Variant report

Variant	nsv1034139
Chromosome Location	chr6:57192993-57253423
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr6:57236576-57237274	HepG2	liver:	n/a	n/a
2	BACH1	chr6:57228847-57228853	K562	blood:	n/a	n/a
3	BATF	chr6:57215182-57215534	GM12878	blood:	n/a	n/a
4	BATF	chr6:57213914-57214212	GM12878	blood:	n/a	n/a
5	BRCA1	chr6:57249520-57249524	GM12878	blood:	n/a	n/a
6	BRCA1	chr6:57229139-57229210	GM12878	blood:	n/a	n/a
7	CCNT2	chr6:57249858-57249985	K562	blood:	n/a	n/a
8	CEBPB	chr6:57192929-57193220	A549	lung:	n/a	chr6:57193068-57193079
9	CEBPB	chr6:57211486-57211911	ECC-1	luminal epithelium:	n/a	chr6:57211674-57211683 chr6:57211672-57211685 chr6:57211674-57211683 chr6:57211674-57211683
10	CEBPB	chr6:57211512-57211813	HepG2	liver:	n/a	chr6:57211674-57211683 chr6:57211672-57211685 chr6:57211674-57211683 chr6:57211674-57211683
11	CEBPB	chr6:57211584-57211723	K562	blood:	n/a	chr6:57211674-57211683 chr6:57211672-57211685 chr6:57211674-57211683 chr6:57211674-57211683
12	CEBPB	chr6:57232651-57232929	HepG2	liver:	n/a	n/a
13	CEBPB	chr6:57211454-57211896	MCF-7	breast:	n/a	chr6:57211674-57211683 chr6:57211672-57211685 chr6:57211674-57211683 chr6:57211674-57211683
14	CEBPB	chr6:57211488-57211863	A549	lung:	n/a	chr6:57211674-57211683 chr6:57211672-57211685 chr6:57211674-57211683 chr6:57211674-57211683
15	CEBPB	chr6:57223711-57223972	K562	blood:	n/a	chr6:57223813-57223824
16	CEBPB	chr6:57192908-57193243	HepG2	liver:	n/a	chr6:57193068-57193079
17	CEBPB	chr6:57192903-57193201	Hela-S3	cervix:	n/a	chr6:57193068-57193079
18	CEBPB	chr6:57211487-57211869	HepG2	liver:	n/a	chr6:57211674-57211683 chr6:57211672-57211685 chr6:57211674-57211683 chr6:57211674-57211683
19	CEBPB	chr6:57211490-57211859	K562	blood:	n/a	chr6:57211674-57211683 chr6:57211672-57211685 chr6:57211674-57211683 chr6:57211674-57211683
20	CEBPB	chr6:57192919-57193256	K562	blood:	n/a	chr6:57193068-57193079
21	CEBPB	chr6:57192904-57193252	IMR90	lung:	n/a	chr6:57193068-57193079
22	CEBPB	chr6:57236682-57236968	HepG2	liver:	n/a	chr6:57236826-57236839 chr6:57236826-57236837
23	CEBPB	chr6:57214235-57214518	HepG2	liver:	n/a	chr6:57214339-57214350
24	CEBPB	chr6:57223734-57223931	H1-hESC	embryonic stem cell:	n/a	chr6:57223813-57223824
25	CEBPB	chr6:57211500-57211865	Hela-S3	cervix:	n/a	chr6:57211674-57211683 chr6:57211672-57211685 chr6:57211674-57211683 chr6:57211674-57211683
26	CEBPB	chr6:57211476-57211812	K562	blood:	n/a	chr6:57211674-57211683 chr6:57211672-57211685 chr6:57211674-57211683 chr6:57211674-57211683
27	CEBPB	chr6:57211403-57211997	HCT-116	colon:	n/a	chr6:57211674-57211683 chr6:57211672-57211685 chr6:57211674-57211683 chr6:57211674-57211683
28	CEBPB	chr6:57211486-57211928	H1-hESC	embryonic stem cell:	n/a	chr6:57211674-57211683 chr6:57211672-57211685 chr6:57211674-57211683 chr6:57211674-57211683
29	CEBPB	chr6:57223675-57223974	HepG2	liver:	n/a	chr6:57223813-57223824
30	CEBPB	chr6:57214294-57214502	A549	lung:	n/a	chr6:57214339-57214350
31	CEBPB	chr6:57211493-57211867	IMR90	lung:	n/a	chr6:57211674-57211683 chr6:57211672-57211685 chr6:57211674-57211683 chr6:57211674-57211683
32	CEBPB	chr6:57211545-57211898	ECC-1	luminal epithelium:	n/a	chr6:57211674-57211683 chr6:57211672-57211685 chr6:57211674-57211683 chr6:57211674-57211683
33	CEBPB	chr6:57211504-57211884	HepG2	liver:	n/a	chr6:57211674-57211683 chr6:57211672-57211685 chr6:57211674-57211683 chr6:57211674-57211683
34	CEBPB	chr6:57236559-57237098	MCF-7	breast:	n/a	chr6:57236826-57236839 chr6:57236826-57236837
35	CEBPB	chr6:57211522-57211871	A549	lung:	n/a	chr6:57211674-57211683 chr6:57211672-57211685 chr6:57211674-57211683 chr6:57211674-57211683
36	CEBPB	chr6:57211491-57211862	HepG2	liver:	n/a	chr6:57211674-57211683 chr6:57211672-57211685 chr6:57211674-57211683 chr6:57211674-57211683
37	CEBPB	chr6:57223683-57223972	IMR90	lung:	n/a	chr6:57223813-57223824
38	CEBPZ	chr6:57248289-57248300	HepG2	liver:	n/a	n/a
39	CEBPZ	chr6:57236482-57236860	HepG2	liver:	n/a	chr6:57236826-57236839
40	CHD2	chr6:57223824-57223983	HepG2	liver:	n/a	n/a
41	CTCF	chr6:57217506-57217659	LNCaP	prostate:	n/a	n/a
42	CTCF	chr6:57217560-57217710	WI-38	lung:	n/a	n/a
43	CTCF	chr6:57217300-57217450	HAc	cerebellar:	n/a	n/a
44	CTCF	chr6:57217480-57217630	MCF-7	breast:	n/a	n/a
45	CTCF	chr6:57217489-57217597	SK-N-SH_RA	brain:	n/a	n/a
46	CTCF	chr6:57217531-57217629	GM13977	blood:	n/a	n/a
47	CTCF	chr6:57243920-57244070	HCM	heart:	n/a	n/a
48	CTCF	chr6:57217500-57217650	HA-sp	spinal cord:	n/a	n/a
49	CTCF	chr6:57216160-57216310	Caco-2	colon:	n/a	n/a
50	CTCF	chr6:57231369-57231372	MCF-7	breast:	n/a	n/a

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:57235407-57235457	HL-60	blood:	n/a
2	chr6:57218853-57218903	Hepatocyte	liver:	n/a
3	chr6:57235407-57235457	AG09309	skin:	n/a
4	chr6:57235407-57235457	GM12878	blood:	n/a
5	chr6:57218853-57218903	HL-60	blood:	n/a
6	chr6:57235407-57235457	A549	lung:	n/a
7	chr6:57218853-57218903	SK-N-SH_RA	brain:	n/a
8	chr6:57218853-57218903	HRCEpiC	kidney:	n/a
9	chr6:57245939-57245989	HUVEC	blood vessel:	n/a
10	chr6:57245939-57245989	CMK	blood:	n/a
11	chr6:57245939-57245989	ProgFib	skin:	n/a
12	chr6:57218853-57218903	AoSMC	blood vessel:	n/a
13	chr6:57235407-57235457	HIPEpiC	eye:	n/a
14	chr6:57235407-57235457	LNCaP	prostate:	n/a
15	chr6:57235407-57235457	CMK	blood:	n/a
16	chr6:57245939-57245989	HCPEpiC	choroid plexus:	n/a
17	chr6:57235407-57235457	SK-N-SH	brain:	n/a
18	chr6:57218853-57218903	HEEpiC	esophagus:	n/a
19	chr6:57235407-57235457	NHBE	bronchial:	n/a
20	chr6:57245939-57245989	SAEC	small airway:	n/a
21	chr6:57218853-57218903	ECC-1	luminal epithelium:	n/a
22	chr6:57235407-57235457	HepG2	liver:	n/a
23	chr6:57218853-57218903	HIPEpiC	eye:	n/a
24	chr6:57235407-57235457	Hela-S3	cervix:	n/a
25	chr6:57218853-57218903	Hela-S3	cervix:	n/a
26	chr6:57245939-57245989	SKMC	muscle:	n/a
27	chr6:57235407-57235457	PFSK-1	brain:	n/a
28	chr6:57245939-57245989	GM12878	blood:	n/a
29	chr6:57245939-57245989	MCF10A-Er-Src	breast:	n/a
30	chr6:57235407-57235457	SKMC	muscle:	n/a
31	chr6:57245939-57245989	AG09309	skin:	n/a
32	chr6:57245939-57245989	GM12891	blood:	n/a
33	chr6:57218853-57218903	CMK	blood:	n/a
34	chr6:57245939-57245989	NB4	blood:	n/a
35	chr6:57245939-57245989	Jurkat	blood:	n/a
36	chr6:57245939-57245989	SK-N-MC	brain:	n/a
37	chr6:57235407-57235457	AoSMC	blood vessel:	n/a
38	chr6:57245939-57245989	AoSMC	blood vessel:	n/a
39	chr6:57235407-57235457	HUVEC	blood vessel:	n/a
40	chr6:57245939-57245989	GM12892	blood:	n/a
41	chr6:57235407-57235457	SK-N-MC	brain:	n/a
42	chr6:57245939-57245989	U87	brain:	n/a
43	chr6:57245939-57245989	HEEpiC	esophagus:	n/a
44	chr6:57235407-57235457	T-47D	breast:	n/a
45	chr6:57218853-57218903	HCPEpiC	choroid plexus:	n/a
46	chr6:57235407-57235457	PANC-1	pancreas:	n/a
47	chr6:57245939-57245989	GM06990	blood:	n/a
48	chr6:57235407-57235457	HCF	heart:	n/a
49	chr6:57235407-57235457	HEK293	kidney:	embryo
50	chr6:57245939-57245989	Hela-S3	cervix:	n/a

No.	Distal block	Cell Line	Cell type
1	chr6:57217129..57218039-chr6:57539079..57539990,3	MCF-7	breast:
2	chr6:57214841..57217586-chr6:57224303..57226247,2	K562	blood:
3	chr6:57209967..57212539-chr6:57213014..57215856,3	MCF-7	breast:
4	chr6:57226391..57228337-chr6:57232279..57234513,2	K562	blood:
5	chr6:57209967..57212539-chr6:57213014..57215856,3	MCF-7	breast:
6	chr6:57198328..57200503-chr6:57228180..57229836,2	K562	blood:
7	chr6:57197771..57200072-chr6:57204216..57205882,2	K562	blood:
8	chr6:57232895..57235001-chr6:57373838..57375777,2	K562	blood:
9	chr6:57229138..57231697-chr6:57233407..57236328,3	K562	blood:
10	chr6:57197771..57200072-chr6:57204216..57205882,2	K562	blood:
11	chr6:57230388..57232358-chr6:57233911..57236761,3	MCF-7	breast:
12	chr6:57198328..57200503-chr6:57228180..57229836,2	K562	blood:
13	chr6:57225893..57228835-chr6:57230897..57233508,2	K562	blood:
14	chr6:57226391..57228337-chr6:57232279..57234513,2	K562	blood:
15	chr6:57244329..57246093-chr6:57248866..57250667,2	K562	blood:
16	chr6:57187827..57190385-chr6:57223942..57226286,2	MCF-7	breast:
17	chr6:57189628..57192491-chr6:57192735..57194263,2	K562	blood:
18	chr6:57230388..57232358-chr6:57233911..57236761,3	MCF-7	breast:
19	chr6:57225893..57228835-chr6:57230897..57233508,2	K562	blood:
20	chr6:57182975..57187891-chr6:57191602..57197743,6	K562	blood:
21	chr6:57214841..57217586-chr6:57224303..57226247,2	K562	blood:
22	chr6:57188094..57190184-chr6:57192296..57194436,2	MCF-7	breast:
23	chr6:57229138..57231697-chr6:57233407..57236328,3	K562	blood:
24	chr6:57184109..57185924-chr6:57191382..57194380,2	K562	blood:

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RAB23-9	chr6:57233281-57234474	ucscGeneNc_uc003pdu_1
2	lnc-RAB23-9	chr6:57236060-57236103	ucscGeneNc_uc003pdu_1
3	lnc-RAB23-9	chr6:57235203-57235424	ucscGeneNc_uc003pdu_1

Variant related genes	Relation type
MIR548U	TF binding region
PRIM2	TF binding region
MIR548U	CpG island
PRIM2	CpG island
ENSG00000146143	chromatin interactions

Extended variants
information (count: 2986 )
Associated
traits (count: 75 )

Variant overlapped rSNPs/rCNVs (count:2986 , 50 per page) page: 1 2 3 4 5 6 7 ... 60

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs368412865	chr6:57193002-57193003	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs112094161	chr6:57193035-57193036	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs371699559	chr6:57193052-57193053	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs375685363	chr6:57193110-57193111	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs554613904	chr6:57193116-57193117	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs527989000	chr6:57193138-57193139	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs549619936	chr6:57193167-57193168	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs561553683	chr6:57193168-57193169	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs376457197	chr6:57193228-57193229	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs369740197	chr6:57193229-57193230	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs528863181	chr6:57193234-57193235	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs550299059	chr6:57193300-57193301	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs568606023	chr6:57193363-57193364	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs4715655	chr6:57193366-57193367	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
15	rs28367021	chr6:57193411-57193412	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
16	rs566296586	chr6:57193466-57193467	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs533863859	chr6:57193468-57193469	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs558600775	chr6:57193478-57193479	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs555612012	chr6:57193492-57193493	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs150376171	chr6:57193504-57193505	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs28800513	chr6:57193524-57193525	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
22	rs556742448	chr6:57193555-57193556	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs370120673	chr6:57193559-57193560	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs187873487	chr6:57193591-57193592	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs373073237	chr6:57193609-57193610	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs78260590	chr6:57193610-57193611	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs572573463	chr6:57193676-57193677	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs542981876	chr6:57193742-57193743	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs561614951	chr6:57193749-57193750	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs528927216	chr6:57193816-57193817	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs145124663	chr6:57193839-57193840	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs565162950	chr6:57193843-57193844	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs549060707	chr6:57193847-57193848	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs201266779	chr6:57193926-57193927	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs554242555	chr6:57193928-57193929	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs532879241	chr6:57193941-57193942	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs551033336	chr6:57194040-57194041	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs4715656	chr6:57194050-57194051	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
39	rs533972134	chr6:57194052-57194053	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs9464434	chr6:57194078-57194079	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs4715657	chr6:57194118-57194119	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
42	rs538092112	chr6:57194148-57194149	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs556609636	chr6:57194171-57194172	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs192168272	chr6:57194179-57194180	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs539159989	chr6:57194202-57194203	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs554289188	chr6:57194221-57194222	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs572591235	chr6:57194311-57194312	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
48	rs543201210	chr6:57194317-57194318	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs554814834	chr6:57194357-57194358	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs111583900	chr6:57194423-57194424	ZNF genes & repeats Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:75)

Disease	PMID	Source
Leukemia	21518781	CNVD
Cancer	21637783	CNVD
Facial dysmorphism	22105932	CNVD
Medulloblastoma	21979893	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Diffuse large b-cell lymphoma	18287131	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Glioblastoma multiforme	19960244	CNVD
Glioblastoma multiforme	21080181	CNVD
Hepatocellular carcinoma	22174799	CNVD
Endometrial cancer	22040021	CNVD
Acute myeloid leukemia	16864856	CNVD
Breast cancer	21264507	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	16751803	CNVD
Bladder cancer	19088036	CNVD
Wilms tumour	21544195	CNVD
Uveal melanoma	21693616	CNVD
Biliary cancer	19435499	CNVD
Malaria	21533027	CNVD
Retinoblastoma	19183342	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	21858162	CNVD
Ewing''s sarcoma	17952124	CNVD
Autism	21448237	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Autism	22495311	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Urothelial carcinoma	18382360	CNVD
Cancer	21183584	CNVD
small cell lung cancer	20016488	CNVD
Gastric cancer	17908304	CNVD
Neuroblastoma	16790693	CNVD
T-cell prolymphocytic leukemia	17713554	CNVD
Biliary cancer	20360734	CNVD
Breast cancer	20360734	CNVD
Coronary artery disease	20360734	CNVD
Crohn''s disease	20360734	CNVD
Hypertension	20360734	CNVD
Rheumatoid arthritis	20360734	CNVD
Type 1 diabetes	20360734	CNVD
Type 2 diabetes	20360734	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Lung cancer	18438408	CNVD
Neuroblastoma	18923191	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	17603634	CNVD
Systemic lupus erythematosus	17503323	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Breast cancer	16608533	CNVD
Melanoma	18172304	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	22286061	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Colorectal cancer	16272173	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	18458336	CNVD
lymphocytic leukemia	21291569	CNVD
Breast cancer	21509527	CNVD
Acute lymphoblastic leukemia	17443227	CNVD
T-cell lymphomas	19863542	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Ovarian cancer	21781307	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:1158 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:57182800-57194200	Weak transcription	Small Intestine	intestine
2	chr6:57183000-57194200	Weak transcription	Pancreas	Pancrea
3	chr6:57183000-57194200	Weak transcription	Spleen	Spleen
4	chr6:57183000-57194400	Weak transcription	Brain Substantia Nigra	brain
5	chr6:57183000-57194600	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
6	chr6:57183000-57199400	Weak transcription	HSMMtube	muscle
7	chr6:57183200-57194400	Weak transcription	Psoas Muscle	Psoas
8	chr6:57183200-57199200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr6:57183800-57193400	Strong transcription	Monocytes-CD14+_RO01746	blood
10	chr6:57183800-57194200	Strong transcription	Fetal Thymus	thymus
11	chr6:57184000-57193200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
12	chr6:57184000-57194600	Strong transcription	Primary B cells from cord blood	blood
13	chr6:57184000-57195800	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
14	chr6:57184200-57194400	Weak transcription	Fetal Heart	heart
15	chr6:57184200-57201200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
16	chr6:57184400-57193600	Strong transcription	Primary T cells from cord blood	blood
17	chr6:57184600-57194400	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
18	chr6:57184600-57196000	Strong transcription	Primary T helper cells fromperipheralblood	blood
19	chr6:57184600-57196200	Strong transcription	HUES48 Cell Line	embryonic stem cell
20	chr6:57184600-57199200	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
21	chr6:57184800-57194400	Strong transcription	HepG2	liver
22	chr6:57184800-57194800	Strong transcription	Rectal Mucosa Donor 31	rectum
23	chr6:57184800-57199600	Strong transcription	HSMM	muscle
24	chr6:57185000-57195000	Strong transcription	Primary monocytes fromperipheralblood	blood
25	chr6:57185200-57194400	Strong transcription	Primary T helper cells PMA-I stimulated	--
26	chr6:57185200-57195800	Strong transcription	Osteobl	bone
27	chr6:57186000-57194200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
28	chr6:57186400-57194000	Weak transcription	Brain Cingulate Gyrus	brain
29	chr6:57186400-57194200	Weak transcription	Right Ventricle	heart
30	chr6:57187400-57193000	Strong transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
31	chr6:57187400-57196600	Strong transcription	Primary T regulatory cells fromperipheralblood	blood
32	chr6:57188800-57194800	Strong transcription	Muscle Satellite Cultured Cells	--
33	chr6:57189400-57195200	Strong transcription	Hela-S3	cervix
34	chr6:57189800-57193000	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
35	chr6:57189800-57194600	Strong transcription	Fetal Intestine Large	intestine
36	chr6:57190000-57193000	Strong transcription	Fetal Intestine Small	intestine
37	chr6:57190000-57193400	Strong transcription	Fetal Muscle Trunk	muscle
38	chr6:57190000-57193600	Strong transcription	Fetal Adrenal Gland	Adrenal Gland
39	chr6:57190000-57194200	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
40	chr6:57190000-57194200	Strong transcription	Adipose Nuclei	Adipose
41	chr6:57190000-57195000	Strong transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
42	chr6:57190000-57195000	Strong transcription	Stomach Smooth Muscle	stomach
43	chr6:57190000-57199800	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
44	chr6:57190000-57200000	Strong transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
45	chr6:57190200-57194000	Strong transcription	Skeletal Muscle Male	skeletal muscle
46	chr6:57190200-57194200	Strong transcription	Duodenum Mucosa	Duodenum
47	chr6:57190200-57194600	Strong transcription	iPS DF 6.9 Cell Line	embryonic stem cell
48	chr6:57190200-57194600	Strong transcription	Foreskin Fibroblast Primary Cells skin02	Skin
49	chr6:57190200-57194800	Strong transcription	Primary T cells fromperipheralblood	blood
50	chr6:57190200-57194800	Strong transcription	Rectal Mucosa Donor 29	rectum

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