Variant report

Variant	nsv1032135
Chromosome Location	chr7:48293104-48414154
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:819)
CpG islands
(count:245)
Chromatin interactive
region (count:7)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:819 , 50 per page) page: 1 2 3 4 5 6 7 ... 17

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ATF2	chr7:48338249-48338768	GM12878	blood:	n/a	n/a
2	ATF2	chr7:48338313-48338712	GM12878	blood:	n/a	n/a
3	ATF2	chr7:48294644-48295012	GM12878	blood:	n/a	n/a
4	BATF	chr7:48294726-48294922	GM12878	blood:	n/a	n/a
5	BATF	chr7:48294654-48294978	GM12878	blood:	n/a	n/a
6	BATF	chr7:48338311-48338717	GM12878	blood:	n/a	n/a
7	BCL11A	chr7:48338302-48338688	GM12878	blood:	n/a	n/a
8	BCL11A	chr7:48294690-48294938	GM12878	blood:	n/a	n/a
9	BCL3	chr7:48400134-48400508	GM12878	blood:	n/a	n/a
10	BCL3	chr7:48338337-48338739	GM12878	blood:	n/a	n/a
11	BCL3	chr7:48400193-48400497	GM12878	blood:	n/a	n/a
12	BCL3	chr7:48294619-48294966	GM12878	blood:	n/a	n/a
13	BHLHE40	chr7:48298658-48298686	GM12878	blood:	n/a	n/a
14	BHLHE40	chr7:48294391-48294424	GM12878	blood:	n/a	n/a
15	BRCA1	chr7:48354292-48354447	GM12878	blood:	n/a	n/a
16	CEBPB	chr7:48392408-48392683	HepG2	liver:	n/a	chr7:48392560-48392569 chr7:48392558-48392569
17	CEBPB	chr7:48294728-48295069	IMR90	lung:	n/a	n/a
18	CEBPB	chr7:48318281-48318407	Hela-S3	cervix:	n/a	n/a
19	CEBPB	chr7:48318208-48318512	A549	lung:	n/a	n/a
20	CEBPB	chr7:48293034-48293220	HepG2	liver:	n/a	chr7:48293139-48293150 chr7:48293057-48293068
21	CEBPB	chr7:48338242-48338875	IMR90	lung:	n/a	chr7:48338420-48338431 chr7:48338420-48338431 chr7:48338418-48338431 chr7:48338415-48338432
22	CEBPB	chr7:48351809-48352083	IMR90	lung:	n/a	n/a
23	CEBPB	chr7:48325066-48325403	IMR90	lung:	n/a	n/a
24	CEBPB	chr7:48350481-48350752	MCF-7	breast:	n/a	chr7:48350667-48350680 chr7:48350667-48350678
25	CEBPB	chr7:48340830-48341054	H1-hESC	embryonic stem cell:	n/a	n/a
26	CEBPB	chr7:48319620-48320074	IMR90	lung:	n/a	n/a
27	CEBPB	chr7:48350535-48350812	HepG2	liver:	n/a	chr7:48350667-48350680 chr7:48350667-48350678
28	CEBPB	chr7:48350592-48350791	IMR90	lung:	n/a	chr7:48350667-48350680 chr7:48350667-48350678
29	CEBPB	chr7:48350426-48350947	MCF-7	breast:	n/a	chr7:48350667-48350680 chr7:48350667-48350678
30	CEBPB	chr7:48318199-48318505	HepG2	liver:	n/a	n/a
31	CHD1	chr7:48383066-48383084	GM12878	blood:	n/a	n/a
32	CREB1	chr7:48294551-48295004	GM12878	blood:	n/a	n/a
33	CTCF	chr7:48376740-48376890	WERI-Rb-1	eye:	n/a	n/a
34	CTCF	chr7:48376740-48376890	GM12872	blood:	n/a	n/a
35	CTCF	chr7:48376679-48376935	LNCaP	prostate:	n/a	n/a
36	CTCF	chr7:48376777-48376821	GM12891	blood:	n/a	n/a
37	CTCF	chr7:48339279-48339454	GM13976	blood:	n/a	chr7:48339360-48339378 chr7:48339362-48339383
38	CTCF	chr7:48376740-48376890	BE2_C	brain:	n/a	n/a
39	CTCF	chr7:48339320-48339470	HPF	lung:	n/a	chr7:48339360-48339378 chr7:48339362-48339383
40	CTCF	chr7:48339234-48339480	K562	blood:	n/a	chr7:48339360-48339378 chr7:48339362-48339383
41	CTCF	chr7:48376678-48376928	NHEK	skin:	n/a	n/a
42	CTCF	chr7:48339300-48339450	AG04449	skin:	n/a	chr7:48339360-48339378 chr7:48339362-48339383
43	CTCF	chr7:48339300-48339450	MCF-7	breast:	n/a	chr7:48339360-48339378 chr7:48339362-48339383
44	CTCF	chr7:48331140-48331290	HEK293	kidney:	n/a	n/a
45	CTCF	chr7:48376720-48376870	AoAF	blood vessel:	n/a	n/a
46	CTCF	chr7:48360728-48360824	GM19240	blood:	n/a	n/a
47	CTCF	chr7:48376740-48376890	HRPEpiC	eye:	n/a	n/a
48	CTCF	chr7:48376780-48376930	GM06990	blood:	n/a	n/a
49	CTCF	chr7:48338860-48339010	HEEpiC	esophagus:	n/a	n/a
50	CTCF	chr7:48339220-48339370	HFF-Myc	foreskin:	n/a	n/a

(count:245 , 50 per page) page: 1 2 3 4 5

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:48352531-48352581	HNPCEpiC	eye:	n/a
2	chr7:48352531-48352581	HNPCEpiC	eye:	n/a
3	chr7:48352531-48352581	AG04449	skin:	fetal
4	chr7:48352531-48352581	HRCEpiC	kidney:	n/a
5	chr7:48352531-48352581	NT2-D1	testis:	n/a
6	chr7:48351895-48351945	NH-A	brain:	n/a
7	chr7:48351895-48351945	PrEC	prostate:	n/a
8	chr7:48351895-48351945	GM06990	blood:	n/a
9	chr7:48319696-48319746	HEEpiC	esophagus:	n/a
10	chr7:48319696-48319746	HCT-116	colon:	n/a
11	chr7:48352531-48352581	GM12878	blood:	n/a
12	chr7:48351895-48351945	HIPEpiC	eye:	n/a
13	chr7:48352531-48352581	MCF10A-Er-Src	breast:	n/a
14	chr7:48351895-48351945	PANC-1	pancreas:	n/a
15	chr7:48352531-48352581	HEK293	kidney:	embryo
16	chr7:48351495-48351545	NHDF-neo	bronchial:	n/a
17	chr7:48319696-48319746	HNPCEpiC	eye:	n/a
18	chr7:48319696-48319746	GM12891	blood:	n/a
19	chr7:48351895-48351945	Hepatocyte	liver:	n/a
20	chr7:48351495-48351545	GM12891	blood:	n/a
21	chr7:48319696-48319746	SKMC	muscle:	n/a
22	chr7:48351895-48351945	ovcar-3	ovarian:	n/a
23	chr7:48319696-48319746	AoSMC	blood vessel:	n/a
24	chr7:48351495-48351545	MCF-7	breast:	n/a
25	chr7:48352531-48352581	LNCaP	prostate:	n/a
26	chr7:48319696-48319746	HPAEpiC	pulmonary alveolar:	n/a
27	chr7:48351495-48351545	IMR90	lung:	fetal
28	chr7:48319696-48319746	RPTEC	kidney:	n/a
29	chr7:48351495-48351545	HCF	heart:	n/a
30	chr7:48352531-48352581	HRPEpiC	eye:	n/a
31	chr7:48319696-48319746	AG09309	skin:	n/a
32	chr7:48351495-48351545	GM12878	blood:	n/a
33	chr7:48352531-48352581	PrEC	prostate:	n/a
34	chr7:48351895-48351945	HNPCEpiC	eye:	n/a
35	chr7:48351495-48351545	BJ	skin:	n/a
36	chr7:48352531-48352581	HCF	heart:	n/a
37	chr7:48319696-48319746	GM12878	blood:	n/a
38	chr7:48352531-48352581	AG09319	gingival:	n/a
39	chr7:48352531-48352581	PANC-1	pancreas:	n/a
40	chr7:48351495-48351545	HCT-116	colon:	n/a
41	chr7:48351895-48351945	GM12892	blood:	n/a
42	chr7:48352531-48352581	SK-N-MC	brain:	n/a
43	chr7:48319696-48319746	HAEpiC	amniotic membrane:	n/a
44	chr7:48319696-48319746	NB4	blood:	n/a
45	chr7:48319696-48319746	NH-A	brain:	n/a
46	chr7:48319696-48319746	MCF-7	breast:	n/a
47	chr7:48351495-48351545	AoSMC	blood vessel:	n/a
48	chr7:48351895-48351945	LNCaP	prostate:	n/a
49	chr7:48351495-48351545	AG09319	gingival:	n/a
50	chr7:48319696-48319746	BE2_C	brain:	n/a

(count:7 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr7:48376419..48377077-chr7:49891980..49892898,2	MCF-7	breast:
2	chr7:48338977..48339698-chr7:48914621..48915709,3	MCF-7	breast:
3	chr7:48376280..48377237-chrX:150918854..150919433,2	MCF-7	breast:
4	chr7:48339292..48339820-chr7:49892008..49892873,2	MCF-7	breast:
5	chr7:48375884..48377251-chr7:48914594..48915844,5	MCF-7	breast:
6	chr7:48350873..48351428-chr7:48826215..48827185,2	MCF-7	breast:
7	chr7:48339343..48339865-chr7:49892019..49892834,2	K562	blood:

No data

Variant related genes	Relation type
ABCA13	TF binding region
ABCA13	CpG island

Extended variants
information (count: 4586 )
Associated
traits (count: 124 )

Variant overlapped rSNPs/rCNVs (count:4586 , 50 per page) page: 1 2 3 4 5 6 7 ... 92

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs2049513	chr7:48293104-48293105	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
2	rs370546051	chr7:48293187-48293188	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs532449449	chr7:48293277-48293278	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs376674223	chr7:48293278-48293279	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs192733996	chr7:48293323-48293324	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs565475456	chr7:48293343-48293344	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs368936280	chr7:48293388-48293389	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs561708039	chr7:48293408-48293409	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs139147446	chr7:48293450-48293451	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs528929485	chr7:48293463-48293464	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs200891199	chr7:48293470-48293471	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs184280526	chr7:48293488-48293489	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs201562067	chr7:48293494-48293495	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs79050647	chr7:48293503-48293504	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs75948699	chr7:48293504-48293505	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs62449183	chr7:48293511-48293512	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs79855067	chr7:48293523-48293524	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs112121989	chr7:48293524-48293525	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs571082696	chr7:48293550-48293551	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs538719771	chr7:48293609-48293610	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs144020312	chr7:48293749-48293750	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs572111636	chr7:48293778-48293779	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs540632227	chr7:48293822-48293823	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs572129782	chr7:48293829-48293830	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs554593304	chr7:48293832-48293833	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs533061284	chr7:48293848-48293849	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs113999790	chr7:48293851-48293852	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs113751869	chr7:48293881-48293882	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs11984356	chr7:48293882-48293883	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
30	rs377512727	chr7:48293918-48293919	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs145966741	chr7:48293937-48293938	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
32	rs75920228	chr7:48293956-48293957	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
33	rs546719382	chr7:48294034-48294035	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs139890271	chr7:48294058-48294059	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs143140062	chr7:48294059-48294060	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs548281117	chr7:48294089-48294090	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs568511377	chr7:48294110-48294111	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs531206000	chr7:48294122-48294123	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs79015623	chr7:48294130-48294131	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs145478621	chr7:48294138-48294139	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs539601450	chr7:48294141-48294142	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
42	rs74764970	chr7:48294188-48294189	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
43	rs577223139	chr7:48294193-48294194	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
44	rs57822219	chr7:48294195-48294196	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs566153000	chr7:48294254-48294255	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs534765900	chr7:48294279-48294280	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs149209473	chr7:48294283-48294284	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs574131223	chr7:48294287-48294288	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs73341739	chr7:48294329-48294330	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
50	rs372102786	chr7:48294364-48294365	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:124)

Disease	PMID	Source
Glioblastoma multiforme	17387387	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Biliary cancer	19435499	CNVD
Wilms tumour	21544195	CNVD
Neuroblastoma	18923191	CNVD
Glioma	21971842	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Medulloblastoma	21979893	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
colon cancer	17210682	CNVD
Lung adenocarcinoma	21810691	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Colorectal cancer	19359472	CNVD
Hypothalamic hamartomas	18252217	CNVD
Human rectal carcinomas	16397240	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Medulloblastoma	18056178	CNVD
Basal cell lymphoma	17170743	CNVD
Ewing''s sarcoma	21437220	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Lung cancer	18438408	CNVD
lymphocytic leukemia	21291569	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cancer	21637783	CNVD
Squamous cell cancer	20885788	CNVD
Breast cancer	16397240	CNVD
Non-small cell lung cancer	21829676	CNVD
Glioblastoma multiforme	17002787	CNVD
Autism	22495311	CNVD
Glioblastoma multiforme	18628472	CNVD
Cancer	21183584	CNVD
Breast cancer	21785460	CNVD
Follicular lymphoma	20505157	CNVD
Williams-beuren syndrome	22470819	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	21364760	CNVD
Acute myeloid leukemia	21251322	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Multiple myeloma	16461302	CNVD
Glioblastoma multiforme	21750150	CNVD
Hepatocellular carcinoma	16750200	CNVD
Acute myeloid leukemia	17237825	CNVD
Gastric cancer	24379144	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Abnormal phenotypes	18644119	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Esophageal cancer	21851588	CNVD
Lung adenocarcinoma	17086460	CNVD
Lung cancer	17086460	CNVD
Non-small cell lung cancer	17643093	CNVD
Ovarian cancer	18182111	CNVD
Colorectal cancer	16272173	CNVD
Glioblastoma multiforme	17369134	CNVD
Barrett''s esophagus	18559552	CNVD
head and neck squamous cell carcinoma	16943533	CNVD
Anaplastic thyroid cancer	17079354	CNVD
Basal-like breast cancer	17875215	CNVD
Colorectal cancer	16882699	CNVD
Colorectal cancer	18794099	CNVD
Gastrointestinal stromal cancer	17643098	CNVD
Lung cancer	18381415	CNVD
Metastatic colorectal cancer	17664472	CNVD
Non-small cell lung cancer	19255323	CNVD
Non-small cell lung cancer	17673923	CNVD
Non-small cell lung cancer	17975165	CNVD
Non-small cell lung cancer	19622585	CNVD
Ovarian cancer	16607561	CNVD
Squamous cell cancer	19670535	CNVD
head and neck squamous cell carcinoma	16818711	CNVD
small cell lung cancer	18829487	CNVD
Breast cancer	17661082	CNVD
Adenocarcinoma	19260752	CNVD
Esophageal cancer	16575012	CNVD
Lung adenocarcinoma	19138956	CNVD
Lung adenocarcinoma	18379350	CNVD
Lung adenocarcinoma	18258923	CNVD
Lung cancer	19138956	CNVD
Lung cancer	18379350	CNVD
Lung cancer	18258923	CNVD
Non-small cell lung cancer	18304967	CNVD
Non-small cell lung cancer	19451690	CNVD
Non-small cell lung cancer	19260752	CNVD
Non-small cell lung cancer	17079354	CNVD
Non-small cell lung cancer	18559607	CNVD
Rectal cancer	19506820	CNVD
Triple-negative breast cancer	18950515	CNVD
head and neck squamous cell carcinoma	18813952	CNVD
Non-small cell lung cancer	17504988	CNVD
Non-small cell lung cancer	16943533	CNVD
Non-small cell lung cancer	18509184	CNVD
head and neck squamous cell carcinoma	17538160	CNVD
Colorectal cancer	19712476	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Lung cancer	19671679	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
small cell lung cancer	20016488	CNVD
Myelofibrosis	22110671	CNVD
Lissencephaly	21572526	CNVD
Breast cancer	17603634	CNVD
Acute myeloid leukemia	16864856	CNVD
Pancreatic cancer	17952125	CNVD
Colorectal cancer	21645411	CNVD
Breast cancer	22522925	CNVD
Autism	22495309	CNVD

Chromatin state (count:373 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:48289000-48295200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr7:48290400-48299000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
3	chr7:48290600-48294600	Weak transcription	NHEK	skin
4	chr7:48290800-48294200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr7:48290800-48299000	Weak transcription	HUES6 Cell Line	embryonic stem cell
6	chr7:48291000-48294200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
7	chr7:48291000-48294200	Weak transcription	Osteobl	bone
8	chr7:48291200-48294400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
9	chr7:48291800-48294200	Weak transcription	NH-A	brain
10	chr7:48292000-48294800	Enhancers	Primary neutrophils fromperipheralblood	blood
11	chr7:48292200-48293400	Enhancers	Fetal Heart	heart
12	chr7:48292200-48294200	Weak transcription	GM12878-XiMat	blood
13	chr7:48292200-48308600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
14	chr7:48292600-48293200	Enhancers	ES-I3 Cell Line	embryonic stem cell
15	chr7:48292600-48293200	Enhancers	HUES64 Cell Line	embryonic stem cell
16	chr7:48292600-48293400	Enhancers	HUES48 Cell Line	embryonic stem cell
17	chr7:48292800-48293200	Enhancers	H1 Cell Line	embryonic stem cell
18	chr7:48292800-48293200	Enhancers	HMEC	breast
19	chr7:48292800-48293400	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
20	chr7:48292800-48295000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
21	chr7:48293000-48294400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
22	chr7:48293200-48294400	Weak transcription	HMEC	breast
23	chr7:48293400-48298800	Weak transcription	HUES48 Cell Line	embryonic stem cell
24	chr7:48294200-48294600	Enhancers	Fetal Adrenal Gland	Adrenal Gland
25	chr7:48294200-48294600	Enhancers	NHDF-Ad	bronchial
26	chr7:48294200-48294800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
27	chr7:48294200-48295000	Enhancers	GM12878-XiMat	blood
28	chr7:48294200-48295000	Enhancers	NH-A	brain
29	chr7:48294200-48295000	Enhancers	Osteobl	bone
30	chr7:48294400-48294600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
31	chr7:48294400-48294800	Enhancers	iPS-20b Cell Line	embryonic stem cell
32	chr7:48294400-48295000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
33	chr7:48294400-48295000	Enhancers	HMEC	breast
34	chr7:48294600-48294800	Enhancers	NHEK	skin
35	chr7:48294800-48295200	Genic enhancers	Primary neutrophils fromperipheralblood	blood
36	chr7:48294800-48299000	Weak transcription	iPS-20b Cell Line	embryonic stem cell
37	chr7:48295200-48296400	Weak transcription	Primary neutrophils fromperipheralblood	blood
38	chr7:48295200-48298600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
39	chr7:48296400-48297800	Strong transcription	Primary neutrophils fromperipheralblood	blood
40	chr7:48296600-48308800	Weak transcription	Primary hematopoietic stem cells	blood
41	chr7:48297800-48299600	Weak transcription	Primary neutrophils fromperipheralblood	blood
42	chr7:48298600-48301000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
43	chr7:48298800-48299400	Enhancers	HUES64 Cell Line	embryonic stem cell
44	chr7:48298800-48299600	Enhancers	HUES48 Cell Line	embryonic stem cell
45	chr7:48299000-48299200	Enhancers	iPS-15b Cell Line	embryonic stem cell
46	chr7:48299000-48299200	Enhancers	iPS-20b Cell Line	embryonic stem cell
47	chr7:48299000-48299400	Enhancers	ES-I3 Cell Line	embryonic stem cell
48	chr7:48299000-48299800	Enhancers	HUES6 Cell Line	embryonic stem cell
49	chr7:48299200-48299600	Enhancers	iPS-18 Cell Line	embryonic stem cell
50	chr7:48299200-48299800	Weak transcription	iPS-15b Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links