Variant report

Variant nsv1033773
Chromosome Location chr6:58447068-58774716
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:200 , 50 per page) page: 1 2 3 4
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:58450800-58453400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
2 chr6:58451000-58452000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr6:58452000-58452600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr6:58452600-58452800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr6:58452800-58454200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr6:58453400-58454200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
7 chr6:58454200-58454800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
8 chr6:58454200-58455600 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr6:58454400-58454800 Enhancers Pancreatic Islets Pancreatic Islet
10 chr6:58454800-58455400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
11 chr6:58455400-58455600 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
12 chr6:58518400-58519600 Enhancers NHEK skin
13 chr6:58519200-58520000 Enhancers Muscle Satellite Cultured Cells --
14 chr6:58519600-58520200 Active TSS NHEK skin
15 chr6:58519800-58520200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
16 chr6:58520200-58524000 Weak transcription NHEK skin
17 chr6:58522000-58522200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
18 chr6:58524000-58525800 Enhancers NHEK skin
19 chr6:58591000-58591400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr6:58607000-58607400 Active TSS Stomach Mucosa stomach
21 chr6:58614800-58617800 Enhancers NHEK skin
22 chr6:58668600-58669200 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
23 chr6:58684400-58685400 Enhancers NHEK skin
24 chr6:58748800-58750400 ZNF genes & repeats Liver Liver
25 chr6:58762800-58763200 ZNF genes & repeats Liver Liver
26 chr6:58764600-58765800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr6:58765200-58769400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr6:58768000-58771000 ZNF genes & repeats Liver Liver
29 chr6:58769400-58769800 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr6:58769600-58770000 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
31 chr6:58769800-58773600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr6:58770000-58773400 Weak transcription Aorta Aorta
33 chr6:58770600-58770800 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
34 chr6:58770800-58773400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr6:58771000-58773400 Weak transcription HUES48 Cell Line embryonic stem cell
36 chr6:58771000-58773400 Weak transcription Liver Liver
37 chr6:58771200-58773400 Weak transcription Adipose Nuclei Adipose
38 chr6:58772600-58773200 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr6:58773400-58773600 Active TSS Aorta Aorta
40 chr6:58773400-58773600 Active TSS Ovary ovary
41 chr6:58773400-58773600 Active TSS Psoas Muscle Psoas
42 chr6:58773400-58774000 ZNF genes & repeats Primary neutrophils fromperipheralblood blood
43 chr6:58773400-58774000 Flanking Bivalent TSS/Enh Hela-S3 cervix
44 chr6:58773400-58774800 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
45 chr6:58773400-58774800 ZNF genes & repeats Brain Hippocampus Middle brain
46 chr6:58773400-58774800 ZNF genes & repeats Colon Smooth Muscle Colon
47 chr6:58773400-58774800 ZNF genes & repeats Duodenum Mucosa Duodenum
48 chr6:58773400-58774800 ZNF genes & repeats Fetal Lung lung
49 chr6:58773400-58774800 ZNF genes & repeats Rectal Smooth Muscle rectum
50 chr6:58773400-58774800 ZNF genes & repeats Sigmoid Colon Sigmoid Colon

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