Variant report

Variant	nsv1033738
Chromosome Location	chr7:48143988-48349357
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2046)
CpG islands
(count:550)
Chromatin interactive
region (count:33)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2046 , 50 per page) page: 1 2 3 4 5 6 7 ... 41

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr7:48183734-48184408	HepG2	liver:	n/a	n/a
2	ARID3A	chr7:48194351-48194742	HepG2	liver:	n/a	n/a
3	ARID3A	chr7:48179006-48179347	HepG2	liver:	n/a	n/a
4	ARID3A	chr7:48240766-48240966	K562	blood:	n/a	n/a
5	ARID3A	chr7:48149780-48150172	HepG2	liver:	n/a	n/a
6	ARID3A	chr7:48179554-48180339	HepG2	liver:	n/a	n/a
7	ATF2	chr7:48291310-48291832	GM12878	blood:	n/a	n/a
8	ATF2	chr7:48294644-48295012	GM12878	blood:	n/a	n/a
9	ATF2	chr7:48285619-48286161	GM12878	blood:	n/a	n/a
10	ATF2	chr7:48170213-48170724	GM12878	blood:	n/a	n/a
11	ATF2	chr7:48338313-48338712	GM12878	blood:	n/a	n/a
12	ATF2	chr7:48291293-48291808	GM12878	blood:	n/a	n/a
13	ATF2	chr7:48338249-48338768	GM12878	blood:	n/a	n/a
14	BACH1	chr7:48240792-48240874	H1-hESC	embryonic stem cell:	n/a	n/a
15	BACH1	chr7:48188083-48188178	H1-hESC	embryonic stem cell:	n/a	n/a
16	BACH1	chr7:48155716-48156408	H1-hESC	embryonic stem cell:	n/a	n/a
17	BACH1	chr7:48207853-48208049	H1-hESC	embryonic stem cell:	n/a	n/a
18	BACH1	chr7:48271579-48271852	H1-hESC	embryonic stem cell:	n/a	n/a
19	BATF	chr7:48338311-48338717	GM12878	blood:	n/a	n/a
20	BATF	chr7:48291306-48291870	GM12878	blood:	n/a	n/a
21	BATF	chr7:48170205-48170764	GM12878	blood:	n/a	n/a
22	BATF	chr7:48294726-48294922	GM12878	blood:	n/a	n/a
23	BATF	chr7:48291362-48291801	GM12878	blood:	n/a	n/a
24	BATF	chr7:48285785-48286103	GM12878	blood:	n/a	n/a
25	BATF	chr7:48285668-48286127	GM12878	blood:	n/a	n/a
26	BATF	chr7:48294654-48294978	GM12878	blood:	n/a	n/a
27	BCL11A	chr7:48285709-48286092	GM12878	blood:	n/a	n/a
28	BCL11A	chr7:48294690-48294938	GM12878	blood:	n/a	n/a
29	BCL11A	chr7:48338302-48338688	GM12878	blood:	n/a	n/a
30	BCL11A	chr7:48291390-48291765	GM12878	blood:	n/a	n/a
31	BCL3	chr7:48217131-48217386	GM12878	blood:	n/a	n/a
32	BCL3	chr7:48291391-48291682	GM12878	blood:	n/a	n/a
33	BCL3	chr7:48285640-48286075	GM12878	blood:	n/a	n/a
34	BCL3	chr7:48294619-48294966	GM12878	blood:	n/a	n/a
35	BCL3	chr7:48338337-48338739	GM12878	blood:	n/a	n/a
36	BCLAF1	chr7:48291285-48291674	GM12878	blood:	n/a	n/a
37	BHLHE40	chr7:48149738-48150035	GM12878	blood:	n/a	n/a
38	BHLHE40	chr7:48294391-48294424	GM12878	blood:	n/a	n/a
39	BHLHE40	chr7:48291414-48291704	GM12878	blood:	n/a	n/a
40	BHLHE40	chr7:48179542-48180141	HepG2	liver:	n/a	n/a
41	BHLHE40	chr7:48149787-48150065	K562	blood:	n/a	n/a
42	BHLHE40	chr7:48298658-48298686	GM12878	blood:	n/a	n/a
43	BHLHE40	chr7:48183794-48184265	HepG2	liver:	n/a	n/a
44	BRCA1	chr7:48149819-48150099	HepG2	liver:	n/a	n/a
45	BRCA1	chr7:48149755-48150107	Hela-S3	cervix:	n/a	n/a
46	BRCA1	chr7:48158266-48158456	Hela-S3	cervix:	n/a	n/a
47	CEBPB	chr7:48318281-48318407	Hela-S3	cervix:	n/a	n/a
48	CEBPB	chr7:48319620-48320074	IMR90	lung:	n/a	n/a
49	CEBPB	chr7:48194485-48195098	HepG2	liver:	n/a	n/a
50	CEBPB	chr7:48318208-48318512	A549	lung:	n/a	n/a

(count:550 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr7:48319696-48319746	HPAEpiC	pulmonary alveolar:	n/a
2	chr7:48319696-48319746	HPAEpiC	pulmonary alveolar:	n/a
3	chr7:48237515-48237565	ProgFib	skin:	n/a
4	chr7:48147044-48147094	Hela-S3	cervix:	n/a
5	chr7:48147052-48147102	SKMC	muscle:	n/a
6	chr7:48147044-48147094	HMEC	breast:	n/a
7	chr7:48170072-48170122	ovcar-3	ovarian:	n/a
8	chr7:48150007-48150057	HUVEC	blood vessel:	n/a
9	chr7:48150007-48150057	BJ	skin:	n/a
10	chr7:48147044-48147094	GM19239	blood:	n/a
11	chr7:48147956-48148006	HCM	heart:	n/a
12	chr7:48147130-48147180	HCM	heart:	n/a
13	chr7:48151761-48151811	HPAEpiC	pulmonary alveolar:	n/a
14	chr7:48151761-48151811	SAEC	small airway:	n/a
15	chr7:48170072-48170122	PFSK-1	brain:	n/a
16	chr7:48147956-48148006	NT2-D1	testis:	n/a
17	chr7:48237515-48237565	A549	lung:	n/a
18	chr7:48170072-48170122	NB4	blood:	n/a
19	chr7:48147044-48147094	SAEC	small airway:	n/a
20	chr7:48147044-48147094	HEEpiC	esophagus:	n/a
21	chr7:48319696-48319746	HEK293	kidney:	embryo
22	chr7:48147052-48147102	AG10803	skin:	n/a
23	chr7:48147044-48147094	HEK293	kidney:	embryo
24	chr7:48151761-48151811	HNPCEpiC	eye:	n/a
25	chr7:48147956-48148006	HCT-116	colon:	n/a
26	chr7:48147052-48147102	PrEC	prostate:	n/a
27	chr7:48147956-48148006	HL-60	blood:	n/a
28	chr7:48170072-48170122	NHBE	bronchial:	n/a
29	chr7:48151761-48151811	HCM	heart:	n/a
30	chr7:48147052-48147102	BE2_C	brain:	n/a
31	chr7:48147130-48147180	HCF	heart:	n/a
32	chr7:48147044-48147094	HepG2	liver:	n/a
33	chr7:48147052-48147102	HEEpiC	esophagus:	n/a
34	chr7:48237515-48237565	Jurkat	blood:	n/a
35	chr7:48147130-48147180	Hela-S3	cervix:	n/a
36	chr7:48319696-48319746	RPTEC	kidney:	n/a
37	chr7:48147130-48147180	GM12892	blood:	n/a
38	chr7:48150007-48150057	HRCEpiC	kidney:	n/a
39	chr7:48237515-48237565	HL-60	blood:	n/a
40	chr7:48147044-48147094	PANC-1	pancreas:	n/a
41	chr7:48150007-48150057	MCF10A-Er-Src	breast:	n/a
42	chr7:48151761-48151811	Hela-S3	cervix:	n/a
43	chr7:48237515-48237565	HNPCEpiC	eye:	n/a
44	chr7:48319696-48319746	IMR90	lung:	fetal
45	chr7:48170072-48170122	CMK	blood:	n/a
46	chr7:48319696-48319746	GM12891	blood:	n/a
47	chr7:48237515-48237565	AG09309	skin:	n/a
48	chr7:48147052-48147102	MCF10A-Er-Src	breast:	n/a
49	chr7:48150007-48150057	Jurkat	blood:	n/a
50	chr7:48147956-48148006	HNPCEpiC	eye:	n/a

(count:33 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr7:47947869..47949465-chr7:48190309..48191924,2	K562	blood:
2	chr6:66097248..66097748-chr7:48217360..48217884,2	MCF-7	breast:
3	chr20:22370610..22371195-chr7:48238769..48239532,2	MCF-7	breast:
4	chr7:48218815..48220519-chr7:48222828..48224344,2	K562	blood:
5	chr7:48031057..48031968-chr7:48149640..48150841,6	MCF-7	breast:
6	chr7:48279225..48282090-chr7:48283159..48287155,3	K562	blood:
7	chr7:48031394..48031943-chr7:48194189..48194981,3	MCF-7	breast:
8	chr7:48338977..48339698-chr7:48914621..48915709,3	MCF-7	breast:
9	chr7:48339292..48339820-chr7:49892008..49892873,2	MCF-7	breast:
10	chr7:48218815..48220519-chr7:48222828..48224344,2	K562	blood:
11	chr7:48179050..48179761-chr7:48194036..48194625,2	K562	blood:
12	chr7:47984558..47985573-chr7:48194072..48195154,6	MCF-7	breast:
13	chr7:48030749..48032126-chr7:48149476..48150428,18	MCF-7	breast:
14	chr7:47984580..47985444-chr7:48147461..48148213,2	MCF-7	breast:
15	chr7:47984841..47985353-chr7:48149509..48150107,2	MCF-7	breast:
16	chr7:48145468..48148267-chr7:48148520..48150065,2	K562	blood:
17	chr7:47892002..47892616-chr7:48194157..48194998,2	MCF-7	breast:
18	chr7:48016563..48017117-chr7:48149518..48150034,2	MCF-7	breast:
19	chr7:48179050..48179761-chr7:48194036..48194625,2	K562	blood:
20	chr7:47984460..47985513-chr7:48149453..48150415,8	K562	blood:
21	chr7:48017785..48019751-chr7:48148894..48151389,2	K562	blood:
22	chr7:48139477..48142399-chr7:48149802..48152490,2	K562	blood:
23	chr7:47984148..47985097-chr7:48194095..48195100,4	MCF-7	breast:
24	chr7:48008107..48009106-chr7:48149515..48150029,2	MCF-7	breast:
25	chr7:47983989..47986753-chr7:48157861..48159933,2	K562	blood:
26	chr7:48145468..48148267-chr7:48148520..48150065,2	K562	blood:
27	chr7:48140103..48142604-chr7:48146519..48148132,2	K562	blood:
28	chr7:48279225..48282090-chr7:48283159..48287155,3	K562	blood:
29	chr7:48339343..48339865-chr7:49892019..49892834,2	K562	blood:
30	chr7:48032161..48032696-chr7:48149524..48150293,2	MCF-7	breast:
31	chr7:47984512..47985468-chr7:48194046..48194997,4	K562	blood:
32	chr7:48031086..48031966-chr7:48194039..48195056,3	MCF-7	breast:
33	chr7:48210724..48213494-chr7:48218296..48220724,2	K562	blood:

No data

Variant related genes	Relation type
ABCA13	TF binding region
UPP1	TF binding region
ABCA13	CpG island
UPP1	CpG island
ENSG00000179869	chromatin interactions
ENSG00000136273	chromatin interactions

Extended variants
information (count: 7216 )
Associated
traits (count: 126 )

Variant overlapped rSNPs/rCNVs (count:7216 , 50 per page) page: 1 2 3 4 5 6 7 ... 145

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs543832464	chr7:48144103-48144104	Strong transcription Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
2	rs557626557	chr7:48144120-48144121	Strong transcription Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
3	rs577554894	chr7:48144134-48144135	Strong transcription Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
4	rs150475778	chr7:48144135-48144136	Strong transcription Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
5	rs547926891	chr7:48144192-48144193	Strong transcription Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
6	rs560112660	chr7:48144195-48144196	Strong transcription Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
7	rs529354151	chr7:48144223-48144224	Strong transcription Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs542740628	chr7:48144245-48144246	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs569596094	chr7:48144253-48144254	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs34556557	chr7:48144328-48144329	Strong transcription Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs531737809	chr7:48144345-48144346	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs574299474	chr7:48144416-48144417	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs184294106	chr7:48144476-48144477	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs367991577	chr7:48144481-48144482	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs571930802	chr7:48144567-48144568	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs187480543	chr7:48144582-48144583	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs35169380	chr7:48144632-48144633	Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
18	rs543304271	chr7:48144680-48144681	Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
19	rs191578437	chr7:48144697-48144698	Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
20	rs112054912	chr7:48144745-48144746	Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
21	rs184843897	chr7:48144749-48144750	Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
22	rs34080051	chr7:48144784-48144785	Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
23	rs554198845	chr7:48144786-48144787	Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
24	rs374863860	chr7:48144792-48144793	Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
25	rs572488877	chr7:48144799-48144800	Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
26	rs568657309	chr7:48144807-48144808	Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
27	rs537437835	chr7:48144827-48144828	Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
28	rs189298234	chr7:48144875-48144876	Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
29	rs561607839	chr7:48144876-48144877	Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
30	rs577841026	chr7:48144942-48144943	Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
31	rs138328800	chr7:48144943-48144944	Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
32	rs542985605	chr7:48144987-48144988	Strong transcription Weak transcription Genic enhancers Transcr. at gene 5' and 3'	n/a	n/a	Overlapped CNVs	n/a
33	rs74382262	chr7:48145008-48145009	Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
34	rs180872671	chr7:48145016-48145017	Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
35	rs542856673	chr7:48145055-48145056	Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
36	rs562963702	chr7:48145057-48145058	Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
37	rs576621482	chr7:48145082-48145083	Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
38	rs544099063	chr7:48145136-48145137	Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
39	rs184675990	chr7:48145180-48145181	Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
40	rs149603822	chr7:48145199-48145200	Strong transcription Weak transcription Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
41	rs527949289	chr7:48145210-48145211	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs541709349	chr7:48145211-48145212	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs565578836	chr7:48145212-48145213	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs532710643	chr7:48145229-48145230	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs547712759	chr7:48145282-48145283	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs559393521	chr7:48145283-48145284	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs6944892	chr7:48145286-48145287	Strong transcription Weak transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs550000556	chr7:48145289-48145290	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs568571575	chr7:48145320-48145321	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs548156229	chr7:48145345-48145346	Strong transcription Weak transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:126)

Disease	PMID	Source
Glioblastoma multiforme	17387387	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Biliary cancer	19435499	CNVD
Wilms tumour	21544195	CNVD
Neuroblastoma	18923191	CNVD
Glioma	21971842	CNVD
Glioblastoma multiforme	21080181	CNVD
Liposarcoma	21253554	CNVD
Medulloblastoma	21979893	CNVD
Oligodendroglial tumors	17285580	CNVD
Oral cancer	21386901	CNVD
colon cancer	17210682	CNVD
Lung adenocarcinoma	21810691	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Colorectal cancer	19359472	CNVD
Hypothalamic hamartomas	18252217	CNVD
Human rectal carcinomas	16397240	CNVD
Peripheral t-cell lymphoma	19118030	CNVD
Medulloblastoma	18056178	CNVD
Basal cell lymphoma	17170743	CNVD
Ewing''s sarcoma	21437220	CNVD
Thyroid cancer	19087340	CNVD
Seminomas	18059402	CNVD
Testicular cancer	18059402	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	19415332	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
T-cell lymphomas	19863542	CNVD
Malaria	21533027	CNVD
Melanoma	18172304	CNVD
Renal cell carcinoma	19461508	CNVD
head and neck squamous cell carcinoma	19289630	CNVD
Stenocardia	21860640	CNVD
Vasospasm	21860640	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Ewing''s sarcoma	17952124	CNVD
Lung cancer	18438408	CNVD
lymphocytic leukemia	21291569	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Cancer	21637783	CNVD
Squamous cell cancer	20885788	CNVD
Breast cancer	16397240	CNVD
Non-small cell lung cancer	21829676	CNVD
Glioblastoma multiforme	17002787	CNVD
Autism	22495311	CNVD
Glioblastoma multiforme	18628472	CNVD
Cancer	21183584	CNVD
Breast cancer	21785460	CNVD
Follicular lymphoma	20505157	CNVD
Williams-beuren syndrome	22470819	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	21364760	CNVD
Acute myeloid leukemia	21251322	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Multiple myeloma	16461302	CNVD
Glioblastoma multiforme	21750150	CNVD
Hepatocellular carcinoma	16750200	CNVD
Acute myeloid leukemia	17237825	CNVD
Gastric cancer	24379144	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Abnormal phenotypes	18644119	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Esophageal cancer	21851588	CNVD
Lung adenocarcinoma	17086460	CNVD
Lung cancer	17086460	CNVD
Non-small cell lung cancer	17643093	CNVD
Ovarian cancer	18182111	CNVD
Colorectal cancer	16272173	CNVD
Glioblastoma multiforme	17369134	CNVD
Barrett''s esophagus	18559552	CNVD
head and neck squamous cell carcinoma	16943533	CNVD
Anaplastic thyroid cancer	17079354	CNVD
Basal-like breast cancer	17875215	CNVD
Colorectal cancer	16882699	CNVD
Colorectal cancer	18794099	CNVD
Gastrointestinal stromal cancer	17643098	CNVD
Lung cancer	18381415	CNVD
Metastatic colorectal cancer	17664472	CNVD
Non-small cell lung cancer	19255323	CNVD
Non-small cell lung cancer	17673923	CNVD
Non-small cell lung cancer	17975165	CNVD
Non-small cell lung cancer	19622585	CNVD
Ovarian cancer	16607561	CNVD
Squamous cell cancer	19670535	CNVD
head and neck squamous cell carcinoma	16818711	CNVD
small cell lung cancer	18829487	CNVD
Breast cancer	17661082	CNVD
Adenocarcinoma	19260752	CNVD
Esophageal cancer	16575012	CNVD
Lung adenocarcinoma	19138956	CNVD
Lung adenocarcinoma	18379350	CNVD
Lung adenocarcinoma	18258923	CNVD
Lung cancer	19138956	CNVD
Lung cancer	18379350	CNVD
Lung cancer	18258923	CNVD
Non-small cell lung cancer	18304967	CNVD
Non-small cell lung cancer	19451690	CNVD
Non-small cell lung cancer	19260752	CNVD
Non-small cell lung cancer	17079354	CNVD
Non-small cell lung cancer	18559607	CNVD
Rectal cancer	19506820	CNVD
Triple-negative breast cancer	18950515	CNVD
head and neck squamous cell carcinoma	18813952	CNVD
Non-small cell lung cancer	17504988	CNVD
Non-small cell lung cancer	16943533	CNVD
Non-small cell lung cancer	18509184	CNVD
head and neck squamous cell carcinoma	17538160	CNVD
Colorectal cancer	19712476	CNVD
Lung adenocarcinoma	19525976	CNVD
Lung cancer	19525976	CNVD
Lung cancer	19671679	CNVD
head and neck squamous cell carcinoma	17671120	CNVD
small cell lung cancer	20016488	CNVD
Myelofibrosis	22110671	CNVD
Lissencephaly	21572526	CNVD
Breast cancer	17603634	CNVD
Acute myeloid leukemia	16864856	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Colorectal cancer	21645411	CNVD
Breast cancer	22522925	CNVD
Autism	22495309	CNVD

Chromatin state (count:1297 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:48130200-48146800	Weak transcription	Colon Smooth Muscle	Colon
2	chr7:48130200-48148200	Weak transcription	Right Atrium	heart
3	chr7:48130400-48149800	Weak transcription	Fetal Kidney	kidney
4	chr7:48130400-48150000	Weak transcription	Pancreatic Islets	Pancreatic Islet
5	chr7:48130800-48149200	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr7:48131000-48145200	Strong transcription	Rectal Mucosa Donor 31	rectum
7	chr7:48131000-48149200	Strong transcription	Rectal Mucosa Donor 29	rectum
8	chr7:48131200-48145000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr7:48131200-48148800	Strong transcription	H1 Cell Line	embryonic stem cell
10	chr7:48131200-48149200	Strong transcription	Duodenum Mucosa	Duodenum
11	chr7:48131400-48149000	Strong transcription	HUES48 Cell Line	embryonic stem cell
12	chr7:48131400-48149400	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
13	chr7:48131600-48148800	Strong transcription	HUES64 Cell Line	embryonic stem cell
14	chr7:48131600-48149000	Strong transcription	iPS-20b Cell Line	embryonic stem cell
15	chr7:48131600-48149600	Weak transcription	Thymus	Thymus
16	chr7:48132200-48146400	Weak transcription	Small Intestine	intestine
17	chr7:48132200-48149200	Strong transcription	HUES6 Cell Line	embryonic stem cell
18	chr7:48134200-48149600	Weak transcription	GM12878-XiMat	blood
19	chr7:48134400-48148000	Weak transcription	Cortex derived primary cultured neurospheres	brain
20	chr7:48135200-48149000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
21	chr7:48135200-48149400	Strong transcription	A549	lung
22	chr7:48136200-48144800	Weak transcription	Fetal Stomach	stomach
23	chr7:48137200-48144800	Strong transcription	Osteobl	bone
24	chr7:48137200-48149400	Strong transcription	Sigmoid Colon	Sigmoid Colon
25	chr7:48137600-48149200	Strong transcription	HMEC	breast
26	chr7:48137600-48150200	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
27	chr7:48137800-48149000	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
28	chr7:48137800-48149000	Strong transcription	Lung	lung
29	chr7:48137800-48149200	Strong transcription	Foreskin Fibroblast Primary Cells skin01	Skin
30	chr7:48137800-48149200	Strong transcription	NHEK	skin
31	chr7:48137800-48149600	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
32	chr7:48137800-48152400	Weak transcription	HSMM	muscle
33	chr7:48138000-48149800	Weak transcription	Primary B cells from peripheral blood	blood
34	chr7:48138200-48148800	Strong transcription	Duodenum Smooth Muscle	Duodenum
35	chr7:48138400-48148800	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
36	chr7:48138400-48149200	Strong transcription	Esophagus	oesophagus
37	chr7:48138400-48149800	Weak transcription	Primary B cells from cord blood	blood
38	chr7:48138600-48145000	Strong transcription	Right Ventricle	heart
39	chr7:48138600-48148600	Strong transcription	HUVEC	blood vessel
40	chr7:48138600-48149000	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
41	chr7:48138800-48149200	Strong transcription	Primary monocytes fromperipheralblood	blood
42	chr7:48138800-48149800	Weak transcription	Primary hematopoietic stem cells	blood
43	chr7:48138800-48156200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
44	chr7:48139200-48148600	Strong transcription	Placenta	Placenta
45	chr7:48139400-48149600	Weak transcription	Fetal Heart	heart
46	chr7:48139600-48149000	Strong transcription	Monocytes-CD14+_RO01746	blood
47	chr7:48139800-48148600	Strong transcription	ES-I3 Cell Line	embryonic stem cell
48	chr7:48139800-48149400	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
49	chr7:48139800-48149400	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
50	chr7:48140000-48149400	Strong transcription	Primary neutrophils fromperipheralblood	blood

The 2.0 version of rSNPBase

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