Variant report

Variant	nsv1030655
Chromosome Location	chr6:4257190-4473701
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3052)
CpG islands
(count:1161)
Chromatin interactive
region (count:105)
LncRNA
region (count:141)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3052 , 50 per page) page: 1 2 3 4 5 6 7 ... 62

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:4358943-4359212	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:4337061-4337069	K562	blood:	n/a	n/a
3	ARID3A	chr6:4337347-4337688	HepG2	liver:	n/a	n/a
4	ARID3A	chr6:4323122-4323474	K562	blood:	n/a	n/a
5	ARID3A	chr6:4337342-4337673	K562	blood:	n/a	n/a
6	ARID3A	chr6:4459428-4459682	HepG2	liver:	n/a	n/a
7	ARID3A	chr6:4321095-4321503	K562	blood:	n/a	n/a
8	ARID3A	chr6:4358995-4359244	K562	blood:	n/a	n/a
9	ARID3A	chr6:4292256-4292710	K562	blood:	n/a	n/a
10	ARID3A	chr6:4274672-4275153	K562	blood:	n/a	n/a
11	ARID3A	chr6:4320597-4320601	K562	blood:	n/a	n/a
12	ARID3A	chr6:4371555-4372189	K562	blood:	n/a	n/a
13	ARID3A	chr6:4459423-4459617	K562	blood:	n/a	n/a
14	ARID3A	chr6:4420426-4420740	K562	blood:	n/a	n/a
15	ARID3A	chr6:4257300-4257543	K562	blood:	n/a	n/a
16	ATF1	chr6:4380295-4380488	K562	blood:	n/a	n/a
17	ATF1	chr6:4319535-4319777	K562	blood:	n/a	n/a
18	ATF1	chr6:4290117-4290317	K562	blood:	n/a	n/a
19	ATF1	chr6:4291643-4292620	K562	blood:	n/a	n/a
20	ATF1	chr6:4321230-4321419	K562	blood:	n/a	n/a
21	ATF1	chr6:4320429-4320758	K562	blood:	n/a	n/a
22	ATF1	chr6:4387606-4387797	K562	blood:	n/a	n/a
23	ATF1	chr6:4257223-4257588	K562	blood:	n/a	n/a
24	ATF1	chr6:4431662-4431756	K562	blood:	n/a	n/a
25	ATF1	chr6:4371386-4372137	K562	blood:	n/a	n/a
26	ATF1	chr6:4382623-4382877	K562	blood:	n/a	n/a
27	ATF1	chr6:4420436-4420836	K562	blood:	n/a	n/a
28	ATF1	chr6:4317217-4317524	K562	blood:	n/a	n/a
29	ATF1	chr6:4388922-4389146	K562	blood:	n/a	n/a
30	ATF1	chr6:4459328-4459665	K562	blood:	n/a	n/a
31	ATF1	chr6:4358933-4359347	K562	blood:	n/a	n/a
32	ATF1	chr6:4336956-4337645	K562	blood:	n/a	n/a
33	ATF1	chr6:4435051-4435518	K562	blood:	n/a	n/a
34	ATF1	chr6:4436128-4436625	K562	blood:	n/a	n/a
35	ATF1	chr6:4274670-4274921	K562	blood:	n/a	n/a
36	ATF1	chr6:4323008-4323882	K562	blood:	n/a	n/a
37	ATF1	chr6:4441484-4441571	K562	blood:	n/a	n/a
38	ATF2	chr6:4407962-4408329	GM12878	blood:	n/a	n/a
39	ATF2	chr6:4323010-4323419	H1-hESC	embryonic stem cell:	n/a	n/a
40	ATF2	chr6:4282024-4282454	H1-hESC	embryonic stem cell:	n/a	chr6:4282273-4282280
41	ATF2	chr6:4282082-4282426	H1-hESC	embryonic stem cell:	n/a	chr6:4282273-4282280
42	ATF2	chr6:4282009-4282537	GM12878	blood:	n/a	chr6:4282273-4282280
43	ATF2	chr6:4282094-4282439	GM12878	blood:	n/a	chr6:4282273-4282280
44	ATF3	chr6:4358697-4359404	A549	lung:	n/a	chr6:4359087-4359101
45	ATF3	chr6:4337465-4337647	K562	blood:	n/a	n/a
46	ATF3	chr6:4358772-4359356	A549	lung:	n/a	chr6:4359087-4359101
47	ATF3	chr6:4323038-4323437	K562	blood:	n/a	n/a
48	ATF3	chr6:4274647-4274886	K562	blood:	n/a	n/a
49	ATF3	chr6:4352090-4352762	A549	lung:	n/a	n/a
50	ATF3	chr6:4291993-4292362	K562	blood:	n/a	n/a

(count:1161 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:4461158-4461208	ProgFib	skin:	n/a
2	chr6:4282172-4282222	HCPEpiC	choroid plexus:	n/a
3	chr6:4461158-4461208	ProgFib	skin:	n/a
4	chr6:4282172-4282222	HCPEpiC	choroid plexus:	n/a
5	chr6:4459669-4459719	ovcar-3	ovarian:	n/a
6	chr6:4428712-4428762	SK-N-SH_RA	brain:	n/a
7	chr6:4370460-4370510	NT2-D1	testis:	n/a
8	chr6:4370460-4370510	GM19239	blood:	n/a
9	chr6:4459669-4459719	HCT-116	colon:	n/a
10	chr6:4428712-4428762	ovcar-3	ovarian:	n/a
11	chr6:4279354-4279404	HEK293	kidney:	embryo
12	chr6:4459669-4459719	A549	lung:	n/a
13	chr6:4322739-4322789	NB4	blood:	n/a
14	chr6:4282075-4282125	PFSK-1	brain:	n/a
15	chr6:4428712-4428762	HIPEpiC	eye:	n/a
16	chr6:4350359-4350409	BE2_C	brain:	n/a
17	chr6:4427110-4427160	HCT-116	colon:	n/a
18	chr6:4282172-4282222	AG04450	lung:	fetal
19	chr6:4381808-4381858	NHDF-neo	bronchial:	n/a
20	chr6:4459669-4459719	ECC-1	luminal epithelium:	n/a
21	chr6:4461158-4461208	AG04450	lung:	fetal
22	chr6:4352453-4352503	HRCEpiC	kidney:	n/a
23	chr6:4282302-4282352	HL-60	blood:	n/a
24	chr6:4286300-4286350	HIPEpiC	eye:	n/a
25	chr6:4352453-4352503	MCF-7	breast:	n/a
26	chr6:4282346-4282396	HAEpiC	amniotic membrane:	n/a
27	chr6:4428712-4428762	AG04450	lung:	fetal
28	chr6:4370460-4370510	HAEpiC	amniotic membrane:	n/a
29	chr6:4282172-4282222	Hela-S3	cervix:	n/a
30	chr6:4381808-4381858	BE2_C	brain:	n/a
31	chr6:4279354-4279404	GM12878	blood:	n/a
32	chr6:4282172-4282222	HNPCEpiC	eye:	n/a
33	chr6:4282302-4282352	HRE	kidney:	n/a
34	chr6:4427110-4427160	HRCEpiC	kidney:	n/a
35	chr6:4282346-4282396	HUVEC	blood vessel:	n/a
36	chr6:4370460-4370510	Hepatocyte	liver:	n/a
37	chr6:4461158-4461208	GM06990	blood:	n/a
38	chr6:4350359-4350409	A549	lung:	n/a
39	chr6:4427110-4427160	HRE	kidney:	n/a
40	chr6:4403020-4403070	MCF10A-Er-Src	breast:	n/a
41	chr6:4427110-4427160	AG09309	skin:	n/a
42	chr6:4322739-4322789	PrEC	prostate:	n/a
43	chr6:4286300-4286350	SK-N-SH_RA	brain:	n/a
44	chr6:4350359-4350409	MCF10A-Er-Src	breast:	n/a
45	chr6:4459669-4459719	HCPEpiC	choroid plexus:	n/a
46	chr6:4322739-4322789	AoSMC	blood vessel:	n/a
47	chr6:4427110-4427160	BJ	skin:	n/a
48	chr6:4282346-4282396	ECC-1	luminal epithelium:	n/a
49	chr6:4461158-4461208	K562	blood:	n/a
50	chr6:4461158-4461208	HRE	kidney:	n/a

(count:105 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr6:4334813..4337787-chr6:4569506..4572040,2	K562	blood:
2	chr6:4398942..4400523-chr6:4402964..4405624,2	K562	blood:
3	chr6:4401864..4404753-chr6:4405538..4407059,2	MCF-7	breast:
4	chr6:4319275..4321491-chr6:4359897..4362207,2	MCF-7	breast:
5	chr6:4371859..4373766-chr6:4377826..4380202,2	MCF-7	breast:
6	chr6:4337985..4341383-chr6:4341452..4343674,3	K562	blood:
7	chr6:4333993..4336795-chr6:4339378..4342008,2	MCF-7	breast:
8	chr6:4321843..4323529-chr6:4350636..4352389,2	MCF-7	breast:
9	chr6:4353848..4355960-chr6:4776598..4779085,2	K562	blood:
10	chr6:4276950..4279499-chr6:4281233..4283367,2	K562	blood:
11	chr6:4443894..4445765-chr6:4448052..4449778,2	MCF-7	breast:
12	chr6:4279688..4281240-chr6:4289291..4291917,2	MCF-7	breast:
13	chr6:4349515..4351510-chr6:4353133..4355673,2	MCF-7	breast:
14	chr6:4296585..4298997-chr6:4299487..4302359,3	K562	blood:
15	chr6:4317271..4319429-chr6:4582694..4584414,2	MCF-7	breast:
16	chr6:4359417..4361025-chr6:4363589..4366332,2	MCF-7	breast:
17	chr6:4324445..4326506-chr6:4412431..4414561,2	MCF-7	breast:
18	chr6:4465798..4468788-chr6:4591118..4593386,2	MCF-7	breast:
19	chr6:4340460..4343142-chr6:4357521..4360296,2	MCF-7	breast:
20	chr6:4357867..4361282-chr6:4367398..4370344,4	MCF-7	breast:
21	chr6:4445245..4447675-chr6:4451631..4454250,2	K562	blood:
22	chr6:4342872..4345232-chr6:4351018..4352663,2	MCF-7	breast:
23	chr6:4279688..4281240-chr6:4289291..4291917,2	MCF-7	breast:
24	chr6:4295726..4298997-chr6:4300052..4302359,3	K562	blood:
25	chr6:4282461..4283976-chr6:4284398..4287284,2	K562	blood:
26	chr6:4365852..4368376-chr6:4465065..4467160,2	MCF-7	breast:
27	chr6:4351209..4353665-chr6:4356006..4358889,4	MCF-7	breast:
28	chr6:4429968..4432992-chr6:4433898..4437374,3	MCF-7	breast:
29	chr6:4312912..4315341-chr6:4776495..4778763,3	MCF-7	breast:
30	chr6:4432640..4435847-chr6:4435972..4439530,3	MCF-7	breast:
31	chr6:4340786..4343119-chr6:4351135..4354014,2	K562	blood:
32	chr6:4371859..4373766-chr6:4377826..4380202,2	MCF-7	breast:
33	chr6:4319275..4321491-chr6:4359897..4362207,2	MCF-7	breast:
34	chr6:4256410..4259237-chr6:4260619..4262312,2	K562	blood:
35	chr6:4291505..4293502-chr6:4295739..4298079,3	K562	blood:
36	chr6:4318883..4321710-chr6:4327346..4329675,2	K562	blood:
37	chr6:4283994..4286651-chr6:4287525..4290024,2	MCF-7	breast:
38	chr6:4276950..4279499-chr6:4281233..4283367,2	K562	blood:
39	chr6:4359577..4361173-chr6:4490171..4493110,2	MCF-7	breast:
40	chr6:4333898..4336735-chr6:4344417..4347343,2	MCF-7	breast:
41	chr6:4263703..4266698-chr6:4268288..4270234,2	K562	blood:
42	chr6:4365316..4368041-chr6:5177218..5180072,2	K562	blood:
43	chr6:4342872..4345232-chr6:4351018..4352663,2	MCF-7	breast:
44	chr6:4264576..4266698-chr6:4268288..4270681,2	K562	blood:
45	chr6:4289821..4291328-chr6:4291674..4294419,2	K562	blood:
46	chr6:4337985..4341383-chr6:4341452..4343674,3	K562	blood:
47	chr6:4256634..4260314-chr6:4272852..4276265,4	MCF-7	breast:
48	chr6:4256634..4260314-chr6:4272852..4276265,4	MCF-7	breast:
49	chr6:4443894..4445765-chr6:4448052..4449778,2	MCF-7	breast:
50	chr6:4358738..4361729-chr6:4368799..4370354,2	K562	blood:

(count:141 , 50 per page) page: 1 2 3

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C6orf201-15	chr6:4280894-4281108	NONHSAT107380
2	lnc-C6orf201-19	chr6:4317226-4317489	NONHSAT107387
3	lnc-C6orf201-14	chr6:4269059-4269247	NONHSAT107373
4	lnc-C6orf201-13	chr6:4257723-4258805	NONHSAT107364
5	lnc-ECI2-8	chr6:4292242-4292270	NONHSAT107383
6	lnc-ECI2-2	chr6:4341985-4345100	XLOC_005589
7	lnc-C6orf201-21	chr6:4401030-4401168	NONHSAT107419
8	lnc-C6orf201-19	chr6:4319145-4319995	NONHSAT107390
9	lnc-C6orf201-20	chr6:4371497-4371760	NONHSAT107406
10	lnc-C6orf201-22	chr6:4369433-4369742	NONHSAT107410
11	lnc-C6orf201-22	chr6:4426677-4426939	NONHSAT107410
12	lnc-CDYL-21	chr6:4417111-4417210	NONHSAT107425
13	lnc-C6orf201-22	chr6:4370140-4370561	NONHSAT107410
14	lnc-ECI2-2	chr6:4345977-4346040	ENSG00000231811.2
15	lnc-ECI2-2	chr6:4341985-4345100	XLOC_005589
16	lnc-ECI2-2	chr6:4346867-4347379	NONHSAT107399
17	lnc-C6orf201-21	chr6:4401562-4401936	NONHSAT107419
18	lnc-C6orf201-22	chr6:4424582-4424720	NONHSAT107410
19	lnc-ECI2-2	chr6:4341985-4345083	XLOC_005589
20	lnc-ECI2-2	chr6:4345957-4346040	XLOC_005589
21	lnc-CDYL-20	chr6:4450612-4450707	NONHSAT107428
22	lnc-ECI2-2	chr6:4341985-4345095	XLOC_005589
23	lnc-ECI2-2	chr6:4346867-4347103	XLOC_005589
24	lnc-ECI2-2	chr6:4341703-4345083	XLOC_005589
25	lnc-ECI2-2	chr6:4346867-4347103	XLOC_005589
26	lnc-CDYL-20	chr6:4454691-4454883	NONHSAT107428
27	lnc-ECI2-8	chr6:4291866-4292375	l_3095_chr6:4286983-4292375_heart
28	lnc-C6orf201-20	chr6:4390074-4390322	NONHSAT107417
29	lnc-ECI2-2	chr6:4342616-4345083	NONHSAT107400
30	lnc-C6orf201-15	chr6:4279663-4279754	NONHSAT107380
31	lnc-ECI2-2	chr6:4347244-4347271	ENSG00000231811.2
32	lnc-ECI2-8	chr6:4286984-4290099	l_3095_chr6:4286983-4292375_heart
33	lnc-C6orf201-22	chr6:4428383-4428687	NONHSAT107410
34	lnc-C6orf201-14	chr6:4269059-4269247	NONHSAT107371
35	lnc-CDYL-19	chr6:4472090-4472135	NONHSAT107434
36	lnc-C6orf201-19	chr6:4328581-4328691	NONHSAT107387
37	lnc-C6orf201-21	chr6:4405340-4405462	NONHSAT107419
38	lnc-C6orf201-20	chr6:4383171-4383281	NONHSAT107406
39	lnc-C6orf201-20	chr6:4388348-4388486	NONHSAT107417
40	lnc-C6orf201-15	chr6:4275023-4278589	NONHSAT107379
41	lnc-CDYL-3	chr6:4467041-4467252	XLOC_005140
42	lnc-C6orf201-22	chr6:4420566-4421476	NONHSAT107410
43	lnc-ECI2-8	chr6:4290956-4291039	l_3095_chr6:4286983-4292375_heart
44	lnc-C6orf201-20	chr6:4387336-4387427	NONHSAT107417
45	lnc-C6orf201-22	chr6:4428897-4429019	NONHSAT107410
46	lnc-ECI2-2	chr6:4345957-4346036	XLOC_005589
47	lnc-ECI2-8	chr6:4290976-4291039	NONHSAT107383
48	lnc-C6orf201-22	chr6:4423011-4423314	NONHSAT107410
49	lnc-C6orf201-20	chr6:4382355-4382635	NONHSAT107406
50	lnc-C6orf201-14	chr6:4270391-4271473	NONHSAT107371

No data

Variant related genes	Relation type
ENSG00000231811	TF binding region
RNA5SP202	TF binding region
ENSG00000231811	CpG island
RNA5SP202	CpG island
ENSG00000247400	chromatin interactions
ENSG00000260239	chromatin interactions
ENSG00000236336	chromatin interactions
ENSG00000231811	chromatin interactions
ENSG00000153046	chromatin interactions
ENSG00000201185	chromatin interactions
ENSG00000102580	chromatin interactions
CTBP1	miRNA target sites
WASF3	miRNA target sites
YBX1	miRNA target sites
WASF2	miRNA target sites
E2F6	miRNA target sites

Extended variants
information (count: 8754 )
Associated
traits (count: 99 )

Variant overlapped rSNPs/rCNVs (count:8754 , 50 per page) page: 1 2 3 4 5 6 7 ... 176

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs192017256	chr6:4257192-4257193	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs560819096	chr6:4257252-4257253	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs576728146	chr6:4257257-4257258	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs572139639	chr6:4257259-4257260	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs376049692	chr6:4257309-4257310	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs11970430	chr6:4257353-4257354	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs183246777	chr6:4257373-4257374	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs186804490	chr6:4257409-4257410	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs189830364	chr6:4257413-4257414	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs562858527	chr6:4257457-4257458	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs531856499	chr6:4257464-4257465	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs11961149	chr6:4257509-4257510	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs144737131	chr6:4257532-4257533	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs527829049	chr6:4257564-4257565	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs547574527	chr6:4257572-4257573	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs148524331	chr6:4257593-4257594	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs539657825	chr6:4257647-4257648	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
18	rs182814203	chr6:4257668-4257669	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
19	rs573630907	chr6:4257722-4257723	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
20	rs376943103	chr6:4257741-4257742	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
21	rs542742048	chr6:4257749-4257750	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
22	rs187095881	chr6:4257764-4257765	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
23	rs193180868	chr6:4257792-4257793	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
24	rs144433092	chr6:4257797-4257798	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
25	rs571942319	chr6:4257798-4257799	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
26	rs534562475	chr6:4257870-4257871	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
27	rs185244930	chr6:4257900-4257901	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
28	rs115982815	chr6:4257959-4257960	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
29	rs34614726	chr6:4258007-4258008	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
30	rs577633419	chr6:4258025-4258026	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
31	rs11349923	chr6:4258033-4258034	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
32	rs528333015	chr6:4258035-4258036	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
33	rs561428720	chr6:4258036-4258037	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
34	rs367878941	chr6:4258057-4258058	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
35	rs551652866	chr6:4258106-4258107	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
36	rs562721290	chr6:4258137-4258138	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
37	rs369477034	chr6:4258208-4258209	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
38	rs78664988	chr6:4258235-4258236	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
39	rs188515622	chr6:4258262-4258263	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
40	rs147398933	chr6:4258263-4258264	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
41	rs139803432	chr6:4258277-4258278	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
42	rs77816804	chr6:4258280-4258281	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
43	rs145291559	chr6:4258357-4258358	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
44	rs9328231	chr6:4258358-4258359	Enhancers Weak transcription	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
45	rs150943398	chr6:4258365-4258366	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
46	rs535794839	chr6:4258388-4258389	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
47	rs370142933	chr6:4258436-4258437	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
48	rs570062380	chr6:4258437-4258438	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
49	rs565924321	chr6:4258492-4258493	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
50	rs534339682	chr6:4258502-4258503	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a

Variant related diseases (count:99)

Disease	PMID	Source
Developmental delay	19490664	CNVD
Cancer	21183584	CNVD
Multiple Epiphyseal Dysplasia	20877625	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Glaucoma	18694899	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Prostate cancer	16573809	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	17603634	CNVD
Cancer	20164920	CNVD
Colorectal cancer	21297112	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Myelodysplastic syndrome	21251322	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Breast cancer	21858162	CNVD
Lung cancer	18438408	CNVD
Bladder cancer	21909424	CNVD
Multiple myeloma	17550852	CNVD
Ewing''s sarcoma	17952124	CNVD
Breast cancer	21364760	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Gastric cancer	16891809	CNVD
Ovarian cancer	21781307	CNVD
Autism	22495311	CNVD
Autism	21448237	CNVD
Cancer	20164919	CNVD
Melanoma	18172304	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Breast cancer	22844521	CNVD
HIV/AIDS	22844521	CNVD
Ovarian cancer	22844521	CNVD
Prostate cancer	22844521	CNVD
Psoriasis	22844521	CNVD
Rheumatoid arthritis	22844521	CNVD
Sclerosis systemic	22844521	CNVD
Systemic lupus erythematosus	22844521	CNVD
Breast cancer	22522925	CNVD
Breast cancer	21552322	CNVD
Immune disease	21076436	CNVD
Autoimmune disease	19135723	CNVD
Systemic lupus erythematosus	17953491	CNVD
Recurrent Infections	22737222	CNVD
Systemic lupus erythematosus	21904924	CNVD
Ependymoma	19289631	CNVD
small cell lung cancer	20016488	CNVD
Gestational infection	22844521	CNVD
Head circumference	22844521	CNVD
Infertility	22844521	CNVD
Recurrent birth weight diabetes	22844521	CNVD
Obesity	22844521	CNVD
Recurrent pregnancy loss	22844521	CNVD
Intellectual disability	21811512	CNVD
Congenital anomalies of the kidney and urinary tract	18694510	CNVD
Nasopharyngeal cancer	22815911	CNVD
dysmorphism	22105932	CNVD
psychomotor delay	22105932	CNVD
Ovarian cancer	19193619	CNVD
Osteosarcoma	16790693	CNVD
Hepatocellular carcinoma	16750200	CNVD
Schizophrenia	20967226	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Basal cell lymphoma	21115979	CNVD
Acute lymphoblastic leukemia	21339820	CNVD

Chromatin state (count:2537 , 50 per page) page: 1 2 3 4 5 6 7 ... 51

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:4254200-4259000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr6:4254400-4258000	Weak transcription	Lung	lung
3	chr6:4254600-4258200	Weak transcription	Left Ventricle	heart
4	chr6:4254600-4259600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
5	chr6:4254800-4258200	Weak transcription	Right Atrium	heart
6	chr6:4254800-4258800	Weak transcription	NHEK	skin
7	chr6:4254800-4259000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr6:4255400-4258400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
9	chr6:4256800-4258000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
10	chr6:4256800-4258200	Enhancers	K562	blood
11	chr6:4256800-4258600	Enhancers	Placenta	Placenta
12	chr6:4256800-4258800	Enhancers	HUVEC	blood vessel
13	chr6:4257400-4259200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr6:4258000-4258400	Enhancers	Lung	lung
15	chr6:4258200-4258600	Enhancers	Right Atrium	heart
16	chr6:4258200-4258800	Enhancers	Left Ventricle	heart
17	chr6:4258200-4260400	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
18	chr6:4258400-4259000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
19	chr6:4258400-4265800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
20	chr6:4258800-4260400	Enhancers	NHEK	skin
21	chr6:4258800-4260600	Weak transcription	HUVEC	blood vessel
22	chr6:4259000-4260200	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr6:4259000-4260400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
24	chr6:4259200-4260200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
25	chr6:4259600-4259800	Enhancers	Duodenum Mucosa	Duodenum
26	chr6:4259600-4260000	Enhancers	Breast Myoepithelial Primary Cells	Breast
27	chr6:4259600-4260200	Enhancers	HMEC	breast
28	chr6:4259800-4262600	Weak transcription	Duodenum Mucosa	Duodenum
29	chr6:4260200-4262200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
30	chr6:4260400-4262000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
31	chr6:4260400-4263000	Weak transcription	NHEK	skin
32	chr6:4260600-4261200	Enhancers	HUVEC	blood vessel
33	chr6:4262400-4262600	Enhancers	Fetal Muscle Trunk	muscle
34	chr6:4262400-4264000	Enhancers	Fetal Muscle Leg	muscle
35	chr6:4262600-4263800	Enhancers	Duodenum Mucosa	Duodenum
36	chr6:4262600-4271400	Weak transcription	Fetal Muscle Trunk	muscle
37	chr6:4264000-4264400	Weak transcription	Fetal Muscle Leg	muscle
38	chr6:4264400-4264600	Enhancers	NHEK	skin
39	chr6:4264400-4265000	Enhancers	Fetal Muscle Leg	muscle
40	chr6:4265000-4268200	Weak transcription	Fetal Muscle Leg	muscle
41	chr6:4265800-4266000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
42	chr6:4266200-4266800	Enhancers	Cortex derived primary cultured neurospheres	brain
43	chr6:4266200-4267200	Enhancers	iPS-15b Cell Line	embryonic stem cell
44	chr6:4266400-4266600	Bivalent Enhancer	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
45	chr6:4266400-4267000	Enhancers	iPS-18 Cell Line	embryonic stem cell
46	chr6:4268200-4270600	Enhancers	Fetal Muscle Leg	muscle
47	chr6:4269200-4269400	Enhancers	Hela-S3	cervix
48	chr6:4269600-4275400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
49	chr6:4269800-4271400	Weak transcription	Hela-S3	cervix
50	chr6:4269800-4271600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin

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