Variant report

Variant	nsv1034094
Chromosome Location	chr5:37406859-37666704
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1480)
CpG islands
(count:122)
Chromatin interactive
region (count:90)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1480 , 50 per page) page: 1 2 3 4 5 6 7 ... 30

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr5:37424736-37424788	HepG2	liver:	n/a	n/a
2	ARID3A	chr5:37412949-37413405	K562	blood:	n/a	n/a
3	ARID3A	chr5:37555087-37555396	K562	blood:	n/a	n/a
4	ARID3A	chr5:37435813-37436000	K562	blood:	n/a	chr5:37435891-37435907
5	ARID3A	chr5:37552742-37553918	K562	blood:	n/a	n/a
6	ARID3A	chr5:37566412-37566482	K562	blood:	n/a	n/a
7	ARID3A	chr5:37561556-37561928	K562	blood:	n/a	n/a
8	ARID3A	chr5:37554224-37554305	K562	blood:	n/a	n/a
9	ARID3A	chr5:37576244-37577007	K562	blood:	n/a	chr5:37576689-37576705 chr5:37576688-37576704
10	ARID3A	chr5:37435399-37435833	HepG2	liver:	n/a	n/a
11	ARID3A	chr5:37413045-37413386	HepG2	liver:	n/a	n/a
12	ATF1	chr5:37576224-37576625	K562	blood:	n/a	n/a
13	ATF1	chr5:37413139-37413402	K562	blood:	n/a	n/a
14	ATF1	chr5:37552974-37553744	K562	blood:	n/a	n/a
15	ATF1	chr5:37614336-37614416	K562	blood:	n/a	n/a
16	ATF3	chr5:37413096-37413476	K562	blood:	n/a	n/a
17	BACH1	chr5:37512136-37512171	K562	blood:	n/a	n/a
18	BACH1	chr5:37637658-37637891	H1-hESC	embryonic stem cell:	n/a	chr5:37637759-37637773
19	BACH1	chr5:37553100-37553687	K562	blood:	n/a	n/a
20	BATF	chr5:37413135-37413360	GM12878	blood:	n/a	n/a
21	BCL11A	chr5:37436356-37436593	GM12878	blood:	n/a	n/a
22	BHLHE40	chr5:37553092-37553794	K562	blood:	n/a	n/a
23	BHLHE40	chr5:37576290-37576510	K562	blood:	n/a	n/a
24	BHLHE40	chr5:37555099-37555292	K562	blood:	n/a	n/a
25	BHLHE40	chr5:37577033-37577174	K562	blood:	n/a	n/a
26	BHLHE40	chr5:37569663-37569665	K562	blood:	n/a	n/a
27	BRCA1	chr5:37413063-37413459	Hela-S3	cervix:	n/a	n/a
28	CBX3	chr5:37562269-37562598	K562	blood:	n/a	n/a
29	CBX3	chr5:37481486-37481876	K562	blood:	n/a	n/a
30	CBX3	chr5:37555007-37555383	K562	blood:	n/a	n/a
31	CBX3	chr5:37533780-37534384	HCT-116	colon:	n/a	n/a
32	CBX3	chr5:37481023-37481289	K562	blood:	n/a	n/a
33	CBX3	chr5:37471796-37472190	K562	blood:	n/a	n/a
34	CBX3	chr5:37554376-37554928	K562	blood:	n/a	n/a
35	CBX3	chr5:37488479-37488841	K562	blood:	n/a	n/a
36	CBX3	chr5:37453412-37453631	K562	blood:	n/a	n/a
37	CBX3	chr5:37554404-37554794	K562	blood:	n/a	n/a
38	CBX3	chr5:37553262-37553704	K562	blood:	n/a	n/a
39	CBX3	chr5:37480974-37481326	K562	blood:	n/a	n/a
40	CBX3	chr5:37552855-37554275	K562	blood:	n/a	n/a
41	CCNT2	chr5:37596886-37596997	K562	blood:	n/a	n/a
42	CCNT2	chr5:37564956-37565143	K562	blood:	n/a	n/a
43	CCNT2	chr5:37576226-37576595	K562	blood:	n/a	n/a
44	CCNT2	chr5:37636623-37636766	K562	blood:	n/a	n/a
45	CCNT2	chr5:37552835-37553716	K562	blood:	n/a	chr5:37553445-37553465
46	CEBPB	chr5:37436662-37436977	HepG2	liver:	n/a	chr5:37436833-37436844 chr5:37436832-37436845
47	CEBPB	chr5:37566085-37566208	Hela-S3	cervix:	n/a	n/a
48	CEBPB	chr5:37481844-37481867	HepG2	liver:	n/a	n/a
49	CEBPB	chr5:37493291-37493471	A549	lung:	n/a	n/a
50	CEBPB	chr5:37619693-37619926	K562	blood:	n/a	chr5:37619776-37619787

(count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr5:37638144-37638194	GM12891	blood:	n/a
2	chr5:37484025-37484075	HEK293	kidney:	embryo
3	chr5:37484025-37484075	HCPEpiC	choroid plexus:	n/a
4	chr5:37484025-37484075	SK-N-MC	brain:	n/a
5	chr5:37484025-37484075	NB4	blood:	n/a
6	chr5:37484025-37484075	HCF	heart:	n/a
7	chr5:37638144-37638194	GM19239	blood:	n/a
8	chr5:37638144-37638194	RPTEC	kidney:	n/a
9	chr5:37484025-37484075	HRPEpiC	eye:	n/a
10	chr5:37638144-37638194	HAEpiC	amniotic membrane:	n/a
11	chr5:37638144-37638194	BJ	skin:	n/a
12	chr5:37638144-37638194	Hepatocyte	liver:	n/a
13	chr5:37484025-37484075	BE2_C	brain:	n/a
14	chr5:37638144-37638194	AG10803	skin:	n/a
15	chr5:37638144-37638194	U87	brain:	n/a
16	chr5:37484025-37484075	MCF10A-Er-Src	breast:	n/a
17	chr5:37638144-37638194	HCPEpiC	choroid plexus:	n/a
18	chr5:37638144-37638194	CMK	blood:	n/a
19	chr5:37638144-37638194	AG04450	lung:	fetal
20	chr5:37484025-37484075	K562	blood:	n/a
21	chr5:37484025-37484075	Hepatocyte	liver:	n/a
22	chr5:37638144-37638194	HL-60	blood:	n/a
23	chr5:37484025-37484075	HUVEC	blood vessel:	n/a
24	chr5:37638144-37638194	K562	blood:	n/a
25	chr5:37484025-37484075	SK-N-SH	brain:	n/a
26	chr5:37638144-37638194	T-47D	breast:	n/a
27	chr5:37638144-37638194	NH-A	brain:	n/a
28	chr5:37638144-37638194	HepG2	liver:	n/a
29	chr5:37638144-37638194	MCF10A-Er-Src	breast:	n/a
30	chr5:37484025-37484075	HRE	kidney:	n/a
31	chr5:37484025-37484075	PFSK-1	brain:	n/a
32	chr5:37484025-37484075	AG04450	lung:	fetal
33	chr5:37484025-37484075	HepG2	liver:	n/a
34	chr5:37484025-37484075	NHBE	bronchial:	n/a
35	chr5:37484025-37484075	AoSMC	blood vessel:	n/a
36	chr5:37638144-37638194	SKMC	muscle:	n/a
37	chr5:37484025-37484075	CMK	blood:	n/a
38	chr5:37638144-37638194	HCT-116	colon:	n/a
39	chr5:37484025-37484075	HIPEpiC	eye:	n/a
40	chr5:37638144-37638194	HRE	kidney:	n/a
41	chr5:37484025-37484075	RPTEC	kidney:	n/a
42	chr5:37484025-37484075	PrEC	prostate:	n/a
43	chr5:37484025-37484075	A549	lung:	n/a
44	chr5:37484025-37484075	IMR90	lung:	fetal
45	chr5:37638144-37638194	GM12878	blood:	n/a
46	chr5:37484025-37484075	GM12891	blood:	n/a
47	chr5:37638144-37638194	AG09309	skin:	n/a
48	chr5:37638144-37638194	SK-N-SH	brain:	n/a
49	chr5:37484025-37484075	HCM	heart:	n/a
50	chr5:37638144-37638194	NT2-D1	testis:	n/a

(count:90 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr5:37543508..37545182-chr5:37552537..37554107,2	K562	blood:
2	chr5:37574620..37576476-chr5:37584938..37587005,2	K562	blood:
3	chr5:37496762..37498368-chr5:37500019..37501730,2	MCF-7	breast:
4	chr5:37423699..37426165-chr5:37428640..37431370,2	MCF-7	breast:
5	chr5:37395673..37397370-chr5:37410862..37413241,2	MCF-7	breast:
6	chr5:37495049..37495731-chr5:37758036..37758591,2	MCF-7	breast:
7	chr5:37628723..37630359-chr5:37632589..37634816,2	K562	blood:
8	chr5:37609718..37612103-chr5:37614733..37616548,2	K562	blood:
9	chr10:132633168..132634098-chr5:37613234..37613734,2	NB4	blood:
10	chr5:37539872..37542556-chr5:37548847..37552617,3	K562	blood:
11	chr5:37536707..37538331-chr5:37538401..37541156,2	K562	blood:
12	chr5:37423699..37426165-chr5:37428640..37431370,2	MCF-7	breast:
13	chr5:37659630..37663695-chr5:37665450..37669812,5	K562	blood:
14	chr5:37595713..37598522-chr5:37598796..37602630,3	MCF-7	breast:
15	chr5:37574620..37576476-chr5:37584938..37587005,2	K562	blood:
16	chr5:37412852..37413708-chr5:37554717..37555628,3	MCF-7	breast:
17	chr5:37550616..37553710-chr5:37559318..37562633,4	K562	blood:
18	chr5:37412825..37413381-chr5:37926629..37927147,2	MCF-7	breast:
19	chr5:37509914..37511896-chr5:37518755..37521412,2	K562	blood:
20	chr5:37412788..37413557-chr5:38023669..38024455,2	MCF-7	breast:
21	chr5:37495029..37495917-chr5:37837475..37838072,2	MCF-7	breast:
22	chr5:37576360..37578315-chr5:37581420..37583139,2	K562	blood:
23	chr5:37378807..37379355-chr5:37554382..37555285,2	K562	blood:
24	chr5:37569124..37569718-chr8:118852447..118853416,2	MCF-7	breast:
25	chr5:37659630..37663695-chr5:37665450..37669812,5	K562	blood:
26	chr5:37609718..37612103-chr5:37614733..37616548,2	K562	blood:
27	chr5:37412852..37413708-chr5:37554717..37555628,3	MCF-7	breast:
28	chr5:37503334..37505446-chr5:37509179..37510910,2	K562	blood:
29	chr5:37583782..37585545-chr5:37586859..37589248,2	K562	blood:
30	chr5:37551924..37555267-chr5:37556271..37558320,3	K562	blood:
31	chr5:37536707..37538331-chr5:37538401..37541156,2	K562	blood:
32	chr17:61358570..61359089-chr5:37412803..37413392,2	MCF-7	breast:
33	chr5:37559780..37563110-chr5:37563759..37567373,3	K562	blood:
34	chr5:37550616..37553710-chr5:37559318..37562633,4	K562	blood:
35	chr5:37412738..37413377-chr5:38194610..38195311,2	MCF-7	breast:
36	chr5:37541266..37543534-chr5:37545440..37547559,2	K562	blood:
37	chr5:37438128..37441611-chr5:37451601..37454118,3	K562	blood:
38	chr5:37402668..37405027-chr5:37408741..37410429,2	K562	blood:
39	chr5:37477675..37480288-chr5:37486843..37489829,2	K562	blood:
40	chr5:37543508..37545182-chr5:37552537..37554107,2	K562	blood:
41	chr5:37658934..37661849-chr5:37667178..37669216,3	MCF-7	breast:
42	chr5:37413098..37413750-chr5:37837537..37838115,2	MCF-7	breast:
43	chr5:37412783..37413436-chr5:37723453..37724202,2	K562	blood:
44	chr5:37576360..37578315-chr5:37581420..37583139,2	K562	blood:
45	chr5:37413110..37413637-chr5:37840070..37840640,2	MCF-7	breast:
46	chr5:37440538..37443537-chr5:37502324..37504824,2	K562	blood:
47	chr5:37595713..37598522-chr5:37598796..37602630,3	MCF-7	breast:
48	chr5:37569701..37572288-chr5:37579867..37582083,2	MCF-7	breast:
49	chr5:37488881..37490858-chr5:37567347..37569058,2	K562	blood:
50	chr5:37550784..37553523-chr5:37560304..37561961,2	MCF-7	breast:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-NUP155-5	chr5:37505790-37506959	NONHSAT101066

No data

Variant related genes	Relation type
RNU6-1190P	TF binding region
WDR70	TF binding region
ENSG00000248216	TF binding region
RNU6-1190P	CpG island
WDR70	CpG island
ENSG00000248216	CpG island
ENSG00000248587	chromatin interactions
ENSG00000082068	chromatin interactions

Extended variants
information (count: 9453 )
Associated
traits (count: 106 )

Variant overlapped rSNPs/rCNVs (count:9453 , 50 per page) page: 1 2 3 4 5 6 7 ... 190

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs544903498	chr5:37406860-37406861	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs11364382	chr5:37406863-37406864	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs200118809	chr5:37406864-37406865	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs565046041	chr5:37406869-37406870	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs187927495	chr5:37406881-37406882	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs554148643	chr5:37406892-37406893	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs142486757	chr5:37406901-37406902	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs190499993	chr5:37406926-37406927	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs564847256	chr5:37406950-37406951	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs73749029	chr5:37406955-37406956	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs543933420	chr5:37407030-37407031	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs10067278	chr5:37407043-37407044	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
13	rs143234392	chr5:37407063-37407064	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs182902868	chr5:37407067-37407068	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs151237622	chr5:37407081-37407082	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs527551472	chr5:37407088-37407089	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs552155159	chr5:37407151-37407152	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs570470257	chr5:37407180-37407181	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs538374953	chr5:37407189-37407190	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs550003485	chr5:37407233-37407234	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs535541743	chr5:37407322-37407323	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs140447931	chr5:37407348-37407349	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs535657075	chr5:37407454-37407455	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs34682664	chr5:37407463-37407464	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs554373129	chr5:37407473-37407474	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs572799324	chr5:37407529-37407530	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs540092398	chr5:37407551-37407552	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs186864062	chr5:37407569-37407570	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs571968611	chr5:37407570-37407571	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs536473017	chr5:37407600-37407601	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs11436081	chr5:37407604-37407605	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs397973278	chr5:37407605-37407606	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs192946474	chr5:37407653-37407654	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs534340058	chr5:37407665-37407666	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs184198858	chr5:37407677-37407678	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs529701563	chr5:37407769-37407770	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs555966116	chr5:37407771-37407772	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs574436231	chr5:37407819-37407820	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs541677515	chr5:37407820-37407821	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs199633038	chr5:37407837-37407838	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs4869429	chr5:37407879-37407880	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs187781913	chr5:37407934-37407935	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs545682397	chr5:37407960-37407961	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs564186197	chr5:37407991-37407992	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs192482061	chr5:37408026-37408027	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs550290323	chr5:37408054-37408055	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs568471454	chr5:37408103-37408104	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs10058009	chr5:37408110-37408111	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
49	rs548030791	chr5:37408182-37408183	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs150369227	chr5:37408194-37408195	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:106)

Disease	PMID	Source
Myofibroblastic sarcoma	19369631	CNVD
Cervical squamous cell carcinoma	21590768	CNVD
Non-small cell lung cancer	20864512	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	16783165	CNVD
Thyroid cancer	19087340	CNVD
Liposarcoma	21253554	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Cervical Cancer	21857958	CNVD
Cervical cancer	21062161	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	19960244	CNVD
Oral cancer	21386901	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Ewing''s sarcoma	17952124	CNVD
Malignant mesothelioma	18160781	CNVD
Pleural malignant mesothelioma	18160781	CNVD
Cervical cancer	18559093	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Metanephric adenoma	20802469	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Medulloblastoma	21979893	CNVD
Phyllodes tumor	17334353	CNVD
Malaria	21533027	CNVD
Renal cell carcinoma	19461508	CNVD
Colorectal cancer	21645411	CNVD
Gastric cancer	22152101	CNVD
Oesophago-gastric ulcer	22152101	CNVD
Ovarian cancer	21781307	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Cancer	20164919	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Multiple myeloma	17550852	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Bladder cancer	21909424	CNVD
DNA damage stimulus	22844521	CNVD
DNA repair	22844521	CNVD
Breast cancer	21785460	CNVD
Spinal muscular atrophy	22422766	CNVD
Spinal muscular atrophy	22558076	CNVD
Spinal muscular atrophy	21320981	CNVD
Spinal muscular atrophy	21762474	CNVD
Breast cancer	21858162	CNVD
Esophageal adenocarcinoma	19417022	CNVD
Cancer	16751803	CNVD
Breast cancer	16608533	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Non-syndromic sensorineural hearing loss	20606397	CNVD
Intellectual disability	22102821	CNVD
Prostate cancer	21965145	CNVD
Cancer	21183584	CNVD
Ovarian cancer	20844748	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Breast cancer	17603634	CNVD
Non-small cell lung cancer	19010865	CNVD
Glioblastoma multiforme	22286061	CNVD
Ovarian cancer	21720365	CNVD
Lung cancer	18438408	CNVD
Glioma	20126413	CNVD
Non-small cell lung cancer	21829676	CNVD
Breast cancer	22032731	CNVD
Esophageal cancer	20955586	CNVD
Prostate cancer	18632612	CNVD
Medulloblastoma	19270706	CNVD
Breast cancer	19553991	CNVD
Lung cancer	19553991	CNVD
Melanoma	19553991	CNVD
Ovarian cancer	19553991	CNVD
Prostate cancer	19553991	CNVD
Non-small cell lung cancer	17156491	CNVD
Breast cancer	17133270	CNVD
Congenital anomalies of the kidney and urinary tract	18694510	CNVD
Breast cancer	17393978	CNVD
Pleomorphic liposarcoma	18784837	CNVD
Acute lymphoblastic leukemia	17640729	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
Lung cancer	19153074	CNVD
Cornelia de Lange syndrome	21085971	CNVD
Autism	21701786	CNVD
Cervical cancer	16585170	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Hodgkin''s lymphoma	17606441	CNVD
small cell lung cancer	20016488	CNVD
Breast cancer	21364760	CNVD
Schizophrenia	23813976	CNVD
Schizophrenia	21346763	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	19212409	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Non-syndromic sensorineural hearing loss	19587683	CNVD
Breast cancer	21990379	CNVD
Schizophrenia	19197363	CNVD

Chromatin state (count:2905 , 50 per page) page: 1 2 3 4 5 6 7 ... 59

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:37379800-37434200	Weak transcription	Small Intestine	intestine
2	chr5:37379800-37444400	Weak transcription	Gastric	stomach
3	chr5:37380000-37427800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr5:37380000-37428200	Weak transcription	Stomach Mucosa	stomach
5	chr5:37380000-37443400	Weak transcription	Colonic Mucosa	Colon
6	chr5:37380200-37420400	Weak transcription	NHDF-Ad	bronchial
7	chr5:37380200-37432600	Weak transcription	Placenta Amnion	Placenta Amnion
8	chr5:37380200-37435000	Weak transcription	Rectal Smooth Muscle	rectum
9	chr5:37380200-37446800	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
10	chr5:37380200-37446800	Weak transcription	Fetal Brain Male	brain
11	chr5:37380200-37451200	Weak transcription	Right Ventricle	heart
12	chr5:37380400-37434800	Weak transcription	NHLF	lung
13	chr5:37389800-37420000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr5:37390200-37428600	Weak transcription	HMEC	breast
15	chr5:37391000-37411600	Strong transcription	Primary T helper cells fromperipheralblood	blood
16	chr5:37392200-37410600	Strong transcription	Adipose Nuclei	Adipose
17	chr5:37393200-37416800	Weak transcription	NHEK	skin
18	chr5:37393200-37419000	Weak transcription	HUVEC	blood vessel
19	chr5:37393200-37427200	Weak transcription	Esophagus	oesophagus
20	chr5:37393200-37451400	Weak transcription	Pancreas	Pancrea
21	chr5:37393400-37409600	Weak transcription	Aorta	Aorta
22	chr5:37394800-37431800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
23	chr5:37395000-37428800	Weak transcription	HUES6 Cell Line	embryonic stem cell
24	chr5:37395400-37447000	Weak transcription	Brain Inferior Temporal Lobe	brain
25	chr5:37396200-37426000	Weak transcription	Primary hematopoietic stem cells	blood
26	chr5:37396200-37429000	Weak transcription	Brain Cingulate Gyrus	brain
27	chr5:37396400-37427200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
28	chr5:37396600-37424400	Weak transcription	Fetal Lung	lung
29	chr5:37396800-37454600	Weak transcription	A549	lung
30	chr5:37397000-37407600	Weak transcription	H1 Cell Line	embryonic stem cell
31	chr5:37397000-37412600	Weak transcription	Skeletal Muscle Female	skeletal muscle
32	chr5:37397200-37416800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
33	chr5:37397200-37417400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
34	chr5:37397200-37417400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
35	chr5:37397200-37419000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
36	chr5:37397200-37425200	Weak transcription	Spleen	Spleen
37	chr5:37397200-37446600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
38	chr5:37397400-37413000	Strong transcription	Monocytes-CD14+_RO01746	blood
39	chr5:37397600-37409400	Weak transcription	Cortex derived primary cultured neurospheres	brain
40	chr5:37397600-37410400	Weak transcription	Muscle Satellite Cultured Cells	--
41	chr5:37397600-37411600	Strong transcription	Primary monocytes fromperipheralblood	blood
42	chr5:37397600-37424200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
43	chr5:37397600-37426000	Weak transcription	Ovary	ovary
44	chr5:37397800-37409400	Weak transcription	Fetal Brain Female	brain
45	chr5:37398000-37424400	Weak transcription	Skeletal Muscle Male	skeletal muscle
46	chr5:37398400-37417400	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
47	chr5:37398600-37423800	Weak transcription	Lung	lung
48	chr5:37398800-37409400	Weak transcription	Left Ventricle	heart
49	chr5:37399800-37417000	Weak transcription	Brain Germinal Matrix	brain
50	chr5:37400600-37408400	Strong transcription	Fetal Intestine Large	intestine

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links