Variant report
Variant | nsv1033794 |
---|---|
Chromosome Location | chr6:61886428-62877254 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:2334)
- CpG islands (count:305)
- Chromatin interactive region (count:31)
- LncRNA region (count:9)
- Mature miRNA region (count: 0)
- miRNA target sites (count:1)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr6:62518943-62519292 | HepG2 | liver: | n/a | n/a |
2 | ATF1 | chr6:61913231-61913699 | K562 | blood: | n/a | n/a |
3 | ATF1 | chr6:61900659-61901030 | K562 | blood: | n/a | n/a |
4 | ATF1 | chr6:61893681-61894051 | K562 | blood: | n/a | n/a |
5 | BACH1 | chr6:62236939-62236976 | H1-hESC | embryonic stem cell: | n/a | n/a |
6 | BACH1 | chr6:62501051-62501180 | K562 | blood: | n/a | n/a |
7 | BACH1 | chr6:61896330-61896468 | K562 | blood: | n/a | n/a |
8 | BACH1 | chr6:61913344-61914545 | K562 | blood: | n/a | n/a |
9 | BACH1 | chr6:62328176-62328215 | K562 | blood: | n/a | n/a |
10 | BACH1 | chr6:62291135-62291160 | K562 | blood: | n/a | n/a |
11 | BATF | chr6:61913277-61913558 | GM12878 | blood: | n/a | n/a |
12 | BATF | chr6:61911262-61911961 | GM12878 | blood: | n/a | n/a |
13 | BATF | chr6:61905135-61905330 | GM12878 | blood: | n/a | n/a |
14 | BATF | chr6:61906500-61906883 | GM12878 | blood: | n/a | n/a |
15 | BATF | chr6:61913229-61913644 | GM12878 | blood: | n/a | n/a |
16 | BATF | chr6:62248776-62249065 | GM12878 | blood: | n/a | n/a |
17 | BATF | chr6:61905067-61905506 | GM12878 | blood: | n/a | n/a |
18 | BATF | chr6:61913931-61914503 | GM12878 | blood: | n/a | n/a |
19 | BATF | chr6:62283970-62284243 | GM12878 | blood: | n/a | n/a |
20 | BATF | chr6:61911243-61911684 | GM12878 | blood: | n/a | n/a |
21 | BATF | chr6:61906495-61906882 | GM12878 | blood: | n/a | n/a |
22 | BATF | chr6:61903872-61904180 | GM12878 | blood: | n/a | n/a |
23 | BATF | chr6:61901621-61902377 | GM12878 | blood: | n/a | n/a |
24 | BATF | chr6:61888373-61888601 | GM12878 | blood: | n/a | n/a |
25 | BATF | chr6:61900708-61900932 | GM12878 | blood: | n/a | n/a |
26 | BATF | chr6:61903986-61904140 | GM12878 | blood: | n/a | n/a |
27 | BATF | chr6:61900758-61900946 | GM12878 | blood: | n/a | n/a |
28 | BATF | chr6:62248793-62249038 | GM12878 | blood: | n/a | n/a |
29 | BATF | chr6:61913946-61914451 | GM12878 | blood: | n/a | n/a |
30 | BATF | chr6:62283972-62284263 | GM12878 | blood: | n/a | n/a |
31 | BCL11A | chr6:61913343-61913537 | H1-hESC | embryonic stem cell: | n/a | n/a |
32 | BCL11A | chr6:61903857-61904265 | GM12878 | blood: | n/a | n/a |
33 | BCL11A | chr6:61900705-61900890 | GM12878 | blood: | n/a | n/a |
34 | BCL11A | chr6:61913928-61914511 | GM12878 | blood: | n/a | n/a |
35 | BCL11A | chr6:61906474-61906877 | GM12878 | blood: | n/a | n/a |
36 | BCL11A | chr6:62283933-62284208 | GM12878 | blood: | n/a | n/a |
37 | BCL11A | chr6:61901624-61902402 | GM12878 | blood: | n/a | n/a |
38 | BCL11A | chr6:61903960-61904124 | GM12878 | blood: | n/a | n/a |
39 | BCL11A | chr6:61906514-61906766 | GM12878 | blood: | n/a | n/a |
40 | BCL11A | chr6:61907323-61907673 | GM12878 | blood: | n/a | n/a |
41 | BCL11A | chr6:61908296-61908564 | GM12878 | blood: | n/a | n/a |
42 | BCL11A | chr6:61913182-61913685 | GM12878 | blood: | n/a | n/a |
43 | BCL11A | chr6:61911238-61911684 | GM12878 | blood: | n/a | n/a |
44 | BCL11A | chr6:61911693-61911939 | GM12878 | blood: | n/a | n/a |
45 | BCL11A | chr6:62283978-62284284 | GM12878 | blood: | n/a | n/a |
46 | BCL11A | chr6:61911209-61912015 | GM12878 | blood: | n/a | n/a |
47 | BCL11A | chr6:61905116-61905330 | GM12878 | blood: | n/a | n/a |
48 | BCL11A | chr6:61913252-61913626 | GM12878 | blood: | n/a | n/a |
49 | BCL11A | chr6:61913952-61914436 | GM12878 | blood: | n/a | n/a |
50 | BCL11A | chr6:61910577-61911034 | GM12878 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr6:62737607-62737657 | HCF | heart: | n/a |
2 | chr6:62642433-62642483 | SK-N-SH | brain: | n/a |
3 | chr6:62284299-62284349 | GM12892 | blood: | n/a |
4 | chr6:62284299-62284349 | K562 | blood: | n/a |
5 | chr6:62642433-62642483 | RPTEC | kidney: | n/a |
6 | chr6:62224316-62224366 | GM12891 | blood: | n/a |
7 | chr6:62737607-62737657 | GM06990 | blood: | n/a |
8 | chr6:62224316-62224366 | AG09309 | skin: | n/a |
9 | chr6:62596341-62596391 | NHBE | bronchial: | n/a |
10 | chr6:62596341-62596391 | GM12891 | blood: | n/a |
11 | chr6:62737607-62737657 | HCM | heart: | n/a |
12 | chr6:62224316-62224366 | Hela-S3 | cervix: | n/a |
13 | chr6:62596341-62596391 | SK-N-SH_RA | brain: | n/a |
14 | chr6:62596341-62596391 | HNPCEpiC | eye: | n/a |
15 | chr6:62596341-62596391 | AG10803 | skin: | n/a |
16 | chr6:62737607-62737657 | MCF10A-Er-Src | breast: | n/a |
17 | chr6:62284299-62284349 | BJ | skin: | n/a |
18 | chr6:62224316-62224366 | PrEC | prostate: | n/a |
19 | chr6:62284299-62284349 | PANC-1 | pancreas: | n/a |
20 | chr6:62737607-62737657 | Jurkat | blood: | n/a |
21 | chr6:62642433-62642483 | AG04450 | lung: | fetal |
22 | chr6:62596341-62596391 | AoSMC | blood vessel: | n/a |
23 | chr6:62596341-62596391 | BJ | skin: | n/a |
24 | chr6:62284299-62284349 | HEEpiC | esophagus: | n/a |
25 | chr6:62596341-62596391 | RPTEC | kidney: | n/a |
26 | chr6:62224316-62224366 | SK-N-MC | brain: | n/a |
27 | chr6:62642433-62642483 | GM06990 | blood: | n/a |
28 | chr6:62737607-62737657 | HIPEpiC | eye: | n/a |
29 | chr6:62737607-62737657 | HMEC | breast: | n/a |
30 | chr6:62642433-62642483 | GM12878 | blood: | n/a |
31 | chr6:62224316-62224366 | AG04450 | lung: | fetal |
32 | chr6:62224316-62224366 | HEEpiC | esophagus: | n/a |
33 | chr6:62284299-62284349 | NHBE | bronchial: | n/a |
34 | chr6:62596341-62596391 | SK-N-MC | brain: | n/a |
35 | chr6:62284299-62284349 | SK-N-SH | brain: | n/a |
36 | chr6:62642433-62642483 | Jurkat | blood: | n/a |
37 | chr6:62224316-62224366 | NT2-D1 | testis: | n/a |
38 | chr6:62596341-62596391 | AG09319 | gingival: | n/a |
39 | chr6:62642433-62642483 | IMR90 | lung: | fetal |
40 | chr6:62737607-62737657 | ProgFib | skin: | n/a |
41 | chr6:62596341-62596391 | GM12892 | blood: | n/a |
42 | chr6:62642433-62642483 | NHBE | bronchial: | n/a |
43 | chr6:62737607-62737657 | NT2-D1 | testis: | n/a |
44 | chr6:62642433-62642483 | PrEC | prostate: | n/a |
45 | chr6:62642433-62642483 | HCM | heart: | n/a |
46 | chr6:62596341-62596391 | ECC-1 | luminal epithelium: | n/a |
47 | chr6:62642433-62642483 | MCF10A-Er-Src | breast: | n/a |
48 | chr6:62284299-62284349 | HepG2 | liver: | n/a |
49 | chr6:62737607-62737657 | HUVEC | blood vessel: | n/a |
50 | chr6:62284299-62284349 | NHDF-neo | bronchial: | n/a |
(count:31 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr6:62852057..62854070-chr6:62855241..62858140,2 | MCF-7 | breast: | |
2 | chr6:62621722..62623294-chr6:62626600..62628744,2 | MCF-7 | breast: | |
3 | chr6:58777651..58778267-chr6:61909313..61909813,3 | MCF-7 | breast: | |
4 | chr6:57766644..57767228-chr6:62859661..62860581,2 | MCF-7 | breast: | |
5 | chr6:62776601..62778161-chr6:62783168..62785146,2 | K562 | blood: | |
6 | chr6:62518549..62519303-chr6:63600674..63601315,2 | MCF-7 | breast: | |
7 | chr6:62338455..62341416-chr6:62349346..62350925,2 | K562 | blood: | |
8 | chr6:57445367..57446031-chr6:62860058..62860574,2 | MCF-7 | breast: | |
9 | chr6:62338455..62341416-chr6:62349346..62350925,2 | K562 | blood: | |
10 | chr6:62545749..62547961-chr6:62548535..62550868,2 | MCF-7 | breast: | |
11 | chr6:62852057..62854070-chr6:62855241..62858140,2 | MCF-7 | breast: | |
12 | chr20:45985491..45988318-chr6:62588370..62590548,2 | MCF-7 | breast: | |
13 | chr15:59605919..59608899-chr6:62197305..62198810,2 | MCF-7 | breast: | |
14 | chr6:58776858..58779077-chr6:61908295..61909815,2 | MCF-7 | breast: | |
15 | chr6:62519001..62519629-chr6:62859955..62860555,3 | MCF-7 | breast: | |
16 | chr1:109802150..109805070-chr6:62296846..62299543,2 | MCF-7 | breast: | |
17 | chr3:113873972..113874534-chr6:62859704..62860673,2 | MCF-7 | breast: | |
18 | chr6:62520772..62522597-chr6:62523953..62526303,2 | K562 | blood: | |
19 | chr6:62518763..62519292-chr6:62993656..62994388,2 | MCF-7 | breast: | |
20 | chr6:58777712..58778738-chr6:61909295..61909815,6 | MCF-7 | breast: | |
21 | chr6:62519001..62519629-chr6:62859955..62860555,3 | MCF-7 | breast: | |
22 | chr6:62776601..62778161-chr6:62783168..62785146,2 | K562 | blood: | |
23 | chr6:62621722..62623294-chr6:62626600..62628744,2 | MCF-7 | breast: | |
24 | chr6:58777671..58778345-chr6:61909292..61909815,4 | MCF-7 | breast: | |
25 | chr1:121483338..121485429-chr6:61912530..61914360,3 | MCF-7 | breast: | |
26 | chr6:62520772..62522597-chr6:62523953..62526303,2 | K562 | blood: | |
27 | chr6:62545749..62547961-chr6:62548535..62550868,2 | MCF-7 | breast: | |
28 | chr3:64125661..64126400-chr6:61912686..61913542,2 | MCF-7 | breast: | |
29 | chr6:62761124..62761875-chrX:154244873..154245663,2 | MCF-7 | breast: | |
30 | chr4:164676002..164676634-chr6:62381037..62381706,2 | MCF-7 | breast: | |
31 | chr6:58777707..58778511-chr6:61909313..61909813,2 | MCF-7 | breast: |
(count:9 , 50 per page) page:
1
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-KHDRBS2-1 | chr6:62371187-62371274 | XLOC_005755 |
2 | lnc-KHDRBS2-1 | chr6:62340206-62340406 | NONHSAT113330 |
3 | lnc-KHDRBS2-1 | chr6:62362159-62362222 | NONHSAT113330 |
4 | lnc-KHDRBS2-1 | chr6:62362160-62362222 | XLOC_005755 |
5 | lnc-KHDRBS2-1 | chr6:62371186-62371274 | NONHSAT113330 |
6 | lnc-KHDRBS2-1 | chr6:62369022-62369055 | XLOC_005755 |
7 | lnc-KHDRBS2-1 | chr6:62340207-62340406 | XLOC_005755 |
8 | lnc-KHDRBS2-4 | chr6:61996403-61996816 | NONHSAT113326 |
9 | lnc-KHDRBS2-1 | chr6:62369021-62369055 | NONHSAT113330 |
No data |
(count:1 , 50 per page) page:
1
No. | miRNA target gene | miRNA name | Chromosome Location | mirBase accession |
---|---|---|---|---|
1 | KHDRBS2 | hsa-miR-335-5p | chr6:62390601-62390623 |
Variant related genes | Relation type |
---|---|
ENSG00000221606 | TF binding region |
MTRNR2L9 | TF binding region |
ENSG00000220030 | TF binding region |
ENSG00000250686 | TF binding region |
ENSG00000221606 | CpG island |
MTRNR2L9 | CpG island |
ENSG00000220030 | CpG island |
ENSG00000250686 | CpG island |
ENSG00000101040 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs186017956 | chr6:61886467-61886468 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
2 | rs12197391 | chr6:61886470-61886471 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
3 | rs535060432 | chr6:61886478-61886479 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
4 | rs374731936 | chr6:61886483-61886484 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
5 | rs115202744 | chr6:61886491-61886492 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
6 | rs372876822 | chr6:61886503-61886504 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
7 | rs527685103 | chr6:61886507-61886508 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
8 | rs546846857 | chr6:61886508-61886509 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
9 | rs561852618 | chr6:61886559-61886560 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
10 | rs374492317 | chr6:61886607-61886608 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
11 | rs189954242 | chr6:61886615-61886616 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
12 | rs550497970 | chr6:61886627-61886628 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
13 | rs200413278 | chr6:61886628-61886629 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
14 | rs181220571 | chr6:61886631-61886632 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
15 | rs574447876 | chr6:61886633-61886634 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
16 | rs539495563 | chr6:61886641-61886642 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
17 | rs551501703 | chr6:61886675-61886676 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
18 | rs114551949 | chr6:61886688-61886689 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
19 | rs533567422 | chr6:61886730-61886731 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
20 | rs543323959 | chr6:61886784-61886785 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
21 | rs201594540 | chr6:61886830-61886831 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
22 | rs570912869 | chr6:61886833-61886834 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
23 | rs555375055 | chr6:61886853-61886854 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
24 | rs533843389 | chr6:61886873-61886874 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
25 | rs184979604 | chr6:61886876-61886877 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
26 | rs111954791 | chr6:61886877-61886878 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
27 | rs200369136 | chr6:61886903-61886904 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
28 | rs111912873 | chr6:61886910-61886911 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
29 | rs200042214 | chr6:61886916-61886917 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
30 | rs113111598 | chr6:61886922-61886923 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
31 | rs538578421 | chr6:61886928-61886929 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
32 | rs201699973 | chr6:61886931-61886932 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
33 | rs368858401 | chr6:61886933-61886934 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
34 | rs370858133 | chr6:61886939-61886940 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
35 | rs556800841 | chr6:61886986-61886987 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
36 | rs113728364 | chr6:61886992-61886993 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
37 | rs372036293 | chr6:61886995-61886996 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
38 | rs190854367 | chr6:61887010-61887011 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
39 | rs577825991 | chr6:61887018-61887019 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
40 | rs545056891 | chr6:61887074-61887075 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
41 | rs182990624 | chr6:61887119-61887120 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
42 | rs572373525 | chr6:61887120-61887121 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
43 | rs542642549 | chr6:61887168-61887169 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
44 | rs149894702 | chr6:61887172-61887173 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
45 | rs188691293 | chr6:61887202-61887203 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
46 | rs550900930 | chr6:61887209-61887210 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
47 | rs192504623 | chr6:61887239-61887240 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
48 | rs73481557 | chr6:61887294-61887295 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
49 | rs551461357 | chr6:61887295-61887296 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
50 | rs114916802 | chr6:61887303-61887304 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Wilms tumour | 21544195 | CNVD |
Uveal melanoma | 21693616 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Biliary cancer | 19435499 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Malaria | 21533027 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Ewing''s sarcoma | 17952124 | CNVD |
Autism | 21448237 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Autism | 22495311 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Gastric cancer | 17908304 | CNVD |
Biliary cancer | 20360734 | CNVD |
Breast cancer | 20360734 | CNVD |
Coronary artery disease | 20360734 | CNVD |
Crohn''s disease | 20360734 | CNVD |
Hypertension | 20360734 | CNVD |
Rheumatoid arthritis | 20360734 | CNVD |
Type 1 diabetes | 20360734 | CNVD |
Type 2 diabetes | 20360734 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Neuroblastoma | 18923191 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Breast cancer | 17603634 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Systemic lupus erythematosus | 17503323 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Gastrointestinal stromal cancer | 20818650 | CNVD |
Melanoma | 18172304 | CNVD |
Esophageal squamous carcinoma | 18350619 | CNVD |
Cancer | 21637783 | CNVD |
Malignant peripheral nerve sheath tumor | 18522746 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Acute lymphoblastic leukemia | 17443227 | CNVD |
T-cell lymphomas | 19863542 | CNVD |
Oral squamous cell carcinoma | 17134496 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Lung cancer | 18438408 | CNVD |
Lung cancer | 19547694 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Follicular lymphoma | 19010834 | CNVD |
Non-small cell lung cancer | 21044232 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 21264507 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Phyllodes tumor | 17334353 | CNVD |
Breast cancer | 16608533 | CNVD |
Non-small cell lung cancer | 21385341 | CNVD |
Prostate cancer | 16705090 | CNVD |
Adenoid cystic carcinoma | 17372589 | CNVD |
Ependymoma | 16718352 | CNVD |
High-proliferative meningiomas | 17937814 | CNVD |
Intracranial tumor | 16823260 | CNVD |
Monoclonal gammopathy of undetermined significance | 17077331 | CNVD |
Basal cell lymphoma | 16317097 | CNVD |
Diffuse large b-cell lymphoma | 16317097 | CNVD |
Breast cancer | 21364760 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Schizophrenia | 23813976 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Tetralogy of Fallot | 22912587 | CNVD |
Cancer | 20164919 | CNVD |
Non-syndromic sensorineural hearing loss | 15273396 | CNVD |
Schizophrenia | 20967226 | CNVD |
Breast cancer | 22522925 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Non-syndromic sensorineural hearing loss | 19587683 | CNVD |
Ovarian clear cell carcinoma | 21343371 | CNVD |
Medulloblastoma | 21163964 | CNVD |
Acute lymphoblastic leukemia | 18458336 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Autism | 19492091 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr6:61885600-61888800 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
2 | chr6:61887000-61890400 | ZNF genes & repeats | Liver | Liver |
3 | chr6:61888000-61894200 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
4 | chr6:61890200-61890400 | ZNF genes & repeats | HepG2 | liver |
5 | chr6:61892600-61894200 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
6 | chr6:61893400-61894000 | ZNF genes & repeats | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
7 | chr6:61893600-61894000 | ZNF genes & repeats | ES-I3 Cell Line | embryonic stem cell |
8 | chr6:61893600-61894000 | ZNF genes & repeats | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
9 | chr6:61893600-61894000 | ZNF genes & repeats | HUES6 Cell Line | embryonic stem cell |
10 | chr6:61893600-61894000 | ZNF genes & repeats | Left Ventricle | heart |
11 | chr6:61893600-61894200 | ZNF genes & repeats | Primary hematopoietic stem cells short term culture | blood |
12 | chr6:61893800-61894000 | ZNF genes & repeats | H9 Cell Line | embryonic stem cell |
13 | chr6:61893800-61894000 | Enhancers | iPS DF 6.9 Cell Line | embryonic stem cell |
14 | chr6:61893800-61905800 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
15 | chr6:61894000-61901800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
16 | chr6:61894800-61901800 | Weak transcription | K562 | blood |
17 | chr6:61896400-61902400 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
18 | chr6:61897000-61898000 | ZNF genes & repeats | HUVEC | blood vessel |
19 | chr6:61897600-61898000 | ZNF genes & repeats | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
20 | chr6:61898000-61900600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
21 | chr6:61900200-61902800 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
22 | chr6:61900600-61901000 | ZNF genes & repeats | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
23 | chr6:61900600-61902400 | ZNF genes & repeats | Duodenum Smooth Muscle | Duodenum |
24 | chr6:61900600-61905400 | ZNF genes & repeats | ES-I3 Cell Line | embryonic stem cell |
25 | chr6:61901000-61901800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
26 | chr6:61901000-61901800 | Weak transcription | Brain Angular Gyrus | brain |
27 | chr6:61901400-61902400 | ZNF genes & repeats | Primary T cells from cord blood | blood |
28 | chr6:61901600-61902400 | ZNF genes & repeats | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
29 | chr6:61901600-61902600 | ZNF genes & repeats | HepG2 | liver |
30 | chr6:61901800-61902000 | ZNF genes & repeats | ES-WA7 Cell Line | embryonic stem cell |
31 | chr6:61901800-61902000 | ZNF genes & repeats | iPS-15b Cell Line | embryonic stem cell |
32 | chr6:61901800-61902000 | ZNF genes & repeats | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
33 | chr6:61901800-61902000 | ZNF genes & repeats | Primary T helper naive cells fromperipheralblood | blood |
34 | chr6:61901800-61902000 | ZNF genes & repeats | Primary T killer naive cells fromperipheralblood | blood |
35 | chr6:61901800-61902000 | ZNF genes & repeats | Brain Hippocampus Middle | brain |
36 | chr6:61901800-61902000 | ZNF genes & repeats | Fetal Lung | lung |
37 | chr6:61901800-61902000 | ZNF genes & repeats | A549 | lung |
38 | chr6:61901800-61902000 | ZNF genes & repeats | HSMMtube | muscle |
39 | chr6:61901800-61902000 | ZNF genes & repeats | NHDF-Ad | bronchial |
40 | chr6:61901800-61902200 | ZNF genes & repeats | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
41 | chr6:61901800-61902200 | ZNF genes & repeats | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
42 | chr6:61901800-61902200 | ZNF genes & repeats | H9 Cell Line | embryonic stem cell |
43 | chr6:61901800-61902200 | ZNF genes & repeats | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
44 | chr6:61901800-61902200 | ZNF genes & repeats | HUES6 Cell Line | embryonic stem cell |
45 | chr6:61901800-61902200 | ZNF genes & repeats | iPS DF 6.9 Cell Line | embryonic stem cell |
46 | chr6:61901800-61902200 | ZNF genes & repeats | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
47 | chr6:61901800-61902200 | ZNF genes & repeats | Primary hematopoietic stem cells short term culture | blood |
48 | chr6:61901800-61902200 | ZNF genes & repeats | Primary T helper memory cells from peripheral blood 2 | blood |
49 | chr6:61901800-61902200 | ZNF genes & repeats | Primary T helper naive cells from peripheral blood | blood |
50 | chr6:61901800-61902200 | ZNF genes & repeats | Primary T helper memory cells from peripheral blood 1 | blood |