Variant report

Variant	nsv1033733
Chromosome Location	chr6:81641291-81728782
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:12)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:12 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:81656912..81658569-chr6:81659055..81661671,2	K562	blood:
2	chr6:81656912..81658569-chr6:81659055..81661671,2	K562	blood:
3	chr6:81713030..81715719-chr6:81717371..81719570,2	MCF-7	breast:
4	chr6:81681010..81683016-chr6:81684816..81687356,2	MCF-7	breast:
5	chr6:81681010..81683016-chr6:81684816..81687356,2	MCF-7	breast:
6	chr6:81656427..81658412-chr6:81659055..81660957,2	K562	blood:
7	chr6:81656427..81658412-chr6:81659055..81660957,2	K562	blood:
8	chr6:81654232..81656742-chr6:81662594..81664645,2	K562	blood:
9	chr6:81654232..81656742-chr6:81662594..81664645,2	K562	blood:
10	chr6:81713030..81715719-chr6:81717371..81719570,2	MCF-7	breast:
11	chr6:81639861..81642496-chr6:81657768..81659488,2	K562	blood:
12	chr6:81639861..81642496-chr6:81657768..81659488,2	K562	blood:

No data

Extended variants
information (count: 1764 )
Associated
traits (count: 106 )

Variant overlapped rSNPs/rCNVs (count:1764 , 50 per page) page: 1 2 3 4 5 6 7 ... 36

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs534391647	chr6:81642832-81642833	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs372692851	chr6:81642849-81642850	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs551197153	chr6:81642865-81642866	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs375965713	chr6:81642894-81642895	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs571076145	chr6:81642897-81642898	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs536969485	chr6:81642906-81642907	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs557176255	chr6:81642908-81642909	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs576370724	chr6:81642924-81642925	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs143525800	chr6:81642929-81642930	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs555797875	chr6:81642965-81642966	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs185495985	chr6:81642969-81642970	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs9361685	chr6:81642984-81642985	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs147159620	chr6:81643006-81643007	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs536346787	chr6:81643011-81643012	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs578087311	chr6:81643048-81643049	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs529817166	chr6:81643050-81643051	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs531477152	chr6:81643059-81643060	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs61303366	chr6:81643091-81643092	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs564049158	chr6:81643099-81643100	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs529556644	chr6:81643123-81643124	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs140939072	chr6:81643213-81643214	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs190973926	chr6:81643231-81643232	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs558907899	chr6:81643286-81643287	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs181821453	chr6:81643288-81643289	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs4098343	chr6:81643296-81643297	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs554722768	chr6:81643326-81643327	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs573032322	chr6:81643389-81643390	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs386703134	chr6:81643394-81643395	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs200153631	chr6:81643395-81643396	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs550495994	chr6:81643407-81643408	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs151295390	chr6:81643414-81643415	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs558839952	chr6:81643431-81643432	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs555810039	chr6:81643435-81643436	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs112353238	chr6:81643451-81643452	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs183720307	chr6:81643467-81643468	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs552759091	chr6:81643534-81643535	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs494686	chr6:81643543-81643544	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
38	rs4092464	chr6:81643583-81643584	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs555082076	chr6:81643677-81643678	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs544023301	chr6:81643678-81643679	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs495719	chr6:81643684-81643685	ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs376595335	chr6:81643689-81643690	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs150059347	chr6:81643746-81643747	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs542872472	chr6:81643780-81643781	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs77791964	chr6:81643789-81643790	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
46	rs558925975	chr6:81643802-81643803	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
47	rs539900958	chr6:81643891-81643892	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
48	rs145200019	chr6:81643912-81643913	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
49	rs564670440	chr6:81643948-81643949	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
50	rs530498141	chr6:81643953-81643954	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:106)

Disease	PMID	Source
Uveal melanoma	21693616	CNVD
Glioblastoma multiforme	21080181	CNVD
Biliary cancer	19435499	CNVD
Medulloblastoma	21979893	CNVD
Malaria	21533027	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Autism	22495311	CNVD
Gastric cancer	17908304	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	17603634	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Systemic lupus erythematosus	17503323	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Cancer	21637783	CNVD
Colorectal cancer	16272173	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
T-cell lymphomas	19863542	CNVD
lymphocytic leukemia	21291569	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Follicular lymphoma	19010834	CNVD
Non-small cell lung cancer	21044232	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Hepatocellular carcinoma	22174799	CNVD
Phyllodes tumor	17334353	CNVD
Breast cancer	16608533	CNVD
Non-small cell lung cancer	21385341	CNVD
Prostate cancer	16705090	CNVD
Adenoid cystic carcinoma	17372589	CNVD
Ependymoma	16718352	CNVD
High-proliferative meningiomas	17937814	CNVD
Intracranial tumor	16823260	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	16573809	CNVD
Breast cancer	16272173	CNVD
small cell lung cancer	20016488	CNVD
Prostate cancer	18632612	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Urothelial carcinoma	18382360	CNVD
Ovarian neoplasms	16753589	CNVD
Hepatocellular carcinoma	16750200	CNVD
Wilms tumour	21544195	CNVD
Acute lymphoblastic leukemia	21098271	CNVD
Follicular lymphoma	17699855	CNVD
Breast cancer	17133270	CNVD
Leukemia	18688285	CNVD
Prostate cancer	19242612	CNVD
Developmental delay	21147756	CNVD
Glioma	21046410	CNVD
Primary central nervous system lymphoma	21088137	CNVD
Zellweger syndrome	21572526	CNVD
Follicular lymphoma	20505157	CNVD
Congenital diaphragmatic hernia	21085971	CNVD
Malignant melanoma	18718029	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Lung adenocarcinoma	21935476	CNVD
Myelofibrosis	22110671	CNVD
Salivary gland tumor	18059337	CNVD
Lung cancer	16773561	CNVD
Glioblastoma multiforme	22286061	CNVD
Urothelial cell carcinoma	18451213	CNVD
Prostate cancer	16461572	CNVD
Mental retardation	21045960	CNVD
Obesity	21045960	CNVD
learning difficulties	21045960	CNVD
Prostate cancer	17245344	CNVD
High-grade prostatic intraepithelial neoplasia	16573809	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Cancer	20164920	CNVD
Burkitt''s lymphoma	20823134	CNVD
Ductal carcinoma	22052326	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
Acute lymphoblastic leukemia	17640729	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Tetralogy of Fallot	22912587	CNVD
Breast cancer	21364760	CNVD
Cancer	20164919	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD

Chromatin state (count:110 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:81642800-81644800	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr6:81644800-81645200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr6:81645200-81645600	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr6:81645600-81646400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr6:81646400-81648400	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr6:81646800-81647000	ZNF genes & repeats	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr6:81649000-81649600	Enhancers	Placenta Amnion	Placenta Amnion
8	chr6:81649000-81649600	Enhancers	NHLF	lung
9	chr6:81649000-81651600	Enhancers	Fetal Lung	lung
10	chr6:81649400-81650800	Enhancers	HSMMtube	muscle
11	chr6:81649600-81650600	Weak transcription	Placenta Amnion	Placenta Amnion
12	chr6:81649600-81650600	Weak transcription	NHLF	lung
13	chr6:81649600-81651400	Enhancers	Dnd41	blood
14	chr6:81649800-81651200	Enhancers	Rectal Smooth Muscle	rectum
15	chr6:81650000-81651200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr6:81650200-81650800	Enhancers	Colon Smooth Muscle	Colon
17	chr6:81650400-81651400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
18	chr6:81650600-81650800	Enhancers	Placenta Amnion	Placenta Amnion
19	chr6:81651000-81651200	Enhancers	NHLF	lung
20	chr6:81651400-81653800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
21	chr6:81653800-81654200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
22	chr6:81662000-81662800	Enhancers	Dnd41	blood
23	chr6:81662000-81663200	Enhancers	Fetal Intestine Large	intestine
24	chr6:81663200-81668800	Weak transcription	Fetal Intestine Large	intestine
25	chr6:81664400-81664600	Enhancers	Primary hematopoietic stem cells short term culture	blood
26	chr6:81664400-81665000	Enhancers	HUES64 Cell Line	embryonic stem cell
27	chr6:81664800-81665200	Enhancers	HUVEC	blood vessel
28	chr6:81664800-81666600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
29	chr6:81665200-81665600	Weak transcription	HUVEC	blood vessel
30	chr6:81665600-81667800	Enhancers	HUVEC	blood vessel
31	chr6:81666400-81667200	Enhancers	Fetal Heart	heart
32	chr6:81666600-81667000	Enhancers	Primary hematopoietic stem cells short term culture	blood
33	chr6:81667200-81672000	Weak transcription	Fetal Heart	heart
34	chr6:81667800-81669000	Weak transcription	HUVEC	blood vessel
35	chr6:81668800-81669600	Enhancers	Fetal Intestine Large	intestine
36	chr6:81669000-81669400	Enhancers	Duodenum Smooth Muscle	Duodenum
37	chr6:81669000-81669600	Enhancers	HUVEC	blood vessel
38	chr6:81669000-81669800	Enhancers	Fetal Stomach	stomach
39	chr6:81669000-81670400	Enhancers	Colon Smooth Muscle	Colon
40	chr6:81669000-81670400	Enhancers	Rectal Smooth Muscle	rectum
41	chr6:81669400-81670800	Enhancers	Dnd41	blood
42	chr6:81669600-81672200	Weak transcription	Fetal Intestine Large	intestine
43	chr6:81670800-81676000	Weak transcription	Dnd41	blood
44	chr6:81672000-81672400	Enhancers	Fetal Heart	heart
45	chr6:81672000-81672600	Enhancers	HUES64 Cell Line	embryonic stem cell
46	chr6:81672200-81672600	Enhancers	iPS-18 Cell Line	embryonic stem cell
47	chr6:81672200-81672800	Enhancers	Fetal Intestine Large	intestine
48	chr6:81672600-81676200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
49	chr6:81672600-81677200	Weak transcription	HUES64 Cell Line	embryonic stem cell
50	chr6:81672800-81673600	Enhancers	HUES48 Cell Line	embryonic stem cell

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