Variant report

Variant	nsv1031757
Chromosome Location	chr9:6722102-6775107
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1357)
CpG islands
(count:793)
Chromatin interactive
region (count:44)
LncRNA
region (count:7)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1357 , 50 per page) page: 1 2 3 4 5 6 7 ... 28

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:6756891-6757253	K562	blood:	n/a	n/a
2	ARID3A	chr9:6756811-6758201	HepG2	liver:	n/a	n/a
3	ARID3A	chr9:6758992-6759444	K562	blood:	n/a	n/a
4	ARID3A	chr9:6739329-6739619	HepG2	liver:	n/a	n/a
5	ARID3A	chr9:6755672-6755722	K562	blood:	n/a	n/a
6	ATF1	chr9:6753060-6753144	K562	blood:	n/a	n/a
7	ATF1	chr9:6756990-6758095	K562	blood:	n/a	n/a
8	ATF2	chr9:6758832-6759588	GM12878	blood:	n/a	n/a
9	ATF2	chr9:6757315-6757912	H1-hESC	embryonic stem cell:	n/a	n/a
10	ATF2	chr9:6758832-6759575	GM12878	blood:	n/a	n/a
11	ATF2	chr9:6722727-6723186	GM12878	blood:	n/a	n/a
12	ATF2	chr9:6750387-6751234	GM12878	blood:	n/a	n/a
13	ATF2	chr9:6722741-6723673	GM12878	blood:	n/a	n/a
14	ATF2	chr9:6771753-6772027	H1-hESC	embryonic stem cell:	n/a	n/a
15	ATF2	chr9:6757293-6758094	H1-hESC	embryonic stem cell:	n/a	n/a
16	ATF2	chr9:6756759-6758392	GM12878	blood:	n/a	n/a
17	ATF2	chr9:6771687-6772129	H1-hESC	embryonic stem cell:	n/a	n/a
18	ATF2	chr9:6750570-6751254	GM12878	blood:	n/a	n/a
19	ATF2	chr9:6756928-6758082	GM12878	blood:	n/a	n/a
20	ATF3	chr9:6757524-6758154	A549	lung:	n/a	chr9:6757929-6757949 chr9:6757940-6757960 chr9:6757949-6757958 chr9:6757940-6757949 chr9:6757953-6757962
21	ATF3	chr9:6757570-6758187	GM12878	blood:	n/a	chr9:6757929-6757949 chr9:6757940-6757960 chr9:6757949-6757958 chr9:6757940-6757949 chr9:6757953-6757962
22	ATF3	chr9:6757154-6757557	K562	blood:	n/a	n/a
23	ATF3	chr9:6757772-6758138	K562	blood:	n/a	chr9:6757929-6757949 chr9:6757940-6757960 chr9:6757949-6757958 chr9:6757940-6757949 chr9:6757953-6757962
24	ATF3	chr9:6757549-6758137	H1-hESC	embryonic stem cell:	n/a	chr9:6757929-6757949 chr9:6757940-6757960 chr9:6757949-6757958 chr9:6757940-6757949 chr9:6757953-6757962
25	ATF3	chr9:6757514-6757784	K562	blood:	n/a	n/a
26	ATF3	chr9:6757678-6758138	H1-hESC	embryonic stem cell:	n/a	chr9:6757929-6757949 chr9:6757940-6757960 chr9:6757949-6757958 chr9:6757940-6757949 chr9:6757953-6757962
27	ATF3	chr9:6757789-6758049	GM12878	blood:	n/a	chr9:6757929-6757949 chr9:6757940-6757960 chr9:6757949-6757958 chr9:6757940-6757949 chr9:6757953-6757962
28	ATF3	chr9:6757628-6758216	HepG2	liver:	n/a	chr9:6757929-6757949 chr9:6757940-6757960 chr9:6757949-6757958 chr9:6757940-6757949 chr9:6757953-6757962
29	ATF3	chr9:6757468-6758055	A549	lung:	n/a	chr9:6757929-6757949 chr9:6757940-6757960 chr9:6757949-6757958 chr9:6757940-6757949 chr9:6757953-6757962
30	ATF3	chr9:6757790-6758075	K562	blood:	n/a	chr9:6757929-6757949 chr9:6757940-6757960 chr9:6757949-6757958 chr9:6757940-6757949 chr9:6757953-6757962
31	ATF3	chr9:6757652-6758141	HepG2	liver:	n/a	chr9:6757929-6757949 chr9:6757940-6757960 chr9:6757949-6757958 chr9:6757940-6757949 chr9:6757953-6757962
32	BACH1	chr9:6758576-6759166	H1-hESC	embryonic stem cell:	n/a	n/a
33	BACH1	chr9:6765406-6765470	H1-hESC	embryonic stem cell:	n/a	n/a
34	BACH1	chr9:6757224-6758261	H1-hESC	embryonic stem cell:	n/a	n/a
35	BACH1	chr9:6764615-6764768	H1-hESC	embryonic stem cell:	n/a	chr9:6764754-6764768
36	BATF	chr9:6757171-6757975	GM12878	blood:	n/a	n/a
37	BATF	chr9:6759129-6759503	GM12878	blood:	n/a	n/a
38	BATF	chr9:6723227-6723565	GM12878	blood:	n/a	n/a
39	BATF	chr9:6722711-6723091	GM12878	blood:	n/a	n/a
40	BATF	chr9:6750653-6751296	GM12878	blood:	n/a	n/a
41	BCL11A	chr9:6750696-6750991	GM12878	blood:	n/a	chr9:6750723-6750732
42	BCL11A	chr9:6750615-6751060	GM12878	blood:	n/a	chr9:6750723-6750732
43	BCL11A	chr9:6771770-6772048	H1-hESC	embryonic stem cell:	n/a	n/a
44	BCL11A	chr9:6723143-6723561	GM12878	blood:	n/a	n/a
45	BCL11A	chr9:6722699-6723018	GM12878	blood:	n/a	n/a
46	BCL3	chr9:6726224-6726550	GM12878	blood:	n/a	n/a
47	BCL3	chr9:6757015-6758036	A549	lung:	n/a	chr9:6757996-6758009
48	BCL3	chr9:6757504-6758022	A549	lung:	n/a	chr9:6757996-6758009
49	BCL3	chr9:6757389-6758173	GM12878	blood:	n/a	chr9:6757996-6758009
50	BCLAF1	chr9:6756860-6758390	GM12878	blood:	n/a	chr9:6757996-6758009

(count:793 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:6758140-6758190	BJ	skin:	n/a
2	chr9:6758853-6758903	CMK	blood:	n/a
3	chr9:6761072-6761122	HCF	heart:	n/a
4	chr9:6758935-6758985	AG04449	skin:	fetal
5	chr9:6757912-6757962	A549	lung:	n/a
6	chr9:6758935-6758985	PFSK-1	brain:	n/a
7	chr9:6757781-6757831	AG04449	skin:	fetal
8	chr9:6758683-6758733	NHDF-neo	bronchial:	n/a
9	chr9:6731623-6731673	HRCEpiC	kidney:	n/a
10	chr9:6758546-6758596	A549	lung:	n/a
11	chr9:6757826-6757876	U87	brain:	n/a
12	chr9:6758546-6758596	HL-60	blood:	n/a
13	chr9:6757781-6757831	SK-N-MC	brain:	n/a
14	chr9:6758935-6758985	SK-N-SH_RA	brain:	n/a
15	chr9:6758853-6758903	HepG2	liver:	n/a
16	chr9:6757347-6757397	A549	lung:	n/a
17	chr9:6758546-6758596	ProgFib	skin:	n/a
18	chr9:6757347-6757397	HAEpiC	amniotic membrane:	n/a
19	chr9:6757912-6757962	MCF10A-Er-Src	breast:	n/a
20	chr9:6758683-6758733	Hela-S3	cervix:	n/a
21	chr9:6758683-6758733	HRCEpiC	kidney:	n/a
22	chr9:6731623-6731673	ECC-1	luminal epithelium:	n/a
23	chr9:6757347-6757397	K562	blood:	n/a
24	chr9:6757347-6757397	U87	brain:	n/a
25	chr9:6758140-6758190	BE2_C	brain:	n/a
26	chr9:6757146-6757196	GM12891	blood:	n/a
27	chr9:6757826-6757876	HRPEpiC	eye:	n/a
28	chr9:6758683-6758733	A549	lung:	n/a
29	chr9:6758853-6758903	HL-60	blood:	n/a
30	chr9:6758546-6758596	GM06990	blood:	n/a
31	chr9:6755109-6755159	HAEpiC	amniotic membrane:	n/a
32	chr9:6758546-6758596	SKMC	muscle:	n/a
33	chr9:6757912-6757962	CMK	blood:	n/a
34	chr9:6731623-6731673	ProgFib	skin:	n/a
35	chr9:6731623-6731673	NH-A	brain:	n/a
36	chr9:6757781-6757831	LNCaP	prostate:	n/a
37	chr9:6757826-6757876	BJ	skin:	n/a
38	chr9:6758683-6758733	PrEC	prostate:	n/a
39	chr9:6758140-6758190	LNCaP	prostate:	n/a
40	chr9:6757146-6757196	NHDF-neo	bronchial:	n/a
41	chr9:6757347-6757397	HIPEpiC	eye:	n/a
42	chr9:6755109-6755159	NH-A	brain:	n/a
43	chr9:6731623-6731673	AG04449	skin:	fetal
44	chr9:6757146-6757196	K562	blood:	n/a
45	chr9:6758683-6758733	GM12891	blood:	n/a
46	chr9:6758683-6758733	T-47D	breast:	n/a
47	chr9:6758935-6758985	IMR90	lung:	fetal
48	chr9:6758853-6758903	LNCaP	prostate:	n/a
49	chr9:6758853-6758903	A549	lung:	n/a
50	chr9:6757347-6757397	IMR90	lung:	fetal

(count:44 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr17:45727006..45727831-chr9:6757854..6758764,2	HCT-116	colon:
2	chr9:6668807..6671531-chr9:6755488..6757060,2	K562	blood:
3	chr2:219187766..219188395-chr9:6757084..6757687,2	NB4	blood:
4	chr9:6751286..6753075-chr9:6755508..6757503,2	MCF-7	breast:
5	chr9:6711589..6718151-chr9:6755774..6759657,12	MCF-7	breast:
6	chr9:6765179..6766927-chr9:6770237..6771845,2	K562	blood:
7	chr7:86781908..86782653-chr9:6757524..6758733,3	Hela-S3	cervix:
8	chr9:6747740..6749345-chr9:6756036..6758918,2	MCF-7	breast:
9	chr9:6749197..6752825-chr9:6755235..6757236,4	K562	blood:
10	chr1:78469866..78470559-chr9:6757407..6758029,2	NB4	blood:
11	chr1:63833144..63833741-chr9:6757006..6757570,2	NB4	blood:
12	chr9:6757021..6759532-chr9:6768470..6771017,3	K562	blood:
13	chr11:57102959..57103791-chr9:6757018..6757636,2	NB4	blood:
14	chr9:6714844..6717578-chr9:6754943..6759087,4	MCF-7	breast:
15	chr9:6725196..6728190-chr9:6756447..6759048,2	MCF-7	breast:
16	chr22:39077394..39078187-chr9:6757291..6757887,2	HCT-116	colon:
17	chr9:6757988..6759532-chr9:6768470..6771009,2	K562	blood:
18	chr9:6756506..6759336-chr9:6761694..6766158,6	MCF-7	breast:
19	chr9:6749197..6752825-chr9:6755235..6757236,4	K562	blood:
20	chr9:6679734..6682958-chr9:6730915..6733550,3	MCF-7	breast:
21	chr9:6354073..6354743-chr9:6738989..6739892,3	K562	blood:
22	chr11:88070952..88071704-chr9:6757255..6758140,2	NB4	blood:
23	chr9:6722888..6726785-chr9:6754807..6757177,3	K562	blood:
24	chr1:201979647..201980421-chr9:6757390..6758317,2	HCT-116	colon:
25	chr9:6411580..6414419-chr9:6755713..6757647,2	K562	blood:
26	chr9:6747740..6749345-chr9:6756036..6758918,2	MCF-7	breast:
27	chr9:6714309..6715981-chr9:6723655..6726584,2	MCF-7	breast:
28	chr9:6765179..6766927-chr9:6770237..6771845,2	K562	blood:
29	chr1:24117621..24118528-chr9:6757285..6757921,2	Hela-S3	cervix:
30	chr9:6706468..6709007-chr9:6764056..6766511,2	MCF-7	breast:
31	chr9:6751679..6753304-chr9:6755614..6757783,2	MCF-7	breast:
32	chr9:6702391..6705446-chr9:6756717..6760058,5	MCF-7	breast:
33	chr9:6714855..6717847-chr9:6737862..6741209,3	MCF-7	breast:
34	chr6:26216402..26217347-chr9:6757097..6757962,2	Hela-S3	cervix:
35	chr9:6766833..6770674-chr9:6780008..6783723,3	K562	blood:
36	chr9:6716286..6718322-chr9:6724305..6726614,2	MCF-7	breast:
37	chr9:6749158..6750730-chr9:6754623..6757370,3	K562	blood:
38	chr17:4458410..4459064-chr9:6757173..6757817,2	NB4	blood:
39	chr9:6751286..6753075-chr9:6755508..6757503,2	MCF-7	breast:
40	chr9:6413251..6414875-chr9:6756450..6759044,2	K562	blood:
41	chr9:6757388..6759261-chr9:6764601..6766785,2	MCF-7	breast:
42	chr9:6749158..6750730-chr9:6754623..6757370,3	K562	blood:
43	chr9:6722888..6726785-chr9:6754807..6757177,3	K562	blood:
44	chr12:49245554..49246083-chr9:6757387..6757976,2	Hela-S3	cervix:

(count:7 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-KDM4C-1	chr9:6726946-6727438	ENSG00000225489.2
2	lnc-GLDC-1	chr9:6748703-6748981	NONHSAT130164
3	lnc-KDM4C-1	chr9:6726946-6727438	ENSG00000225489.1
4	lnc-SNRPEP2-1	chr9:6734598-6735076	NONHSAT130163
5	lnc-KDM4C-1	chr9:6723527-6723630	ENSG00000225489.1
6	lnc-KDM4C-1	chr9:6726503-6726619	ENSG00000225489.2
7	lnc-KDM4C-1	chr9:6726503-6726619	ENSG00000225489.1

No data

Variant related genes	Relation type
SNRPEP2	TF binding region
KDM4C	TF binding region
ENSG00000231108	TF binding region
SNRPEP2	CpG island
KDM4C	CpG island
ENSG00000231108	CpG island
ENSG00000187990	chromatin interactions
ENSG00000273338	chromatin interactions
ENSG00000229611	chromatin interactions
ENSG00000225489	chromatin interactions
ENSG00000228274	chromatin interactions
ENSG00000149136	chromatin interactions
ENSG00000135164	chromatin interactions
ENSG00000127838	chromatin interactions
ENSG00000132382	chromatin interactions
ENSG00000163435	chromatin interactions
ENSG00000088035	chromatin interactions
ENSG00000100216	chromatin interactions
ENSG00000162616	chromatin interactions
ENSG00000107077	chromatin interactions
ENSG00000108424	chromatin interactions
ENSG00000174243	chromatin interactions
ENSG00000168274	chromatin interactions
ENSG00000109861	chromatin interactions
ENSG00000011009	chromatin interactions
ENSG00000231381	chromatin interactions
ENSG00000256968	chromatin interactions
ENSG00000147854	chromatin interactions

Extended variants
information (count: 2838 )
Associated
traits (count: 107 )

Variant overlapped rSNPs/rCNVs (count:2838 , 50 per page) page: 1 2 3 4 5 6 7 ... 57

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2996060	chr9:6722102-6722103	Weak transcription Enhancers Strong transcription Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs563906251	chr9:6722107-6722108	Weak transcription Enhancers Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
3	rs531139362	chr9:6722157-6722158	Weak transcription Enhancers Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
4	rs543291473	chr9:6722166-6722167	Weak transcription Enhancers Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
5	rs115662649	chr9:6722167-6722168	Weak transcription Enhancers Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
6	rs142496594	chr9:6722190-6722191	Weak transcription Enhancers Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
7	rs2990659	chr9:6722212-6722213	Weak transcription Enhancers Strong transcription Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs546968772	chr9:6722263-6722264	Weak transcription Enhancers Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
9	rs571777989	chr9:6722285-6722286	Weak transcription Enhancers Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
10	rs532628135	chr9:6722286-6722287	Weak transcription Enhancers Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
11	rs369175709	chr9:6722296-6722297	Weak transcription Enhancers Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
12	rs190277919	chr9:6722308-6722309	Weak transcription Enhancers Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
13	rs569808581	chr9:6722352-6722353	Weak transcription Enhancers Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
14	rs536979487	chr9:6722362-6722363	Weak transcription Enhancers Strong transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
15	rs6477104	chr9:6722393-6722394	Weak transcription Enhancers Strong transcription Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs577589754	chr9:6722439-6722440	Enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs370785724	chr9:6722443-6722444	Enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs180678358	chr9:6722448-6722449	Enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs552542456	chr9:6722449-6722450	Enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs6477105	chr9:6722459-6722460	Enhancers Strong transcription Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs185391514	chr9:6722466-6722467	Enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs190887654	chr9:6722484-6722485	Enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs150932560	chr9:6722485-6722486	Enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs368905637	chr9:6722515-6722516	Enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs143801827	chr9:6722516-6722517	Enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs371707720	chr9:6722517-6722518	Enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs561571188	chr9:6722519-6722520	Enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs71315551	chr9:6722530-6722531	Enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs188562677	chr9:6722616-6722617	Enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs140771401	chr9:6722628-6722629	Enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs565277429	chr9:6722648-6722649	Enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs191759759	chr9:6722649-6722650	Enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs551036166	chr9:6722653-6722654	Enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs569217594	chr9:6722692-6722693	Enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs183722970	chr9:6722713-6722714	Enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs7029588	chr9:6722732-6722733	Enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs567265374	chr9:6722733-6722734	Enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs534603232	chr9:6722755-6722756	Enhancers Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs552579114	chr9:6722803-6722804	Enhancers Strong transcription Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
40	rs201837027	chr9:6722821-6722822	Enhancers Strong transcription Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
41	rs571209354	chr9:6722835-6722836	Enhancers Strong transcription Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
42	rs538223503	chr9:6722837-6722838	Enhancers Strong transcription Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
43	rs147817719	chr9:6722853-6722854	Enhancers Strong transcription Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
44	rs575203579	chr9:6722860-6722861	Enhancers Strong transcription Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
45	rs141366199	chr9:6722894-6722895	Enhancers Strong transcription Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
46	rs555191812	chr9:6722899-6722900	Enhancers Strong transcription Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
47	rs548150657	chr9:6722912-6722913	Enhancers Strong transcription Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a
48	rs34280544	chr9:6722937-6722938	Enhancers Strong transcription Weak transcription Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs7028933	chr9:6722942-6722943	Enhancers Strong transcription Weak transcription Flanking Active TSS	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs559854118	chr9:6722976-6722977	Enhancers Strong transcription Weak transcription Flanking Active TSS	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:107)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Intracranial aneurysm	16715129	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Disorders of sex development	22290220	CNVD
Glioblastoma multiforme	21080181	CNVD
Sudden cardiac death	19188705	CNVD
Non-small cell lung cancer	21829676	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21183584	CNVD
Non-small cell lung cancer	21952639	CNVD
Disorders of sex development	21048976	CNVD
Neuroblastoma	18923191	CNVD
Intellectual disability	22102821	CNVD
abnormal development	18461090	CNVD
Honadal dysgenesis	21048976	CNVD
Medulloblastoma	21979893	CNVD
Lung cancer	16740712	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	16608533	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cervical cancer	21063398	CNVD
Retinoblastoma	22278416	CNVD
Splenic marginal zone lymphoma	18492102	CNVD
Melanoma	18172304	CNVD
Biliary cancer	19435499	CNVD
Gastric cancer	21586687	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Myopathy	18421352	CNVD
Neuroblastoma	18664255	CNVD
Acute lymphoblastic leukemia	18957548	CNVD
Myeloproliferative neoplasm	17564968	CNVD
Malignant meningioma	17937814	CNVD
Glioma	21971842	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Ewing''s sarcoma	21437220	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Hepatocellular carcinoma	22174799	CNVD
Oligodendroglial tumors	17285580	CNVD
Cutaneous squamous cell carcinomas	19131950	CNVD
Small bowel adenocarcinoma	21586687	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
microdeletion syndrome	16199537	CNVD
Non-syndromic sensorineural hearing loss	21987784	CNVD
Cancer	20164919	CNVD
Chronic myeloid leukemia	21384125	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
small cell lung cancer	20016488	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Developmental delay	21147756	CNVD
Lung cancer	18438408	CNVD
XY gonadal dysgenesis	20685758	CNVD
Urothelial carcinoma	21177765	CNVD
Oral cancer	21386901	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Myelodysplastic syndrome	21251322	CNVD
Breast cancer	21785460	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Myelofibrosis	22110671	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Hepatocellular carcinoma	18803288	CNVD
Breast cancer	21364760	CNVD
Metastatic melanoma	18483359	CNVD
Glioblastoma	19074898	CNVD
Malignant melanoma	19074898	CNVD
Prostate cancer	16573809	CNVD
Metanephric adenoma	20802469	CNVD
Medulloblastoma	16783165	CNVD
Dyslexia	22102821	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Medullary thyroid carcinoma	18765511	CNVD
Schizophrenia	21346763	CNVD
early-passage human iPS cells	21368824	CNVD
Autism	20858261	CNVD
Epilepsy	20858261	CNVD
Mental retardation	20858261	CNVD
Breast cancer	22522925	CNVD
Schizophrenia	23813976	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:990 , 50 per page) page: 1 2 3 4 5 6 7 ... 20

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:6717000-6722400	Weak transcription	Primary B cells from cord blood	blood
2	chr9:6717200-6725200	Weak transcription	Pancreas	Pancrea
3	chr9:6717200-6728400	Weak transcription	Fetal Intestine Small	intestine
4	chr9:6717800-6728000	Weak transcription	Duodenum Mucosa	Duodenum
5	chr9:6720800-6726800	Strong transcription	Liver	Liver
6	chr9:6721800-6723200	Enhancers	Primary B cells from peripheral blood	blood
7	chr9:6722000-6722400	Flanking Active TSS	GM12878-XiMat	blood
8	chr9:6722400-6722800	Enhancers	GM12878-XiMat	blood
9	chr9:6722400-6724200	Enhancers	Primary B cells from cord blood	blood
10	chr9:6722800-6724200	Flanking Active TSS	GM12878-XiMat	blood
11	chr9:6723000-6723600	Active TSS	Rectal Mucosa Donor 29	rectum
12	chr9:6723200-6723600	Flanking Active TSS	Primary B cells from peripheral blood	blood
13	chr9:6723200-6724400	Enhancers	Cortex derived primary cultured neurospheres	brain
14	chr9:6723400-6724600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
15	chr9:6723600-6723800	Enhancers	Primary B cells from peripheral blood	blood
16	chr9:6723600-6725400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr9:6723800-6724800	Weak transcription	Primary B cells from peripheral blood	blood
18	chr9:6724200-6724400	Transcr. at gene 5' and 3'	GM12878-XiMat	blood
19	chr9:6724200-6749200	Weak transcription	Primary B cells from cord blood	blood
20	chr9:6724400-6725200	Genic enhancers	GM12878-XiMat	blood
21	chr9:6724800-6725000	Enhancers	Primary B cells from peripheral blood	blood
22	chr9:6725200-6725400	Genic enhancers	Pancreas	Pancrea
23	chr9:6725200-6734600	Weak transcription	GM12878-XiMat	blood
24	chr9:6725400-6726000	Weak transcription	Pancreas	Pancrea
25	chr9:6726800-6737800	Weak transcription	Liver	Liver
26	chr9:6732600-6733800	Enhancers	HepG2	liver
27	chr9:6733200-6734200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
28	chr9:6733400-6733600	Flanking Bivalent TSS/Enh	iPS DF 19.11 Cell Line	embryonic stem cell
29	chr9:6738600-6739800	Enhancers	Primary B cells from peripheral blood	blood
30	chr9:6742800-6743600	Enhancers	HepG2	liver
31	chr9:6743600-6747800	Weak transcription	HepG2	liver
32	chr9:6749200-6750200	Enhancers	Primary B cells from cord blood	blood
33	chr9:6749200-6750200	Enhancers	Primary T cells fromperipheralblood	blood
34	chr9:6749400-6750200	Enhancers	Primary B cells from peripheral blood	blood
35	chr9:6749800-6750400	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
36	chr9:6750000-6750200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
37	chr9:6750000-6750400	Enhancers	Primary T helper cells PMA-I stimulated	--
38	chr9:6750000-6750400	Enhancers	Primary T helper cells fromperipheralblood	blood
39	chr9:6750000-6750400	Enhancers	Primary T regulatory cells fromperipheralblood	blood
40	chr9:6750000-6750400	Enhancers	GM12878-XiMat	blood
41	chr9:6750000-6750600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
42	chr9:6750000-6751000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
43	chr9:6750000-6751200	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
44	chr9:6750200-6750400	Active TSS	Monocytes-CD14+_RO01746	blood
45	chr9:6750200-6750600	Active TSS	Primary mononuclear cells fromperipheralblood	Blood
46	chr9:6750200-6751000	Flanking Active TSS	Primary T cells fromperipheralblood	blood
47	chr9:6750200-6751000	Enhancers	Primary hematopoietic stem cells short term culture	blood
48	chr9:6750200-6751000	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
49	chr9:6750200-6751000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
50	chr9:6750200-6751200	Enhancers	Primary monocytes fromperipheralblood	blood

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