Variant report

Variant	nsv1032051
Chromosome Location	chr5:104489459-104996814
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1233)
CpG islands
(count:184)
Chromatin interactive
region (count:105)
LncRNA
region (count:4)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1233 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr5:104728602-104728921	K562	blood:	n/a	n/a
2	ARID3A	chr5:104729126-104729280	K562	blood:	n/a	n/a
3	ARID3A	chr5:104574137-104574841	K562	blood:	n/a	n/a
4	ARID3A	chr5:104726542-104727019	K562	blood:	n/a	n/a
5	ARID3A	chr5:104565880-104566023	K562	blood:	n/a	n/a
6	ARID3A	chr5:104599139-104599705	K562	blood:	n/a	n/a
7	ATF1	chr5:104728486-104728895	K562	blood:	n/a	n/a
8	ATF1	chr5:104566225-104566645	K562	blood:	n/a	n/a
9	ATF1	chr5:104733331-104733371	K562	blood:	n/a	n/a
10	ATF1	chr5:104599299-104599581	K562	blood:	n/a	n/a
11	ATF3	chr5:104890433-104890632	K562	blood:	n/a	n/a
12	BACH1	chr5:104779909-104779930	K562	blood:	n/a	n/a
13	BACH1	chr5:104923763-104924073	K562	blood:	n/a	n/a
14	BACH1	chr5:104541248-104541265	H1-hESC	embryonic stem cell:	n/a	n/a
15	BACH1	chr5:104923724-104924138	H1-hESC	embryonic stem cell:	n/a	n/a
16	BACH1	chr5:104738330-104738373	K562	blood:	n/a	n/a
17	BCL11A	chr5:104502865-104503067	H1-hESC	embryonic stem cell:	n/a	n/a
18	BHLHE40	chr5:104928859-104929002	K562	blood:	n/a	n/a
19	BHLHE40	chr5:104728493-104728748	K562	blood:	n/a	n/a
20	BRCA1	chr5:104868861-104868905	Hela-S3	cervix:	n/a	n/a
21	CBX3	chr5:104728363-104729015	K562	blood:	n/a	n/a
22	CBX3	chr5:104939067-104939376	K562	blood:	n/a	n/a
23	CBX3	chr5:104728451-104728993	K562	blood:	n/a	n/a
24	CBX3	chr5:104923689-104924055	K562	blood:	n/a	n/a
25	CBX3	chr5:104796414-104796740	K562	blood:	n/a	n/a
26	CBX3	chr5:104796463-104796676	K562	blood:	n/a	n/a
27	CBX3	chr5:104755081-104755354	K562	blood:	n/a	n/a
28	CBX3	chr5:104699005-104699210	K562	blood:	n/a	n/a
29	CBX3	chr5:104866626-104866912	K562	blood:	n/a	n/a
30	CBX3	chr5:104866542-104866887	K562	blood:	n/a	n/a
31	CBX3	chr5:104755037-104755389	K562	blood:	n/a	n/a
32	CBX3	chr5:104686453-104686733	K562	blood:	n/a	n/a
33	CBX3	chr5:104928778-104929345	K562	blood:	n/a	n/a
34	CCNT2	chr5:104599218-104599525	K562	blood:	n/a	n/a
35	CCNT2	chr5:104890165-104890637	K562	blood:	n/a	n/a
36	CCNT2	chr5:104727769-104728552	K562	blood:	n/a	n/a
37	CCNT2	chr5:104566220-104566624	K562	blood:	n/a	n/a
38	CCNT2	chr5:104928811-104929257	K562	blood:	n/a	n/a
39	CEBPB	chr5:104953385-104953682	K562	blood:	n/a	n/a
40	CEBPB	chr5:104952245-104952716	MCF-7	breast:	n/a	n/a
41	CEBPB	chr5:104876322-104876498	K562	blood:	n/a	n/a
42	CEBPB	chr5:104968601-104968824	HepG2	liver:	n/a	chr5:104968706-104968717
43	CEBPB	chr5:104709810-104710130	A549	lung:	n/a	n/a
44	CEBPB	chr5:104872469-104872684	K562	blood:	n/a	n/a
45	CEBPB	chr5:104613257-104613341	K562	blood:	n/a	n/a
46	CEBPB	chr5:104965103-104965346	HepG2	liver:	n/a	chr5:104965201-104965212
47	CEBPB	chr5:104510149-104510395	H1-hESC	embryonic stem cell:	n/a	chr5:104510228-104510239
48	CEBPB	chr5:104709840-104710114	HepG2	liver:	n/a	n/a
49	CEBPB	chr5:104876027-104876498	HepG2	liver:	n/a	chr5:104876097-104876108
50	CEBPB	chr5:104575874-104575947	HepG2	liver:	n/a	chr5:104575897-104575908 chr5:104575896-104575907

(count:184 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr5:104854808-104854858	AG04449	skin:	fetal
2	chr5:104854808-104854858	AG04449	skin:	fetal
3	chr5:104854808-104854858	HCT-116	colon:	n/a
4	chr5:104728427-104728477	AG04449	skin:	fetal
5	chr5:104854808-104854858	HepG2	liver:	n/a
6	chr5:104728427-104728477	HPAEpiC	pulmonary alveolar:	n/a
7	chr5:104728220-104728270	AG09309	skin:	n/a
8	chr5:104854808-104854858	NT2-D1	testis:	n/a
9	chr5:104728427-104728477	PrEC	prostate:	n/a
10	chr5:104728220-104728270	SK-N-SH_RA	brain:	n/a
11	chr5:104728220-104728270	MCF10A-Er-Src	breast:	n/a
12	chr5:104728220-104728270	AG04450	lung:	fetal
13	chr5:104728427-104728477	BE2_C	brain:	n/a
14	chr5:104728427-104728477	K562	blood:	n/a
15	chr5:104854808-104854858	HCPEpiC	choroid plexus:	n/a
16	chr5:104728220-104728270	HepG2	liver:	n/a
17	chr5:104854808-104854858	NB4	blood:	n/a
18	chr5:104728427-104728477	HAEpiC	amniotic membrane:	n/a
19	chr5:104728220-104728270	NHBE	bronchial:	n/a
20	chr5:104854808-104854858	HCM	heart:	n/a
21	chr5:104728427-104728477	SAEC	small airway:	n/a
22	chr5:104854808-104854858	H1-hESC	embryonic stem cell:	embryo
23	chr5:104728220-104728270	HRPEpiC	eye:	n/a
24	chr5:104854808-104854858	HNPCEpiC	eye:	n/a
25	chr5:104728427-104728477	HNPCEpiC	eye:	n/a
26	chr5:104854808-104854858	HL-60	blood:	n/a
27	chr5:104854808-104854858	HPAEpiC	pulmonary alveolar:	n/a
28	chr5:104728220-104728270	GM12878	blood:	n/a
29	chr5:104728220-104728270	Hepatocyte	liver:	n/a
30	chr5:104728220-104728270	MCF-7	breast:	n/a
31	chr5:104728427-104728477	HRE	kidney:	n/a
32	chr5:104728427-104728477	HRPEpiC	eye:	n/a
33	chr5:104728220-104728270	HRE	kidney:	n/a
34	chr5:104854808-104854858	HRCEpiC	kidney:	n/a
35	chr5:104728220-104728270	IMR90	lung:	fetal
36	chr5:104728427-104728477	SKMC	muscle:	n/a
37	chr5:104728220-104728270	T-47D	breast:	n/a
38	chr5:104728220-104728270	NHDF-neo	bronchial:	n/a
39	chr5:104728220-104728270	SAEC	small airway:	n/a
40	chr5:104728220-104728270	Jurkat	blood:	n/a
41	chr5:104854808-104854858	HUVEC	blood vessel:	n/a
42	chr5:104728220-104728270	PANC-1	pancreas:	n/a
43	chr5:104728220-104728270	HCT-116	colon:	n/a
44	chr5:104728427-104728477	NH-A	brain:	n/a
45	chr5:104728427-104728477	GM06990	blood:	n/a
46	chr5:104728220-104728270	HCPEpiC	choroid plexus:	n/a
47	chr5:104854808-104854858	HIPEpiC	eye:	n/a
48	chr5:104854808-104854858	LNCaP	prostate:	n/a
49	chr5:104728220-104728270	GM06990	blood:	n/a
50	chr5:104728220-104728270	PrEC	prostate:	n/a

(count:105 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr5:104645770..104648035-chr5:104661663..104663662,2	MCF-7	breast:
2	chr5:104576197..104577737-chr5:104582724..104585208,2	K562	blood:
3	chr5:104995980..104998958-chr5:105000581..105003176,3	MCF-7	breast:
4	chr5:104565194..104566957-chr5:104571048..104573999,2	K562	blood:
5	chr5:103843512..103846064-chr5:104654970..104657716,2	K562	blood:
6	chr5:104929507..104932104-chr5:104932394..104934135,2	MCF-7	breast:
7	chr5:104805339..104808156-chr5:104810446..104813222,2	MCF-7	breast:
8	chr5:104542507..104545042-chr5:104552566..104554250,2	K562	blood:
9	chr5:104926004..104928970-chr5:104930124..104932222,3	K562	blood:
10	chr5:104805339..104808156-chr5:104810446..104813222,2	MCF-7	breast:
11	chr5:104710520..104712024-chr5:104741469..104744150,2	K562	blood:
12	chr5:104542507..104545042-chr5:104552566..104554250,2	K562	blood:
13	chr5:104524711..104526370-chr5:104889242..104892104,2	K562	blood:
14	chr5:104660610..104663385-chr5:104663843..104665843,2	K562	blood:
15	chr5:104679097..104680828-chr5:104708980..104711591,2	K562	blood:
16	chr5:104545106..104548123-chr5:104549429..104551527,3	K562	blood:
17	chr5:104733236..104736068-chr5:104886596..104888346,2	MCF-7	breast:
18	chr5:104564496..104566595-chr5:104574532..104577348,2	K562	blood:
19	chr5:104682989..104685447-chr5:104726579..104728705,2	K562	blood:
20	chr5:104950620..104953196-chr5:104960454..104963137,2	K562	blood:
21	chr5:104955524..104956144-chr5:105577134..105577974,2	MCF-7	breast:
22	chr5:104524711..104526370-chr5:104889242..104892104,2	K562	blood:
23	chr5:104551002..104553954-chr5:104571477..104574357,2	MCF-7	breast:
24	chr5:104927470..104929144-chr5:104929220..104932182,2	K562	blood:
25	chr5:104584886..104590168-chr5:104590478..104594256,4	K562	blood:
26	chr5:104528561..104530726-chr5:104532311..104534213,2	K562	blood:
27	chr5:104768629..104770858-chr5:104785097..104787270,2	K562	blood:
28	chr5:104723018..104724952-chr5:104737690..104739211,2	K562	blood:
29	chr5:104952005..104953083-chr5:105576858..105577888,8	MCF-7	breast:
30	chr5:104649160..104650852-chr5:104651591..104654211,3	K562	blood:
31	chr5:104545961..104548123-chr5:104549429..104551527,2	K562	blood:
32	chr5:104369743..104372595-chr5:104912590..104914639,2	K562	blood:
33	chr5:104604624..104606834-chr5:104613480..104615859,2	K562	blood:
34	chr5:104810915..104813579-chr5:104817384..104819206,2	MCF-7	breast:
35	chr5:104584886..104590168-chr5:104590478..104594256,4	K562	blood:
36	chr5:104886320..104887974-chr5:104890366..104891898,2	MCF-7	breast:
37	chr5:104778136..104780320-chr5:104785388..104787017,2	K562	blood:
38	chr5:104582906..104584797-chr5:104601356..104603170,2	K562	blood:
39	chr5:104582906..104584797-chr5:104601356..104603170,2	K562	blood:
40	chr5:104686842..104688917-chr5:104691899..104693400,2	K562	blood:
41	chr5:104711472..104715081-chr5:104725603..104729958,5	K562	blood:
42	chr12:23105697..23106553-chr5:104539343..104540254,2	MCF-7	breast:
43	chr5:104722652..104724763-chr5:104741861..104743629,2	K562	blood:
44	chr5:104567163..104569932-chr5:104572220..104574679,2	MCF-7	breast:
45	chr5:104482838..104485793-chr5:104489379..104492370,3	MCF-7	breast:
46	chr19:12903711..12905991-chr5:104578289..104580216,2	MCF-7	breast:
47	chr5:104926004..104928970-chr5:104930124..104932222,3	K562	blood:
48	chr5:104586940..104589611-chr5:104727738..104729575,2	K562	blood:
49	chr5:104686842..104688917-chr5:104691899..104693400,2	K562	blood:
50	chr5:104886320..104887974-chr5:104890366..104891898,2	MCF-7	breast:

(count:4 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-NUDT12-7	chr5:104581998-104582065	ENSG00000253584
2	lnc-NUDT12-7	chr5:104582013-104582067	NONHSAT103097
3	lnc-NUDT12-7	chr5:104728462-104728989	NONHSAT103097
4	lnc-NUDT12-6	chr5:104728462-104728671	ENSG00000251574

No data

Variant related genes	Relation type
ENSG00000253584	TF binding region
ENSG00000251574	TF binding region
ENSG00000253584	CpG island
ENSG00000251574	CpG island
ENSG00000145743	chromatin interactions
ENSG00000132874	chromatin interactions
ENSG00000251574	chromatin interactions

Extended variants
information (count: 5597 )
Associated
traits (count: 88 )

Variant overlapped rSNPs/rCNVs (count:5597 , 50 per page) page: 1 2 3 4 5 6 7 ... 112

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs560822068	chr5:104489471-104489472	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs146929087	chr5:104489496-104489497	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs115922360	chr5:104489513-104489514	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs546711604	chr5:104489539-104489540	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs191808728	chr5:104489562-104489563	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs184092151	chr5:104489606-104489607	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs552869051	chr5:104489656-104489657	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs78281568	chr5:104489660-104489661	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs538504488	chr5:104489664-104489665	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs554545786	chr5:104489681-104489682	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs113088193	chr5:104489717-104489718	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs534066671	chr5:104489749-104489750	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs553845449	chr5:104489779-104489780	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs573019830	chr5:104489793-104489794	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs544857505	chr5:104489908-104489909	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs565054584	chr5:104489916-104489917	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs373722565	chr5:104489998-104489999	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs575468915	chr5:104490028-104490029	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs544479344	chr5:104490034-104490035	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs560907931	chr5:104490040-104490041	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs529713289	chr5:104490055-104490056	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs546749787	chr5:104490066-104490067	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs187384418	chr5:104490087-104490088	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs532199705	chr5:104490092-104490093	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs552519333	chr5:104490119-104490120	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs33970267	chr5:104490122-104490123	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs398084362	chr5:104490130-104490131	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs398038082	chr5:104490131-104490132	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs569371996	chr5:104490215-104490216	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs556250017	chr5:104490242-104490243	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs116042760	chr5:104490303-104490304	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs137919401	chr5:104490306-104490307	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs74463865	chr5:104490337-104490338	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs143405247	chr5:104490354-104490355	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs3072397	chr5:104490414-104490415	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs5870150	chr5:104490415-104490416	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs373107622	chr5:104490416-104490417	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs397883453	chr5:104490418-104490419	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs146305547	chr5:104490523-104490524	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs189706256	chr5:104490524-104490525	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs377681646	chr5:104490529-104490530	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs539891902	chr5:104490532-104490533	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs558483710	chr5:104490535-104490536	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs558103509	chr5:104490582-104490583	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs575389361	chr5:104490586-104490587	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs544567038	chr5:104490661-104490662	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs576129257	chr5:104490677-104490678	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs182295692	chr5:104490686-104490687	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs115554244	chr5:104490692-104490693	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs574519801	chr5:104490721-104490722	Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:88)

Disease	PMID	Source
Metanephric adenoma	20802469	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Medulloblastoma	21979893	CNVD
Phyllodes tumor	17334353	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Cancer	16751803	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Melanoma	18172304	CNVD
Glioma	20126413	CNVD
Breast cancer	17393978	CNVD
Cancer	21359685	CNVD
Non-small cell lung cancer	21829676	CNVD
adenomatous polyposis	22470819	CNVD
Cancer	22429812	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Liposarcoma	21253554	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	17387387	CNVD
Breast cancer	21858162	CNVD
Leukemia	17361228	CNVD
Myelodysplastic syndrome	18508791	CNVD
5q-syndrome	17576883	CNVD
Gastric cancer	17908304	CNVD
Lung cancer	16740712	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Urothelial carcinoma	21177765	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Barrett''s syndrome	19417022	CNVD
Lung cancer	18438408	CNVD
Retinoblastoma	22278416	CNVD
Bipolar disorder	18458673	CNVD
Thyroid cancer	19087340	CNVD
Breast cancer	21785460	CNVD
Squamous cell cancer	20885788	CNVD
Hepatocellular carcinoma	16750200	CNVD
Neurodevelopmental disorder	22521361	CNVD
Prostate cancer	18632612	CNVD
Breast cancer	17133270	CNVD
Acute myeloid leukemia	20729466	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Acute myeloid leukemia	21251322	CNVD
lymphocytic leukemia	21291569	CNVD
Colorectal cancer	16272173	CNVD
Prostate cancer	16573809	CNVD
Renal cell carcinoma	18194544	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Cancer	20164920	CNVD
Myelodysplastic syndrome	21251322	CNVD
abnormal development	18461090	CNVD
Colorectal cancer	16774939	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Multiple myeloma	17550852	CNVD
Myelofibrosis	22110671	CNVD
Chronic lymphocytic leukemia	18922857	CNVD
Ovarian cancer	21720365	CNVD
Neurocytoma	17123091	CNVD
Salivary gland tumor	18059337	CNVD
Breast cancer	21509527	CNVD
Breast cancer	16608533	CNVD
Obesity	20622171	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Schizophrenia	23813976	CNVD
Lung cancer	16773561	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Schizophrenia	21346763	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:187 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:104489000-104490800	Weak transcription	Fetal Lung	lung
2	chr5:104490800-104491200	ZNF genes & repeats	Fetal Lung	lung
3	chr5:104492600-104492800	ZNF genes & repeats	Aorta	Aorta
4	chr5:104492800-104494200	Weak transcription	Aorta	Aorta
5	chr5:104494000-104495600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr5:104503600-104504400	Enhancers	HUES48 Cell Line	embryonic stem cell
7	chr5:104503800-104504400	Enhancers	ES-I3 Cell Line	embryonic stem cell
8	chr5:104503800-104504600	Enhancers	iPS-15b Cell Line	embryonic stem cell
9	chr5:104503800-104504600	Enhancers	Hela-S3	cervix
10	chr5:104504400-104505400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
11	chr5:104505800-104506000	Enhancers	ES-I3 Cell Line	embryonic stem cell
12	chr5:104512000-104512400	Active TSS	Breast Myoepithelial Primary Cells	Breast
13	chr5:104541800-104542600	Enhancers	Brain Germinal Matrix	brain
14	chr5:104550000-104550400	Enhancers	HUES48 Cell Line	embryonic stem cell
15	chr5:104550200-104550600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr5:104550200-104550600	Enhancers	HUES6 Cell Line	embryonic stem cell
17	chr5:104550200-104550600	Enhancers	iPS-20b Cell Line	embryonic stem cell
18	chr5:104550200-104550800	Enhancers	ES-I3 Cell Line	embryonic stem cell
19	chr5:104550400-104550600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
20	chr5:104550600-104552600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
21	chr5:104550800-104554800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
22	chr5:104552600-104553600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr5:104553000-104553800	Enhancers	Brain Germinal Matrix	brain
24	chr5:104553200-104554200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
25	chr5:104553600-104555200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
26	chr5:104554200-104554600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
27	chr5:104554600-104555400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
28	chr5:104554800-104555200	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
29	chr5:104555000-104556600	Enhancers	Primary hematopoietic stem cells	blood
30	chr5:104555200-104555400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
31	chr5:104555400-104555800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
32	chr5:104555800-104557400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
33	chr5:104556200-104556600	Active TSS	Primary T helper cells PMA-I stimulated	--
34	chr5:104565200-104565400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
35	chr5:104565400-104565800	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
36	chr5:104565600-104566600	Enhancers	K562	blood
37	chr5:104565800-104566800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
38	chr5:104565800-104566800	Enhancers	Colon Smooth Muscle	Colon
39	chr5:104566000-104566400	Enhancers	Primary hematopoietic stem cells short term culture	blood
40	chr5:104566200-104566800	Enhancers	Fetal Lung	lung
41	chr5:104566800-104567600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
42	chr5:104567600-104567800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
43	chr5:104575600-104576000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
44	chr5:104576000-104581000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
45	chr5:104581000-104581200	Flanking Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
46	chr5:104581200-104581400	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
47	chr5:104581200-104581600	Enhancers	HUES48 Cell Line	embryonic stem cell
48	chr5:104594000-104594200	ZNF genes & repeats	K562	blood
49	chr5:104594200-104597600	Weak transcription	K562	blood
50	chr5:104595000-104596000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links