Variant report

Variant	nsv1030933
Chromosome Location	chr7:38286515-38325924
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:159)
CpG islands
(count:673)
Chromatin interactive
region (count:10)
LncRNA
region (count:17)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:159 , 50 per page) page: 1 2 3 4

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:38298340-38298378	K562	blood:	n/a	n/a
2	ATF1	chr7:38319668-38320070	K562	blood:	n/a	n/a
3	ATF1	chr7:38296748-38296967	K562	blood:	n/a	n/a
4	ATF1	chr7:38298851-38299117	K562	blood:	n/a	n/a
5	ATF2	chr7:38289493-38289850	GM12878	blood:	n/a	n/a
6	BATF	chr7:38305616-38305913	GM12878	blood:	n/a	n/a
7	BATF	chr7:38305659-38305874	GM12878	blood:	n/a	n/a
8	BATF	chr7:38289507-38289847	GM12878	blood:	n/a	n/a
9	BATF	chr7:38289510-38289833	GM12878	blood:	n/a	n/a
10	BCL11A	chr7:38289452-38289744	GM12878	blood:	n/a	chr7:38289640-38289649
11	BCL11A	chr7:38289442-38289823	GM12878	blood:	n/a	chr7:38289640-38289649
12	BCL11A	chr7:38305548-38305926	GM12878	blood:	n/a	n/a
13	BCL11A	chr7:38305612-38305832	GM12878	blood:	n/a	n/a
14	BHLHE40	chr7:38313008-38313126	K562	blood:	n/a	n/a
15	CEBPB	chr7:38296681-38297002	K562	blood:	n/a	chr7:38296860-38296873
16	CEBPB	chr7:38321761-38322047	K562	blood:	n/a	chr7:38321909-38321920
17	CEBPB	chr7:38321770-38322083	HepG2	liver:	n/a	chr7:38321909-38321920
18	CEBPB	chr7:38312888-38313596	MCF-7	breast:	n/a	n/a
19	CTCF	chr7:38298899-38298986	ProgFib	skin:	n/a	n/a
20	CTCF	chr7:38299457-38299550	Lung_OC	lung:	n/a	n/a
21	CTCF	chr7:38288542-38288588	Spleen_OC	spleen:	n/a	n/a
22	CTCF	chr7:38315040-38315190	SK-N-SH_RA	brain:	n/a	n/a
23	CTCF	chr7:38292997-38293033	Lung_OC	lung:	n/a	n/a
24	CTCF	chr7:38310342-38310394	Fibrobl	skin:	n/a	n/a
25	CTCF	chr7:38306007-38306040	MCF-7	breast:	n/a	n/a
26	CTCF	chr7:38300410-38300476	Fibrobl	skin:	n/a	n/a
27	CUX1	chr7:38321669-38321797	GM12878	blood:	n/a	n/a
28	E2F4	chr7:38295337-38295499	MCF10A-Er-Src	breast:	n/a	n/a
29	EBF1	chr7:38323422-38323765	GM12878	blood:	n/a	chr7:38323585-38323596
30	EBF1	chr7:38323492-38323690	GM12878	blood:	n/a	chr7:38323585-38323596
31	EP300	chr7:38312905-38313623	MCF-7	breast:	n/a	n/a
32	EP300	chr7:38296707-38296986	K562	blood:	n/a	n/a
33	FOS	chr7:38314199-38314466	MCF10A-Er-Src	breast:	n/a	chr7:38314343-38314353 chr7:38314343-38314352 chr7:38314344-38314351 chr7:38314342-38314353 chr7:38314345-38314356 chr7:38314344-38314352 chr7:38314342-38314354
34	FOS	chr7:38314194-38314488	MCF10A-Er-Src	breast:	n/a	chr7:38314343-38314353 chr7:38314343-38314352 chr7:38314344-38314351 chr7:38314342-38314353 chr7:38314345-38314356 chr7:38314344-38314352 chr7:38314342-38314354
35	FOS	chr7:38314224-38314496	HUVEC	blood vessel:	n/a	chr7:38314343-38314353 chr7:38314343-38314352 chr7:38314344-38314351 chr7:38314342-38314353 chr7:38314345-38314356 chr7:38314344-38314352 chr7:38314342-38314354
36	FOS	chr7:38314246-38314450	MCF10A-Er-Src	breast:	n/a	chr7:38314343-38314353 chr7:38314343-38314352 chr7:38314344-38314351 chr7:38314342-38314353 chr7:38314345-38314356 chr7:38314344-38314352 chr7:38314342-38314354
37	FOS	chr7:38314224-38314388	MCF10A-Er-Src	breast:	n/a	chr7:38314343-38314353 chr7:38314343-38314352 chr7:38314344-38314351 chr7:38314342-38314353 chr7:38314345-38314356 chr7:38314344-38314352 chr7:38314342-38314354
38	FOXA1	chr7:38304288-38304517	T-47D	breast:	n/a	n/a
39	FOXA1	chr7:38313179-38313525	T-47D	breast:	n/a	n/a
40	FOXA1	chr7:38304239-38304536	T-47D	breast:	n/a	n/a
41	FOXA1	chr7:38313205-38313498	T-47D	breast:	n/a	n/a
42	FOXM1	chr7:38313033-38313534	MCF-7	breast:	n/a	n/a
43	FOXM1	chr7:38313122-38313587	MCF-7	breast:	n/a	n/a
44	GATA1	chr7:38314597-38315418	PBDE	blood:	n/a	n/a
45	GATA2	chr7:38319304-38319525	SH-SY5Y	brain:	n/a	chr7:38319359-38319366
46	GATA3	chr7:38311216-38311397	SH-SY5Y	brain:	n/a	n/a
47	GATA3	chr7:38312792-38313729	MCF-7	breast:	n/a	n/a
48	GATA3	chr7:38304227-38304563	MCF-7	breast:	n/a	n/a
49	GATA3	chr7:38322366-38322644	SH-SY5Y	brain:	n/a	n/a
50	GATA3	chr7:38319309-38319928	MCF-7	breast:	n/a	chr7:38319359-38319366

(count:673 , 50 per page) page: 1 2 3 4 5 6 7 ... 14

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:38312366-38312416	ProgFib	skin:	n/a
2	chr7:38316654-38316704	HL-60	blood:	n/a
3	chr7:38312366-38312416	ProgFib	skin:	n/a
4	chr7:38316654-38316704	HL-60	blood:	n/a
5	chr7:38309984-38310034	Hepatocyte	liver:	n/a
6	chr7:38298966-38299016	ProgFib	skin:	n/a
7	chr7:38299481-38299531	HRE	kidney:	n/a
8	chr7:38294113-38294163	HepG2	liver:	n/a
9	chr7:38315971-38316021	BE2_C	brain:	n/a
10	chr7:38315971-38316021	Caco-2	colon:	n/a
11	chr7:38299481-38299531	HMEC	breast:	n/a
12	chr7:38315971-38316021	SKMC	muscle:	n/a
13	chr7:38298966-38299016	AG09309	skin:	n/a
14	chr7:38315964-38316014	Hepatocyte	liver:	n/a
15	chr7:38294113-38294163	SKMC	muscle:	n/a
16	chr7:38298966-38299016	HUVEC	blood vessel:	n/a
17	chr7:38315964-38316014	H1-hESC	embryonic stem cell:	embryo
18	chr7:38316654-38316704	HRE	kidney:	n/a
19	chr7:38303957-38304007	HNPCEpiC	eye:	n/a
20	chr7:38298908-38298958	ovcar-3	ovarian:	n/a
21	chr7:38298908-38298958	NHBE	bronchial:	n/a
22	chr7:38309984-38310034	SAEC	small airway:	n/a
23	chr7:38299481-38299531	CMK	blood:	n/a
24	chr7:38312366-38312416	Hela-S3	cervix:	n/a
25	chr7:38298908-38298958	NB4	blood:	n/a
26	chr7:38312366-38312416	NT2-D1	testis:	n/a
27	chr7:38316654-38316704	Hepatocyte	liver:	n/a
28	chr7:38312366-38312416	NHBE	bronchial:	n/a
29	chr7:38303957-38304007	IMR90	lung:	fetal
30	chr7:38315964-38316014	K562	blood:	n/a
31	chr7:38299481-38299531	SAEC	small airway:	n/a
32	chr7:38298908-38298958	HRE	kidney:	n/a
33	chr7:38315964-38316014	AG10803	skin:	n/a
34	chr7:38294113-38294163	HMEC	breast:	n/a
35	chr7:38309984-38310034	AG10803	skin:	n/a
36	chr7:38296393-38296443	GM06990	blood:	n/a
37	chr7:38315964-38316014	GM12892	blood:	n/a
38	chr7:38312366-38312416	SK-N-SH	brain:	n/a
39	chr7:38298908-38298958	GM12878	blood:	n/a
40	chr7:38296393-38296443	HRE	kidney:	n/a
41	chr7:38316654-38316704	MCF-7	breast:	n/a
42	chr7:38309984-38310034	HRPEpiC	eye:	n/a
43	chr7:38316654-38316704	PrEC	prostate:	n/a
44	chr7:38294113-38294163	HEEpiC	esophagus:	n/a
45	chr7:38316654-38316704	HRPEpiC	eye:	n/a
46	chr7:38316654-38316704	SKMC	muscle:	n/a
47	chr7:38299481-38299531	MCF-7	breast:	n/a
48	chr7:38312366-38312416	HL-60	blood:	n/a
49	chr7:38299481-38299531	HCF	heart:	n/a
50	chr7:38315964-38316014	HRE	kidney:	n/a

(count:10 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr19:47892610..47893302-chr7:38314653..38315604,2	NB4	blood:
2	chr7:38316692..38319374-chr7:38324142..38325804,2	MCF-7	breast:
3	chr7:38322069..38325279-chr7:38325414..38329966,4	K562	blood:
4	chr7:38322069..38325279-chr7:38325414..38329966,4	K562	blood:
5	chr7:38316692..38319374-chr7:38324142..38325804,2	MCF-7	breast:
6	chr7:38325300..38328102-chr7:38356981..38359031,2	K562	blood:
7	chr7:38320521..38322943-chr7:38347615..38349997,2	K562	blood:
8	chr7:38309718..38312267-chr7:38320422..38323270,2	MCF-7	breast:
9	chr7:38309718..38312267-chr7:38320422..38323270,2	MCF-7	breast:
10	chr7:38301028..38303453-chr7:38304151..38306717,2	K562	blood:

(count:17 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AMPH-10	chr7:38305211-38305279	NONHSAT120170
2	lnc-AMPH-10	chr7:38289106-38289173	NONHSAT120166
3	lnc-AMPH-10	chr7:38292981-38293028	NONHSAT120161
4	lnc-AMPH-10	chr7:38313188-38313238	NONHSAT120169
5	lnc-AMPH-10	chr7:38292981-38293025	NONHSAT120162
6	lnc-AMPH-10	chr7:38293236-38293239	NONHSAT120162
7	lnc-AMPH-10	chr7:38289105-38289173	NONHSAT120162
8	lnc-AMPH-10	chr7:38295939-38295993	NONHSAT120166
9	lnc-AMPH-10	chr7:38313188-38313242	NONHSAT120170
10	lnc-AMPH-10	chr7:38308874-38309749	ucscGeneNc_uc003tgm_1
11	lnc-AMPH-10	chr7:38310012-38310298	ucscGeneNc_uc003tgm_1
12	lnc-AMPH-10	chr7:38310790-38310903	ucscGeneNc_uc003tgm_1
13	lnc-AMPH-10	chr7:38289105-38289173	NONHSAT120161
14	lnc-AMPH-10	chr7:38305211-38305279	NONHSAT120169
15	lnc-AMPH-9	chr7:38305937-38306406	ucscGeneNc_uc003tgl_1
16	lnc-AMPH-10	chr7:38289106-38289173	NONHSAT120167
17	lnc-AMPH-10	chr7:38295939-38296001	NONHSAT120167

No data

Variant related genes	Relation type
TRGC2	TF binding region
TRGC1	TF binding region
TRGJP	TF binding region
TRGJP1	TF binding region
TRGJ1	TF binding region
TRGJP2	TF binding region
TRGJ2	TF binding region
TRGC2	CpG island
TRGC1	CpG island
TRGJP	CpG island
TRGJP1	CpG island
TRGJ1	CpG island
TRGJP2	CpG island
TRGJ2	CpG island
ENSG00000211689	chromatin interactions
ENSG00000211695	chromatin interactions

Extended variants
information (count: 1921 )
Associated
traits (count: 89 )

Variant overlapped rSNPs/rCNVs (count:1921 , 50 per page) page: 1 2 3 4 5 6 7 ... 39

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs186972491	chr7:38286521-38286522	Weak transcription Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs146690998	chr7:38286532-38286533	Weak transcription Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs528704463	chr7:38286536-38286537	Weak transcription Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs541485231	chr7:38286544-38286545	Weak transcription Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs543969423	chr7:38286566-38286567	Weak transcription Genic enhancers Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs35753758	chr7:38286613-38286614	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs191330449	chr7:38286628-38286629	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs565320842	chr7:38286665-38286666	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs550112774	chr7:38286682-38286683	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs183134535	chr7:38286688-38286689	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs114721882	chr7:38286689-38286690	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs73130650	chr7:38286690-38286691	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs536512088	chr7:38286692-38286693	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs553013251	chr7:38286705-38286706	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs573119672	chr7:38286709-38286710	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs141940922	chr7:38286721-38286722	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs112230460	chr7:38286755-38286756	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs187737845	chr7:38286766-38286767	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs578142865	chr7:38286769-38286770	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs543938524	chr7:38286772-38286773	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs563634012	chr7:38286783-38286784	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs573968518	chr7:38286795-38286796	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs189787999	chr7:38286796-38286797	Weak transcription Strong transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs555299589	chr7:38286863-38286864	Strong transcription Genic enhancers Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs559776152	chr7:38286911-38286912	Strong transcription Genic enhancers Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs56217039	chr7:38286963-38286964	Strong transcription Genic enhancers Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
27	rs183063501	chr7:38286964-38286965	Strong transcription Genic enhancers Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs113560172	chr7:38286968-38286969	Strong transcription Genic enhancers Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs551554021	chr7:38286977-38286978	Strong transcription Genic enhancers Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs200568418	chr7:38286997-38286998	Strong transcription Genic enhancers Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs187785304	chr7:38287016-38287017	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs192656696	chr7:38287024-38287025	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs550274477	chr7:38287025-38287026	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs369873634	chr7:38287037-38287038	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs369085227	chr7:38287038-38287039	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs185204324	chr7:38287061-38287062	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs530074373	chr7:38287067-38287068	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs188522362	chr7:38287068-38287069	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs566645304	chr7:38287095-38287096	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs150942604	chr7:38287104-38287105	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs13244639	chr7:38287133-38287134	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs575520357	chr7:38287144-38287145	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs537511406	chr7:38287199-38287200	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs557514215	chr7:38287223-38287224	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs369257141	chr7:38287230-38287231	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs574109139	chr7:38287300-38287301	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs542642681	chr7:38287328-38287329	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs559742243	chr7:38287349-38287350	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs371180751	chr7:38287363-38287364	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs552296612	chr7:38287365-38287366	Strong transcription Transcr. at gene 5' and 3' Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:89)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Lynch syndrome	18415027	CNVD
Biliary cancer	19435499	CNVD
Cancer	16751803	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Wilms tumour	21544195	CNVD
Glioblastoma multiforme	17387387	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	18923191	CNVD
Glioma	21971842	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
colon cancer	17210682	CNVD
Lung adenocarcinoma	21810691	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Colorectal cancer	19359472	CNVD
Hypothalamic hamartomas	18252217	CNVD
Human rectal carcinomas	16397240	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Medulloblastoma	18056178	CNVD
Basal cell lymphoma	17170743	CNVD
Ewing''s sarcoma	21437220	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Lung cancer	18438408	CNVD
small cell lung cancer	20016488	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Autism	22495311	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Cancer	21637783	CNVD
Squamous cell cancer	20885788	CNVD
Breast cancer	16397240	CNVD
Non-small cell lung cancer	21829676	CNVD
Glioblastoma multiforme	17002787	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Glioblastoma multiforme	18628472	CNVD
Cancer	21183584	CNVD
Breast cancer	21785460	CNVD
Follicular lymphoma	20505157	CNVD
Williams-beuren syndrome	22470819	CNVD
Renal cell carcinoma	18765545	CNVD
Breast cancer	21364760	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	21251322	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Multiple myeloma	16461302	CNVD
Glioblastoma multiforme	21750150	CNVD
Hepatocellular carcinoma	16750200	CNVD
Prostate cancer	18632612	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Acute myeloid leukemia	17237825	CNVD
Breast cancer	17899364	CNVD
Breast cancer	20409316	CNVD
Acute monocytic leukemia	16498392	CNVD
Myelofibrosis	22110671	CNVD
Colorectal cancer	21645411	CNVD
Colorectal cancer	19455253	CNVD
Glioblastoma multiforme	22286061	CNVD
T-cell acute lymphoblastic leukemia	19406988	CNVD
Sezary syndrome	18413736	CNVD
Gastric cancer	24379144	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Pancreatic cancer	17952125	CNVD
Schizophrenia	23813976	CNVD
Schizophrenia	20967226	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
Cancer	20164919	CNVD
Neuroblastoma	19536264	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:243 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:38273800-38292200	Weak transcription	Thymus	Thymus
2	chr7:38273800-38305400	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
3	chr7:38276800-38295600	Weak transcription	Primary hematopoietic stem cells	blood
4	chr7:38277600-38292600	Weak transcription	Primary T helper cells PMA-I stimulated	--
5	chr7:38277600-38292600	Weak transcription	Primary T helper cells fromperipheralblood	blood
6	chr7:38278000-38290800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
7	chr7:38278200-38287600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
8	chr7:38281200-38287200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
9	chr7:38283200-38287800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
10	chr7:38283400-38286800	Weak transcription	Primary neutrophils fromperipheralblood	blood
11	chr7:38283600-38289200	Weak transcription	Monocytes-CD14+_RO01746	blood
12	chr7:38283800-38289400	Strong transcription	Dnd41	blood
13	chr7:38284200-38287000	Genic enhancers	Primary T cells fromperipheralblood	blood
14	chr7:38285000-38287600	Weak transcription	Fetal Thymus	thymus
15	chr7:38285600-38286800	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
16	chr7:38285800-38287000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
17	chr7:38286000-38286600	Weak transcription	Primary T cells from cord blood	blood
18	chr7:38286400-38287600	Weak transcription	Primary T killer memory cells from peripheral blood	blood
19	chr7:38286600-38288200	Strong transcription	Primary T cells from cord blood	blood
20	chr7:38286800-38287000	Enhancers	Primary T killer naive cells fromperipheralblood	blood
21	chr7:38286800-38288200	Strong transcription	Primary neutrophils fromperipheralblood	blood
22	chr7:38287000-38287800	Genic enhancers	Primary Natural Killer cells fromperipheralblood	blood
23	chr7:38287000-38288000	Genic enhancers	Primary T killer naive cells fromperipheralblood	blood
24	chr7:38287000-38288200	Transcr. at gene 5' and 3'	Primary T cells fromperipheralblood	blood
25	chr7:38287200-38288200	Strong transcription	Primary hematopoietic stem cells short term culture	blood
26	chr7:38287400-38288000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
27	chr7:38287600-38288000	Strong transcription	Fetal Thymus	thymus
28	chr7:38287600-38288200	Genic enhancers	Primary T helper memory cells from peripheral blood 2	blood
29	chr7:38287600-38288200	Genic enhancers	Primary T killer memory cells from peripheral blood	blood
30	chr7:38287800-38288200	Genic enhancers	Primary T helper naive cells from peripheral blood	blood
31	chr7:38287800-38288200	Transcr. at gene 5' and 3'	Primary Natural Killer cells fromperipheralblood	blood
32	chr7:38288000-38288200	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
33	chr7:38288000-38296200	Weak transcription	Fetal Thymus	thymus
34	chr7:38288200-38289000	Weak transcription	Primary T cells fromperipheralblood	blood
35	chr7:38288200-38289200	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
36	chr7:38288200-38290400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
37	chr7:38288200-38290400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
38	chr7:38288200-38292600	Weak transcription	Primary neutrophils fromperipheralblood	blood
39	chr7:38288200-38292600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
40	chr7:38288200-38295600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
41	chr7:38288200-38297000	Weak transcription	Primary T killer memory cells from peripheral blood	blood
42	chr7:38288200-38311200	Weak transcription	Primary T cells from cord blood	blood
43	chr7:38289000-38293600	Active TSS	Primary T cells fromperipheralblood	blood
44	chr7:38289200-38290000	Enhancers	Monocytes-CD14+_RO01746	blood
45	chr7:38289200-38290400	Genic enhancers	Primary Natural Killer cells fromperipheralblood	blood
46	chr7:38289400-38289600	Weak transcription	Dnd41	blood
47	chr7:38289600-38290800	Genic enhancers	Dnd41	blood
48	chr7:38290000-38293400	Weak transcription	Monocytes-CD14+_RO01746	blood
49	chr7:38290400-38290800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
50	chr7:38290400-38290800	Transcr. at gene 5' and 3'	Primary Natural Killer cells fromperipheralblood	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links