Variant report
Variant | nsv1034704 |
---|---|
Chromosome Location | chr5:27324221-27410790 |
allele | n/a |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr5:27316800-27329600 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
2 | chr5:27326000-27326200 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
3 | chr5:27326200-27328400 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
4 | chr5:27328400-27329000 | Enhancers | HMEC | breast |
5 | chr5:27328400-27329200 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
6 | chr5:27328400-27329200 | Enhancers | Muscle Satellite Cultured Cells | -- |
7 | chr5:27328600-27329200 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
8 | chr5:27328600-27329200 | Enhancers | NHEK | skin |
9 | chr5:27328800-27329200 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
10 | chr5:27329600-27330400 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
11 | chr5:27330400-27343800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
12 | chr5:27341200-27341800 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
13 | chr5:27341400-27341800 | Enhancers | Fetal Kidney | kidney |
14 | chr5:27341600-27342000 | Enhancers | HUES48 Cell Line | embryonic stem cell |
15 | chr5:27341800-27342800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
16 | chr5:27342400-27343000 | Enhancers | HUES64 Cell Line | embryonic stem cell |
17 | chr5:27342800-27343000 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
18 | chr5:27371200-27371600 | Enhancers | Esophagus | oesophagus |
19 | chr5:27377800-27378400 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
20 | chr5:27378000-27378400 | Enhancers | Placenta Amnion | Placenta Amnion |
21 | chr5:27387000-27389200 | Enhancers | HepG2 | liver |
22 | chr5:27387400-27388200 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
23 | chr5:27387600-27388000 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
24 | chr5:27387600-27388200 | Enhancers | HUES48 Cell Line | embryonic stem cell |
25 | chr5:27387600-27388200 | Enhancers | HUES64 Cell Line | embryonic stem cell |
26 | chr5:27387600-27388200 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
27 | chr5:27387600-27388200 | Enhancers | iPS-20b Cell Line | embryonic stem cell |
28 | chr5:27387600-27388800 | Enhancers | HUES6 Cell Line | embryonic stem cell |
29 | chr5:27388200-27389800 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
30 | chr5:27388600-27389800 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
31 | chr5:27388800-27389800 | Weak transcription | HUES6 Cell Line | embryonic stem cell |
32 | chr5:27389200-27389600 | Weak transcription | HepG2 | liver |
33 | chr5:27389600-27390000 | Enhancers | HepG2 | liver |
34 | chr5:27389800-27390000 | Enhancers | HUES6 Cell Line | embryonic stem cell |
35 | chr5:27389800-27390200 | Enhancers | HUES48 Cell Line | embryonic stem cell |
36 | chr5:27392000-27393400 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
37 | chr5:27392400-27393600 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
38 | chr5:27402600-27404200 | Active TSS | A549 | lung |
39 | chr5:27403000-27403200 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
40 | chr5:27403000-27403200 | Enhancers | Hela-S3 | cervix |
41 | chr5:27403200-27403800 | Active TSS | Hela-S3 | cervix |
42 | chr5:27403200-27404000 | Active TSS | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
43 | chr5:27403400-27403800 | Active TSS | IMR90 fetal lung fibroblasts Cell Line | lung |
44 | chr5:27403400-27403800 | Active TSS | Fetal Muscle Leg | muscle |
45 | chr5:27403400-27404000 | Active TSS | HMEC | breast |
46 | chr5:27403400-27404000 | Active TSS | Osteobl | bone |
47 | chr5:27403400-27404200 | Active TSS | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
48 | chr5:27403600-27404000 | Active TSS | Pancreatic Islets | Pancreatic Islet |
49 | chr5:27410400-27411000 | Enhancers | H9 Derived Neuron Cultured Cells | ES cell derived |