Variant report

Variant nsv1034208
Chromosome Location chr5:42119128-42290759
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:42119400-42120000 Enhancers Brain Germinal Matrix brain
2 chr5:42123000-42123600 Enhancers Adipose Nuclei Adipose
3 chr5:42131200-42131600 Enhancers H1 Cell Line embryonic stem cell
4 chr5:42131200-42132400 Enhancers Fetal Muscle Trunk muscle
5 chr5:42131200-42132400 Enhancers Fetal Muscle Leg muscle
6 chr5:42131400-42131800 Enhancers iPS-15b Cell Line embryonic stem cell
7 chr5:42149000-42149800 ZNF genes & repeats Liver Liver
8 chr5:42149000-42150000 ZNF genes & repeats Adipose Nuclei Adipose
9 chr5:42149200-42150400 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
10 chr5:42149400-42150200 ZNF genes & repeats H1 Cell Line embryonic stem cell
11 chr5:42152200-42152600 Enhancers Adipose Nuclei Adipose
12 chr5:42152200-42152800 Enhancers Fetal Heart heart
13 chr5:42152600-42158400 Weak transcription Adipose Nuclei Adipose
14 chr5:42152800-42156600 Weak transcription Fetal Heart heart
15 chr5:42153000-42153400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr5:42153400-42158400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr5:42156400-42157600 Enhancers Breast Myoepithelial Primary Cells Breast
18 chr5:42156600-42157600 Enhancers Fetal Heart heart
19 chr5:42156800-42157400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr5:42156800-42157400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr5:42156800-42157600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr5:42157200-42157600 Enhancers NHEK skin
23 chr5:42157600-42158000 Weak transcription Fetal Heart heart
24 chr5:42158000-42159000 Enhancers Fetal Heart heart
25 chr5:42158400-42158600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr5:42158400-42158800 Strong transcription Adipose Nuclei Adipose
27 chr5:42158800-42161000 Weak transcription Adipose Nuclei Adipose
28 chr5:42168200-42168800 Enhancers H1 Cell Line embryonic stem cell
29 chr5:42168400-42168800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr5:42168400-42168800 Enhancers HUES6 Cell Line embryonic stem cell
31 chr5:42168400-42168800 Enhancers Esophagus oesophagus
32 chr5:42168400-42169000 Enhancers iPS-18 Cell Line embryonic stem cell
33 chr5:42168400-42169200 Enhancers HUES64 Cell Line embryonic stem cell
34 chr5:42168600-42169200 Enhancers HUES48 Cell Line embryonic stem cell
35 chr5:42173800-42175200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr5:42173800-42175400 Active TSS Adipose Nuclei Adipose
37 chr5:42175200-42175400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr5:42175200-42176400 Enhancers Ovary ovary
39 chr5:42175400-42175800 Weak transcription Adipose Nuclei Adipose
40 chr5:42175400-42177000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr5:42175800-42177000 Enhancers Adipose Nuclei Adipose
42 chr5:42177400-42177800 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
43 chr5:42182800-42183000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
44 chr5:42189800-42190200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
45 chr5:42218000-42218200 Enhancers Adipose Nuclei Adipose
46 chr5:42218200-42218800 Weak transcription Adipose Nuclei Adipose
47 chr5:42218200-42219400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr5:42218600-42219400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr5:42218600-42219400 Enhancers Breast Myoepithelial Primary Cells Breast
50 chr5:42218800-42219400 Enhancers Adipose Nuclei Adipose

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