chr7:107918800-107919000	Enhancers	Pancreas	Pancrea
35	chr7:107918800-107919200	ZNF genes & repeats	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
36	chr7:107919000-107920200	Weak transcription	Pancreas	Pancrea
37	chr7:107919000-107920600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
38	chr7:107919200-107919600	Bivalent Enhancer	K562	blood
39	chr7:107919200-107924800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
40	chr7:107919400-107920400	Weak transcription	A549	lung
41	chr7:107919400-107924200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
42	chr7:107919400-107926400	Enhancers	HUVEC	blood vessel
43	chr7:107919600-107919800	Enhancers	K562	blood
44	chr7:107919800-107920000	Flanking Active TSS	K562	blood
45	chr7:107920000-107920600	Enhancers	K562	blood
46	chr7:107920200-107920600	Enhancers	Pancreas	Pancrea
47	chr7:107920200-107921000	Enhancers	Fetal Lung	lung
48	chr7:107920200-107921000	Enhancers	Spleen	Spleen
49	chr7:107920200-107921200	Enhancers	Brain Cingulate Gyrus	brain
50	chr7:107920400-107923200	Enhancers	A549	lung

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links