Variant report

Variant	nsv1032727
Chromosome Location	chr6:1900622-2064690
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1057)
CpG islands
(count:794)
Chromatin interactive
region (count:55)
LncRNA
region (count:95)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1057 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:2017245-2017425	HepG2	liver:	n/a	n/a
2	ARID3A	chr6:1982164-1982168	HepG2	liver:	n/a	n/a
3	ARID3A	chr6:2054021-2054064	HepG2	liver:	n/a	n/a
4	ATF1	chr6:2063914-2064084	K562	blood:	n/a	n/a
5	ATF1	chr6:1901867-1902183	K562	blood:	n/a	n/a
6	BATF	chr6:1927285-1927683	GM12878	blood:	n/a	n/a
7	BCL3	chr6:1942004-1942404	GM12878	blood:	n/a	chr6:1942039-1942047
8	BHLHE40	chr6:2048167-2048485	HepG2	liver:	n/a	n/a
9	BHLHE40	chr6:1940816-1940864	GM12878	blood:	n/a	n/a
10	BHLHE40	chr6:1904199-1904406	K562	blood:	n/a	chr6:1904318-1904327 chr6:1904318-1904327
11	BRCA1	chr6:1952824-1953560	Hela-S3	cervix:	n/a	n/a
12	BRCA1	chr6:2026378-2026420	Hela-S3	cervix:	n/a	n/a
13	CBX3	chr6:1952791-1953456	HCT-116	colon:	n/a	n/a
14	CEBPB	chr6:1917901-1918386	Hela-S3	cervix:	n/a	n/a
15	CEBPB	chr6:2048102-2048427	IMR90	lung:	n/a	chr6:2048259-2048270
16	CEBPB	chr6:2017285-2017512	HepG2	liver:	n/a	n/a
17	CEBPB	chr6:2034532-2034911	IMR90	lung:	n/a	n/a
18	CEBPB	chr6:1940554-1941012	ECC-1	luminal epithelium:	n/a	n/a
19	CEBPB	chr6:1973311-1973530	K562	blood:	n/a	chr6:1973400-1973411 chr6:1973350-1973361
20	CEBPB	chr6:2033285-2033574	HepG2	liver:	n/a	chr6:2033416-2033429 chr6:2033416-2033427 chr6:2033418-2033429
21	CEBPB	chr6:1944919-1945247	HepG2	liver:	n/a	chr6:1945071-1945082 chr6:1945072-1945083
22	CEBPB	chr6:1973240-1973440	H1-hESC	embryonic stem cell:	n/a	chr6:1973400-1973411 chr6:1973350-1973361
23	CEBPB	chr6:2034543-2034870	A549	lung:	n/a	n/a
24	CEBPB	chr6:1973267-1973496	A549	lung:	n/a	chr6:1973400-1973411 chr6:1973350-1973361
25	CEBPB	chr6:2033311-2033582	IMR90	lung:	n/a	chr6:2033416-2033429 chr6:2033416-2033427 chr6:2033418-2033429
26	CEBPB	chr6:1911798-1912049	IMR90	lung:	n/a	n/a
27	CEBPB	chr6:2021876-2022339	ECC-1	luminal epithelium:	n/a	chr6:2022120-2022131 chr6:2022119-2022132
28	CEBPB	chr6:2022025-2022256	HepG2	liver:	n/a	chr6:2022120-2022131 chr6:2022119-2022132
29	CEBPB	chr6:1949983-1950175	A549	lung:	n/a	chr6:1950099-1950110
30	CEBPB	chr6:2033343-2033501	K562	blood:	n/a	chr6:2033416-2033429 chr6:2033416-2033427 chr6:2033418-2033429
31	CEBPB	chr6:1929694-1929943	A549	lung:	n/a	chr6:1929769-1929780
32	CEBPB	chr6:2055021-2055222	HepG2	liver:	n/a	n/a
33	CEBPB	chr6:1944940-1945213	A549	lung:	n/a	chr6:1945071-1945082 chr6:1945072-1945083
34	CEBPB	chr6:1973230-1973567	Hela-S3	cervix:	n/a	chr6:1973400-1973411 chr6:1973350-1973361
35	CEBPB	chr6:1949462-1950279	Hela-S3	cervix:	n/a	chr6:1949680-1949693 chr6:1949677-1949694 chr6:1950099-1950110 chr6:1950261-1950272
36	CEBPB	chr6:2044762-2044922	HepG2	liver:	n/a	chr6:2044864-2044875
37	CEBPB	chr6:1944912-1945241	IMR90	lung:	n/a	chr6:1945071-1945082 chr6:1945072-1945083
38	CEBPB	chr6:1945540-1945684	HepG2	liver:	n/a	n/a
39	CEBPB	chr6:1901869-1902242	IMR90	lung:	n/a	n/a
40	CEBPB	chr6:1952816-1953439	IMR90	lung:	n/a	n/a
41	CEBPB	chr6:1952949-1953457	Hela-S3	cervix:	n/a	n/a
42	CEBPB	chr6:2007464-2007757	HepG2	liver:	n/a	chr6:2007578-2007589 chr6:2007623-2007634
43	CEBPB	chr6:1945812-1946020	H1-hESC	embryonic stem cell:	n/a	n/a
44	CEBPB	chr6:2007503-2007723	IMR90	lung:	n/a	chr6:2007578-2007589 chr6:2007623-2007634
45	CEBPB	chr6:1923869-1924069	HepG2	liver:	n/a	chr6:1923977-1923988
46	CEBPB	chr6:1993383-1993750	IMR90	lung:	n/a	n/a
47	CEBPB	chr6:1929661-1929962	IMR90	lung:	n/a	chr6:1929769-1929780
48	CEBPB	chr6:1949811-1950265	IMR90	lung:	n/a	chr6:1950099-1950110
49	CEBPB	chr6:2054026-2054178	HepG2	liver:	n/a	chr6:2054100-2054111 chr6:2054099-2054110 chr6:2054099-2054110
50	CEBPB	chr6:2029420-2029800	Hela-S3	cervix:	n/a	n/a

(count:794 , 50 per page) page: 1 2 3 4 5 6 7 ... 16

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:1917931-1917981	HepG2	liver:	n/a
2	chr6:1917931-1917981	HepG2	liver:	n/a
3	chr6:2063957-2064007	K562	blood:	n/a
4	chr6:1930446-1930496	HIPEpiC	eye:	n/a
5	chr6:1987269-1987319	HMEC	breast:	n/a
6	chr6:1909853-1909903	HRPEpiC	eye:	n/a
7	chr6:1994056-1994106	RPTEC	kidney:	n/a
8	chr6:2021942-2021992	HPAEpiC	pulmonary alveolar:	n/a
9	chr6:1953086-1953136	HNPCEpiC	eye:	n/a
10	chr6:2030637-2030687	PFSK-1	brain:	n/a
11	chr6:1970710-1970760	AG09309	skin:	n/a
12	chr6:2063957-2064007	AG04450	lung:	fetal
13	chr6:2063957-2064007	LNCaP	prostate:	n/a
14	chr6:1987269-1987319	SK-N-SH_RA	brain:	n/a
15	chr6:1987269-1987319	NH-A	brain:	n/a
16	chr6:1901298-1901348	HEEpiC	esophagus:	n/a
17	chr6:1953086-1953136	BJ	skin:	n/a
18	chr6:2030637-2030687	GM12892	blood:	n/a
19	chr6:1994056-1994106	LNCaP	prostate:	n/a
20	chr6:1909853-1909903	HRCEpiC	kidney:	n/a
21	chr6:1901298-1901348	HIPEpiC	eye:	n/a
22	chr6:1917931-1917981	A549	lung:	n/a
23	chr6:1901423-1901473	PrEC	prostate:	n/a
24	chr6:1930446-1930496	HRCEpiC	kidney:	n/a
25	chr6:2063957-2064007	ECC-1	luminal epithelium:	n/a
26	chr6:1930446-1930496	BE2_C	brain:	n/a
27	chr6:1917931-1917981	NH-A	brain:	n/a
28	chr6:1909853-1909903	HEK293	kidney:	embryo
29	chr6:2021942-2021992	HMEC	breast:	n/a
30	chr6:1970710-1970760	NT2-D1	testis:	n/a
31	chr6:2001134-2001184	Caco-2	colon:	n/a
32	chr6:1901423-1901473	PANC-1	pancreas:	n/a
33	chr6:1901298-1901348	SAEC	small airway:	n/a
34	chr6:1901298-1901348	HPAEpiC	pulmonary alveolar:	n/a
35	chr6:1994056-1994106	HEEpiC	esophagus:	n/a
36	chr6:2030637-2030687	MCF-7	breast:	n/a
37	chr6:1970710-1970760	PFSK-1	brain:	n/a
38	chr6:2001134-2001184	BE2_C	brain:	n/a
39	chr6:1970710-1970760	GM06990	blood:	n/a
40	chr6:1909853-1909903	U87	brain:	n/a
41	chr6:1987269-1987319	HRCEpiC	kidney:	n/a
42	chr6:1970710-1970760	GM12891	blood:	n/a
43	chr6:2001134-2001184	GM19239	blood:	n/a
44	chr6:1909853-1909903	K562	blood:	n/a
45	chr6:2063957-2064007	AoSMC	blood vessel:	n/a
46	chr6:2021942-2021992	HL-60	blood:	n/a
47	chr6:2021942-2021992	Caco-2	colon:	n/a
48	chr6:1930446-1930496	ProgFib	skin:	n/a
49	chr6:2001134-2001184	NB4	blood:	n/a
50	chr6:1994056-1994106	HAEpiC	amniotic membrane:	n/a

(count:55 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr6:1992439..1995123-chr6:2017322..2020251,2	MCF-7	breast:
2	chr6:2034659..2036744-chr6:2038441..2040012,2	K562	blood:
3	chr6:1995618..1998504-chr6:2001883..2003856,2	MCF-7	breast:
4	chr6:1604389..1605339-chr6:2037539..2038714,6	MCF-7	breast:
5	chr6:1892981..1894808-chr6:1898634..1901101,2	K562	blood:
6	chr6:2053179..2055343-chr6:2055921..2058664,2	K562	blood:
7	chr6:1964049..1966917-chr6:1973161..1976024,2	MCF-7	breast:
8	chr6:1909308..1911195-chr6:1919277..1921722,2	K562	blood:
9	chr6:1961516..1963757-chr6:1966305..1967942,2	MCF-7	breast:
10	chr6:2040794..2041414-chr6:2132566..2133423,2	MCF-7	breast:
11	chr6:1909308..1911195-chr6:1919277..1921722,2	K562	blood:
12	chr6:1993624..1996051-chr6:2001806..2003962,2	MCF-7	breast:
13	chr6:1597053..1598701-chr6:2028381..2030962,2	MCF-7	breast:
14	chr6:1993624..1996051-chr6:2001806..2003962,2	MCF-7	breast:
15	chr6:1901619..1903388-chr6:1908460..1910593,2	MCF-7	breast:
16	chr6:2053179..2055343-chr6:2055921..2058664,2	K562	blood:
17	chr6:1940855..1943499-chr6:1944442..1946843,2	MCF-7	breast:
18	chr6:1641339..1642209-chr6:2040485..2041381,10	MCF-7	breast:
19	chr6:1687705..1689318-chr6:1909899..1912443,2	K562	blood:
20	chr6:1940855..1943499-chr6:1944442..1946843,2	MCF-7	breast:
21	chr6:2005493..2008020-chr6:2019551..2022122,2	K562	blood:
22	chr6:1641666..1642175-chr6:1997946..1998735,2	MCF-7	breast:
23	chr6:1996917..1999046-chr6:2003121..2005556,2	MCF-7	breast:
24	chr6:1901619..1903388-chr6:1908460..1910593,2	MCF-7	breast:
25	chr6:1918511..1920955-chr6:1921418..1923384,2	K562	blood:
26	chr6:1941619..1944152-chr6:2244261..2246273,2	MCF-7	breast:
27	chr6:1609442..1611153-chr6:2038341..2040817,2	MCF-7	breast:
28	chr6:1608996..1611183-chr6:1948987..1951585,2	MCF-7	breast:
29	chr6:1608425..1611671-chr6:2030333..2034108,4	MCF-7	breast:
30	chr6:2009784..2011598-chr6:2035176..2037362,2	MCF-7	breast:
31	chr6:2034659..2036744-chr6:2038441..2040012,2	K562	blood:
32	chr6:1948965..1951899-chr6:1951907..1953697,2	MCF-7	breast:
33	chr6:1996917..1999046-chr6:2003121..2005556,2	MCF-7	breast:
34	chr6:2005493..2008020-chr6:2019551..2022122,2	K562	blood:
35	chr6:1609450..1612431-chr6:1929248..1931252,2	MCF-7	breast:
36	chr6:1610286..1612830-chr6:2028603..2030738,2	MCF-7	breast:
37	chr6:1918511..1920955-chr6:1921418..1923384,2	K562	blood:
38	chr6:1961516..1963757-chr6:1966305..1967942,2	MCF-7	breast:
39	chr6:1995618..1998504-chr6:2001883..2003856,2	MCF-7	breast:
40	chr6:1608029..1610545-chr6:1915416..1919377,4	MCF-7	breast:
41	chr6:1948965..1951899-chr6:1951907..1953697,2	MCF-7	breast:
42	chr6:2040678..2043654-chr6:2103622..2106281,2	MCF-7	breast:
43	chr6:1604328..1605242-chr6:2035866..2036724,2	MCF-7	breast:
44	chr6:1964426..1965970-chr6:1968700..1971465,2	K562	blood:
45	chr6:2030064..2032046-chr6:2035936..2037834,2	K562	blood:
46	chr6:1992439..1995123-chr6:2017322..2020251,2	MCF-7	breast:
47	chr6:1641287..1642175-chr6:1997946..1998735,3	MCF-7	breast:
48	chr6:2009784..2011598-chr6:2035176..2037362,2	MCF-7	breast:
49	chr6:1609057..1611446-chr6:2026298..2028309,2	MCF-7	breast:
50	chr6:1641104..1642209-chr6:2040485..2041851,20	MCF-7	breast:

(count:95 , 50 per page) page: 1 2

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C6orf195-33	chr6:1931750-1931983	NONHSAT106563
2	lnc-FOXC1-10	chr6:1961916-1962670	NONHSAT106568
3	lnc-C6orf195-25	chr6:1986914-1987147	NONHSAT106582
4	lnc-FOXC1-11	chr6:1977665-1977778	NONHSAT106574
5	lnc-C6orf195-26	chr6:1979260-1979473	NONHSAT106577
6	lnc-FOXC1-9	chr6:1904182-1904425	NONHSAT106556
7	lnc-FOXC1-11	chr6:1991811-1991882	NONHSAT106576
8	lnc-FOXC1-11	chr6:1976469-1976625	NONHSAT106574
9	lnc-C6orf195-23	chr6:2020703-2020936	NONHSAT106586
10	lnc-FOXC1-9	chr6:1902860-1902931	NONHSAT106552
11	lnc-FOXC1-10	chr6:1958025-1958096	NONHSAT106568
12	lnc-FOXC1-11	chr6:1992403-1994306	NONHSAT106575
13	lnc-FOXC1-11	chr6:1977962-1978063	NONHSAT106574
14	lnc-FOXC1-9	chr6:1906751-1907505	NONHSAT106554
15	lnc-FOXC1-11	chr6:1977093-1977153	NONHSAT106576
16	lnc-FOXC1-11	chr6:1991811-1991882	NONHSAT106575
17	lnc-C6orf195-27	chr6:1972717-1973057	NONHSAT106573
18	lnc-FOXC1-9	chr6:1907309-1907388	NONHSAT106557
19	lnc-FOXC1-11	chr6:1977962-1978063	NONHSAT106575
20	lnc-FOXC1-10	chr6:1928385-1928486	NONHSAT106561
21	lnc-FOXC1-9	chr6:1903590-1903661	NONHSAT106556
22	lnc-FOXC1-10	chr6:1940434-1940479	NONHSAT106561
23	lnc-FOXC1-9	chr6:1901061-1901106	NONHSAT106552
24	lnc-FOXC1-9	chr6:1904943-1906085	NONHSAT106556
25	lnc-FOXC1-10	chr6:1961744-1961823	NONHSAT106568
26	lnc-FOXC1-11	chr6:1977962-1978063	NONHSAT106576
27	lnc-FOXC1-10	chr6:1943881-1943994	NONHSAT106568
28	lnc-FOXC1-9	chr6:1907481-1908235	NONHSAT106557
29	lnc-FOXC1-9	chr6:1901791-1901836	NONHSAT106556
30	lnc-FOXC1-9	chr6:1901061-1901106	NONHSAT106553
31	lnc-C6orf195-29	chr6:1952058-1952398	NONHSAT106571
32	lnc-FOXC1-10	chr6:1926892-1927048	NONHSAT106561
33	lnc-C6orf195-28	chr6:1967473-1967962	NONHSAT106572
34	lnc-FOXC1-11	chr6:1993164-1994306	NONHSAT106576
35	lnc-FOXC1-11	chr6:1977093-1977153	NONHSAT106575
36	lnc-FOXC1-11	chr6:1990168-1990236	NONHSAT106574
37	lnc-FOXC1-9	chr6:1904213-1905355	NONHSAT106552
38	lnc-C6orf195-23	chr6:2022298-2022638	NONHSAT106586
39	lnc-C6orf195-30	chr6:1949489-1949978	NONHSAT106570
40	lnc-FOXC1-10	chr6:1927692-1927783	NONHSAT106561
41	lnc-FOXC1-10	chr6:1940592-1940660	NONHSAT106561
42	lnc-FOXC1-11	chr6:1977269-1977360	NONHSAT106576
43	lnc-FOXC1-9	chr6:1901791-1901836	NONHSAT106557
44	lnc-C6orf195-29	chr6:1950463-1950696	NONHSAT106571
45	lnc-FOXC1-10	chr6:1956384-1956452	NONHSAT106568
46	lnc-FOXC1-10	chr6:1943309-1943369	NONHSAT106568
47	lnc-C6orf195-31	chr6:1948760-1949249	NONHSAT106569
48	lnc-FOXC1-11	chr6:1976469-1976625	NONHSAT106575
49	lnc-FOXC1-10	chr6:1942685-1942841	NONHSAT106568
50	lnc-FOXC1-11	chr6:1976469-1976625	NONHSAT106576

No data

Variant related genes	Relation type
GMDS	TF binding region
GMDS	CpG island
ENSG00000112699	chromatin interactions
ENSG00000054598	chromatin interactions
ENSG00000250903	chromatin interactions

Extended variants
information (count: 6431 )
Associated
traits (count: 76 )

Variant overlapped rSNPs/rCNVs (count:6431 , 50 per page) page: 1 2 3 4 5 6 7 ... 129

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs373358616	chr6:1900636-1900637	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs527827414	chr6:1900663-1900664	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs112526033	chr6:1900664-1900665	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs373180765	chr6:1900666-1900667	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs547574631	chr6:1900692-1900693	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs9328075	chr6:1900696-1900697	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs150120754	chr6:1900711-1900712	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs533160949	chr6:1900745-1900746	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs549730626	chr6:1900765-1900766	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs138934596	chr6:1900766-1900767	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs537701735	chr6:1900816-1900817	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs185067654	chr6:1900823-1900824	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs113947152	chr6:1900834-1900835	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs533934127	chr6:1900859-1900860	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs75471895	chr6:1900866-1900867	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs73425506	chr6:1900893-1900894	Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs541129602	chr6:1900978-1900979	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs189875763	chr6:1900979-1900980	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs575537682	chr6:1900983-1900984	Weak transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs576810647	chr6:1901018-1901019	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs181146082	chr6:1901071-1901072	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
22	rs562317330	chr6:1901083-1901084	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
23	rs34178745	chr6:1901103-1901104	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
24	rs527861670	chr6:1901124-1901125	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs79383220	chr6:1901143-1901144	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
26	rs564439282	chr6:1901144-1901145	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
27	rs185588196	chr6:1901161-1901162	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
28	rs549767876	chr6:1901167-1901168	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
29	rs569675207	chr6:1901212-1901213	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
30	rs145892742	chr6:1901214-1901215	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
31	rs548075097	chr6:1901226-1901227	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
32	rs1570533	chr6:1901247-1901248	Weak transcription Enhancers	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
33	rs557738739	chr6:1901256-1901257	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
34	rs533732628	chr6:1901260-1901261	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
35	rs553894411	chr6:1901280-1901281	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
36	rs570473512	chr6:1901286-1901287	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
37	rs539491540	chr6:1901291-1901292	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs138497631	chr6:1901299-1901300	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs116129586	chr6:1901386-1901387	Weak transcription Enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs3778546	chr6:1901387-1901388	Weak transcription Enhancers	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs555772212	chr6:1901424-1901425	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs540402594	chr6:1901434-1901435	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs191479806	chr6:1901445-1901446	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs560525995	chr6:1901479-1901480	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs183253999	chr6:1901488-1901489	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs564656785	chr6:1901491-1901492	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs1570534	chr6:1901495-1901496	Enhancers Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs543503543	chr6:1901502-1901503	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs77936549	chr6:1901549-1901550	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs529227659	chr6:1901562-1901563	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:76)

Disease	PMID	Source
Chronic lymphocytic leukemia	21546498	CNVD
Myelofibrosis	22110671	CNVD
Barrett''s adenocarcinoma	18663352	CNVD
Prader-willi syndrome	20588305	CNVD
Multiple myeloma	16616336	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Developmental delay	19490664	CNVD
Cancer	21183584	CNVD
Multiple Epiphyseal Dysplasia	20877625	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Glaucoma	18694899	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Prostate cancer	16573809	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Breast cancer	17603634	CNVD
Cancer	20164920	CNVD
Colorectal cancer	21297112	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Follicular lymphoma	20505157	CNVD
Glioblastoma multiforme	21080181	CNVD
Ewing''s sarcoma	21437220	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
Acute myeloid leukemia	20729466	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Myelodysplastic syndrome	21251322	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21364760	CNVD
Lung cancer	18438408	CNVD
Bladder cancer	21909424	CNVD
Multiple myeloma	17550852	CNVD
Ewing''s sarcoma	17952124	CNVD
Cancer	20164919	CNVD
Gastric cancer	16891809	CNVD
Ovarian cancer	21781307	CNVD
small cell lung cancer	20016488	CNVD
Autism	22495311	CNVD
Autism	21448237	CNVD
Lung adenocarcinoma	21935476	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD
Non-small cell lung cancer	16651412	CNVD
Tetralogy of Fallot	22912587	CNVD
early-passage human iPS cells	21368824	CNVD
Gastric cancer	22315472	CNVD
Schizophrenia	23813976	CNVD

Chromatin state (count:1542 , 50 per page) page: 1 2 3 4 5 6 7 ... 31

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:1851400-1909600	Weak transcription	Rectal Mucosa Donor 31	rectum
2	chr6:1877600-1915200	Weak transcription	Primary T cells from cord blood	blood
3	chr6:1886200-1901400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr6:1886200-1904000	Weak transcription	Fetal Intestine Small	intestine
5	chr6:1890600-1904000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
6	chr6:1890600-1911400	Weak transcription	Primary hematopoietic stem cells	blood
7	chr6:1891800-1914800	Weak transcription	Colonic Mucosa	Colon
8	chr6:1894200-1904000	Weak transcription	Pancreas	Pancrea
9	chr6:1895800-1904000	Weak transcription	Fetal Muscle Leg	muscle
10	chr6:1895800-1910800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr6:1895800-1911200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr6:1896000-1916400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
13	chr6:1896200-1901400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
14	chr6:1896400-1901200	Weak transcription	Rectal Mucosa Donor 29	rectum
15	chr6:1896400-1910800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
16	chr6:1896600-1901400	Weak transcription	Aorta	Aorta
17	chr6:1896600-1901800	Weak transcription	Osteobl	bone
18	chr6:1896600-1904800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr6:1896600-1905000	Weak transcription	Duodenum Mucosa	Duodenum
20	chr6:1897200-1916200	Weak transcription	Thymus	Thymus
21	chr6:1897400-1915000	Weak transcription	Esophagus	oesophagus
22	chr6:1897400-1915000	Weak transcription	Sigmoid Colon	Sigmoid Colon
23	chr6:1897600-1904400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
24	chr6:1898200-1905000	Weak transcription	HepG2	liver
25	chr6:1898600-1914800	Weak transcription	Gastric	stomach
26	chr6:1899800-1904000	Weak transcription	Ovary	ovary
27	chr6:1900200-1902000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr6:1900200-1904000	Weak transcription	Right Atrium	heart
29	chr6:1900400-1903400	Weak transcription	Fetal Kidney	kidney
30	chr6:1900600-1901000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
31	chr6:1901000-1902400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
32	chr6:1901200-1901600	Enhancers	Rectal Mucosa Donor 29	rectum
33	chr6:1901200-1902200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
34	chr6:1901200-1902400	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
35	chr6:1901400-1901600	Enhancers	Aorta	Aorta
36	chr6:1901400-1902200	Enhancers	ES-I3 Cell Line	embryonic stem cell
37	chr6:1901400-1902400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
38	chr6:1901400-1902600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
39	chr6:1901600-1901800	Enhancers	Cortex derived primary cultured neurospheres	brain
40	chr6:1901600-1902000	Weak transcription	Aorta	Aorta
41	chr6:1901600-1902200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
42	chr6:1901600-1902400	Enhancers	HUES6 Cell Line	embryonic stem cell
43	chr6:1901600-1923400	Weak transcription	Rectal Mucosa Donor 29	rectum
44	chr6:1901800-1902200	Enhancers	Placenta Amnion	Placenta Amnion
45	chr6:1901800-1902400	Enhancers	Osteobl	bone
46	chr6:1902000-1902200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
47	chr6:1902000-1902200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
48	chr6:1902000-1902200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
49	chr6:1902000-1902200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
50	chr6:1902000-1902200	Enhancers	Aorta	Aorta

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