Variant report
Variant | nsv1035061 |
---|---|
Chromosome Location | chr8:11861797-12552839 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:5825)
- CpG islands (count:6657)
- Chromatin interactive region (count:6)
- LncRNA region (count:102)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr8:12433133-12433253 | K562 | blood: | n/a | n/a |
2 | ARID3A | chr8:11872669-11872691 | HepG2 | liver: | n/a | n/a |
3 | ARID3A | chr8:12051904-12051921 | HepG2 | liver: | n/a | n/a |
4 | ATF1 | chr8:12417563-12417956 | K562 | blood: | n/a | n/a |
5 | ATF1 | chr8:12435183-12435242 | K562 | blood: | n/a | n/a |
6 | ATF1 | chr8:12051725-12051925 | K562 | blood: | n/a | n/a |
7 | ATF1 | chr8:12400593-12400794 | K562 | blood: | n/a | n/a |
8 | ATF1 | chr8:12307263-12307299 | K562 | blood: | n/a | n/a |
9 | ATF1 | chr8:12420358-12420412 | K562 | blood: | n/a | n/a |
10 | ATF2 | chr8:12400598-12400937 | GM12878 | blood: | n/a | n/a |
11 | ATF2 | chr8:12444570-12445312 | GM12878 | blood: | n/a | n/a |
12 | ATF2 | chr8:12445730-12446477 | H1-hESC | embryonic stem cell: | n/a | n/a |
13 | ATF2 | chr8:12444691-12445512 | GM12878 | blood: | n/a | n/a |
14 | ATF2 | chr8:12400579-12400848 | GM12878 | blood: | n/a | n/a |
15 | BACH1 | chr8:12523030-12523230 | H1-hESC | embryonic stem cell: | n/a | n/a |
16 | BACH1 | chr8:12415419-12415446 | K562 | blood: | n/a | n/a |
17 | BATF | chr8:12374697-12374930 | GM12878 | blood: | n/a | n/a |
18 | BATF | chr8:12037531-12037813 | GM12878 | blood: | n/a | n/a |
19 | BATF | chr8:12211595-12212020 | GM12878 | blood: | n/a | n/a |
20 | BATF | chr8:12516917-12517140 | GM12878 | blood: | n/a | n/a |
21 | BATF | chr8:12277768-12278106 | GM12878 | blood: | n/a | n/a |
22 | BATF | chr8:12294490-12294715 | GM12878 | blood: | n/a | n/a |
23 | BATF | chr8:11970251-11970426 | GM12878 | blood: | n/a | chr8:11970334-11970345 |
24 | BATF | chr8:12288337-12288636 | GM12878 | blood: | n/a | n/a |
25 | BATF | chr8:12035447-12035785 | GM12878 | blood: | n/a | n/a |
26 | BATF | chr8:12052217-12052442 | GM12878 | blood: | n/a | n/a |
27 | BATF | chr8:12379045-12379257 | GM12878 | blood: | n/a | n/a |
28 | BATF | chr8:11970194-11970485 | GM12878 | blood: | n/a | chr8:11970334-11970345 |
29 | BATF | chr8:12400588-12400876 | GM12878 | blood: | n/a | n/a |
30 | BATF | chr8:12053405-12053605 | GM12878 | blood: | n/a | n/a |
31 | BATF | chr8:11921281-11921530 | GM12878 | blood: | n/a | n/a |
32 | BATF | chr8:12432790-12433098 | GM12878 | blood: | n/a | n/a |
33 | BATF | chr8:12400443-12400987 | GM12878 | blood: | n/a | chr8:12400955-12400964 |
34 | BATF | chr8:12081387-12081678 | GM12878 | blood: | n/a | n/a |
35 | BATF | chr8:12523072-12523287 | GM12878 | blood: | n/a | n/a |
36 | BATF | chr8:12409300-12409607 | GM12878 | blood: | n/a | n/a |
37 | BATF | chr8:12468401-12468697 | GM12878 | blood: | n/a | chr8:12468517-12468526 |
38 | BATF | chr8:12278913-12279099 | GM12878 | blood: | n/a | n/a |
39 | BATF | chr8:12355078-12355365 | GM12878 | blood: | n/a | n/a |
40 | BATF | chr8:12444788-12445496 | GM12878 | blood: | n/a | chr8:12445096-12445107 |
41 | BATF | chr8:12375868-12376447 | GM12878 | blood: | n/a | n/a |
42 | BATF | chr8:12050725-12051189 | GM12878 | blood: | n/a | n/a |
43 | BATF | chr8:12323897-12324188 | GM12878 | blood: | n/a | n/a |
44 | BATF | chr8:12219374-12219663 | GM12878 | blood: | n/a | n/a |
45 | BATF | chr8:12493505-12493669 | GM12878 | blood: | n/a | n/a |
46 | BATF | chr8:12282063-12282262 | GM12878 | blood: | n/a | n/a |
47 | BATF | chr8:12374707-12374931 | GM12878 | blood: | n/a | n/a |
48 | BATF | chr8:12292671-12292987 | GM12878 | blood: | n/a | n/a |
49 | BATF | chr8:12444646-12445599 | GM12878 | blood: | n/a | chr8:12445096-12445107 |
50 | BATF | chr8:12046059-12046358 | GM12878 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr8:12235727-12235777 | ovcar-3 | ovarian: | n/a |
2 | chr8:12454550-12454600 | AG04450 | lung: | fetal |
3 | chr8:12550605-12550655 | HUVEC | blood vessel: | n/a |
4 | chr8:11995002-11995052 | U87 | brain: | n/a |
5 | chr8:12283654-12283704 | BJ | skin: | n/a |
6 | chr8:12272377-12272427 | HNPCEpiC | eye: | n/a |
7 | chr8:12426635-12426685 | T-47D | breast: | n/a |
8 | chr8:12236258-12236308 | NT2-D1 | testis: | n/a |
9 | chr8:12235727-12235777 | ovcar-3 | ovarian: | n/a |
10 | chr8:12454550-12454600 | AG04450 | lung: | fetal |
11 | chr8:12550605-12550655 | HUVEC | blood vessel: | n/a |
12 | chr8:11995002-11995052 | U87 | brain: | n/a |
13 | chr8:12283654-12283704 | BJ | skin: | n/a |
14 | chr8:12272377-12272427 | HNPCEpiC | eye: | n/a |
15 | chr8:12426635-12426685 | T-47D | breast: | n/a |
16 | chr8:12236258-12236308 | NT2-D1 | testis: | n/a |
17 | chr8:12295064-12295114 | ovcar-3 | ovarian: | n/a |
18 | chr8:11996937-11996987 | MCF-7 | breast: | n/a |
19 | chr8:12216892-12216942 | HIPEpiC | eye: | n/a |
20 | chr8:11996358-11996408 | NB4 | blood: | n/a |
21 | chr8:11895252-11895302 | H1-hESC | embryonic stem cell: | embryo |
22 | chr8:11895252-11895302 | Hela-S3 | cervix: | n/a |
23 | chr8:12462881-12462931 | NHDF-neo | bronchial: | n/a |
24 | chr8:11946498-11946548 | LNCaP | prostate: | n/a |
25 | chr8:12256259-12256309 | CMK | blood: | n/a |
26 | chr8:11996937-11996987 | NB4 | blood: | n/a |
27 | chr8:12244544-12244594 | PrEC | prostate: | n/a |
28 | chr8:12521467-12521517 | NB4 | blood: | n/a |
29 | chr8:11986813-11986863 | GM06990 | blood: | n/a |
30 | chr8:12522691-12522741 | HepG2 | liver: | n/a |
31 | chr8:12219732-12219782 | HPAEpiC | pulmonary alveolar: | n/a |
32 | chr8:12458309-12458359 | IMR90 | lung: | fetal |
33 | chr8:12237780-12237830 | MCF-7 | breast: | n/a |
34 | chr8:12052206-12052256 | RPTEC | kidney: | n/a |
35 | chr8:12237900-12237950 | AG04450 | lung: | fetal |
36 | chr8:12513435-12513485 | HCT-116 | colon: | n/a |
37 | chr8:12517221-12517271 | HRPEpiC | eye: | n/a |
38 | chr8:11973029-11973079 | HL-60 | blood: | n/a |
39 | chr8:12458558-12458608 | K562 | blood: | n/a |
40 | chr8:12517221-12517271 | SK-N-SH | brain: | n/a |
41 | chr8:12034388-12034438 | CMK | blood: | n/a |
42 | chr8:12040795-12040845 | K562 | blood: | n/a |
43 | chr8:12550523-12550573 | SK-N-MC | brain: | n/a |
44 | chr8:11989285-11989335 | SK-N-SH_RA | brain: | n/a |
45 | chr8:11986933-11986983 | ovcar-3 | ovarian: | n/a |
46 | chr8:12027122-12027172 | ECC-1 | luminal epithelium: | n/a |
47 | chr8:11986876-11986926 | AG10803 | skin: | n/a |
48 | chr8:12236258-12236308 | ovcar-3 | ovarian: | n/a |
49 | chr8:12219732-12219782 | NHDF-neo | bronchial: | n/a |
50 | chr8:11997496-11997546 | NH-A | brain: | n/a |
(count:6 , 50 per page) page:
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr11:67722873..67723411-chr8:12516978..12517495,2 | MCF-7 | breast: | |
2 | chr10:101006536..101007134-chr8:11906757..11907257,2 | MCF-7 | breast: | |
3 | chr8:12522693..12523228-chr8:12698263..12698831,2 | MCF-7 | breast: | |
4 | chr11:64863606..64864139-chr8:11882400..11882963,2 | Hela-S3 | cervix: | |
5 | chr11:3601740..3602712-chr8:12522746..12523343,2 | MCF-7 | breast: | |
6 | chr8:11819737..11820672-chr8:11872272..11872975,3 | MCF-7 | breast: |
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-ZNF705D-3 | chr8:12295801-12296020 | XLOC_006721 |
2 | lnc-LONRF1-2 | chr8:12517271-12517338 | ENSG00000247397 |
3 | lnc-ZNF705D-2 | chr8:12388484-12388540 | NONHSAT125158 |
4 | lnc-ZNF705D-2 | chr8:12245248-12245374 | NONHSAT125139 |
5 | lnc-ZNF705D-2 | chr8:12355092-12355358 | NONHSAT125127 |
6 | lnc-ZNF705D-2 | chr8:12408261-12408540 | NONHSAT125158 |
7 | lnc-ZNF705D-2 | chr8:12294522-12295219 | NONHSAT125148 |
8 | lnc-LONRF1-2 | chr8:12516639-12516880 | ENSG00000247397 |
9 | lnc-AC130352.1-2 | chr8:12064280-12064606 | ENSG00000215248 |
10 | lnc-ZNF705D-2 | chr8:11973699-11973834 | NONHSAT125117 |
11 | lnc-ZNF705D-2 | chr8:12034324-12034474 | NONHSAT125117 |
12 | lnc-ZNF705D-2 | chr8:12059991-12060129 | NONHSAT125127 |
13 | lnc-LONRF1-2 | chr8:12465434-12465499 | NONHSAT125168 |
14 | lnc-AC130352.1-4 | chr8:12270336-12271882 | ENSG00000270074.1 |
15 | lnc-ZNF705D-3 | chr8:12298509-12298570 | XLOC_006721 |
16 | lnc-ZNF705D-2 | chr8:12219891-12220071 | ENSG00000227888.3 |
17 | lnc-ZNF705D-3 | chr8:12299097-12299373 | XLOC_006721 |
18 | lnc-ZNF705D-2 | chr8:12052320-12052946 | XLOC_006719 |
19 | lnc-USP17L2-1 | chr8:11985367-11986806 | NONHSAT125118 |
20 | lnc-ZNF705D-2 | chr8:12245760-12245805 | ENSG00000227888.3 |
21 | lnc-ZNF705D-2 | chr8:12053400-12053747 | XLOC_006719 |
22 | lnc-ZNF705D-3 | chr8:12298478-12298570 | XLOC_006721 |
23 | lnc-ZNF705D-2 | chr8:12053400-12053747 | NONHSAT125127 |
24 | lnc-FAM86B2-2 | chr8:12281922-12282230 | NONHSAT125144 |
25 | lnc-AC130352.1-5 | chr8:12289838-12289899 | ucscGeneNc_uc010lsi_1 |
26 | lnc-LONRF1-2 | chr8:12452490-12452805 | ENSG00000247397 |
27 | lnc-ZNF705D-2 | chr8:12245467-12245528 | NONHSAT125138 |
28 | lnc-ZNF705D-3 | chr8:12298478-12298570 | XLOC_006721 |
29 | lnc-USP17L2-2 | chr8:12008404-12008643 | NONHSAT125120 |
30 | lnc-AC130352.1-2 | chr8:12310554-12312147 | ENSG00000215248 |
31 | lnc-ZNF705D-4 | chr8:12333971-12334631 | ENSG00000270154.1 |
32 | lnc-LONRF1-2 | chr8:12513484-12514228 | ENSG00000247397 |
33 | lnc-ZNF705D-2 | chr8:12250716-12250979 | NONHSAT125138 |
34 | lnc-ZNF705D-3 | chr8:12295112-12295219 | XLOC_006721 |
35 | lnc-ZNF705D-2 | chr8:12423395-12424354 | NONHSAT125147 |
36 | lnc-ZNF705D-2 | chr8:12245250-12245374 | ENSG00000227888.3 |
37 | lnc-ZNF705D-3 | chr8:12298509-12298604 | XLOC_006721 |
38 | lnc-ZNF705D-2 | chr8:12059991-12060127 | XLOC_006719 |
39 | lnc-ZNF705D-2 | chr8:12295673-12296020 | NONHSAT125148 |
40 | lnc-FAM86B2-1 | chr8:12282231-12282893 | NONHSAT125145 |
41 | lnc-AC130352.1-3 | chr8:12435815-12438798 | NONHSAT125164 |
42 | lnc-ZNF705D-2 | chr8:12302265-12302403 | NONHSAT125148 |
43 | lnc-ZNF705D-2 | chr8:12056244-12056305 | NONHSAT125127 |
44 | lnc-ZNF705D-2 | chr8:12245760-12245843 | NONHSAT125138 |
45 | lnc-ZNF705D-2 | chr8:12338387-12338444 | NONHSAT125158 |
46 | lnc-ZNF705D-2 | chr8:12388452-12388540 | NONHSAT125127 |
47 | lnc-ZNF705D-2 | chr8:12034891-12035004 | NONHSAT125117 |
48 | lnc-LONRF1-2 | chr8:12522787-12522859 | ENSG00000247397 |
49 | lnc-ZNF705D-2 | chr8:12423395-12424354 | NONHSAT125127 |
50 | lnc-ZNF705D-3 | chr8:12295673-12296020 | XLOC_006721 |
No data |
No data |
Variant related genes | Relation type |
---|---|
FAM86B2 | TF binding region |
OR7E8P | TF binding region |
ENSG00000254581 | TF binding region |
DEFB109P3 | TF binding region |
ENSG00000238460 | TF binding region |
DEFB108P3 | TF binding region |
FAM66A | TF binding region |
ENPP7P6 | TF binding region |
RNA5SP253 | TF binding region |
USP17L7 | TF binding region |
ENSG00000255016 | TF binding region |
LINC00965 | TF binding region |
ENSG00000270154 | TF binding region |
ALG1L11P | TF binding region |
USP17L2 | TF binding region |
FAM90A2P | TF binding region |
DEFB109P1 | TF binding region |
FAM66D | TF binding region |
ENSG00000221714 | TF binding region |
ENSG00000255253 | TF binding region |
ENSG00000255122 | TF binding region |
DEFB108P4 | TF binding region |
ZNF705D | TF binding region |
ENSG00000254923 | TF binding region |
FAM85A | TF binding region |
ENSG00000265826 | TF binding region |
ENPP7P12 | TF binding region |
RPS3AP34 | TF binding region |
ENSG00000254507 | TF binding region |
ENSG00000233050 | TF binding region |
ALG1L12P | TF binding region |
FAM86B1 | TF binding region |
ENSG00000255098 | TF binding region |
ENSG00000238323 | TF binding region |
RNA5SP254 | TF binding region |
ENSG00000255556 | TF binding region |
RPS3AP35 | TF binding region |
ZNF705C | TF binding region |
DEFB130 | TF binding region |
OR7E160P | TF binding region |
ENSG00000237215 | TF binding region |
ENSG00000254423 | TF binding region |
FAM90A25P | TF binding region |
ENSG00000254700 | TF binding region |
ENSG00000266637 | TF binding region |
FAM86B2 | CpG island |
OR7E8P | CpG island |
ENSG00000254581 | CpG island |
DEFB109P3 | CpG island |
ENSG00000238460 | CpG island |
DEFB108P3 | CpG island |
FAM66A | CpG island |
ENPP7P6 | CpG island |
RNA5SP253 | CpG island |
USP17L7 | CpG island |
ENSG00000255016 | CpG island |
LINC00965 | CpG island |
ENSG00000270154 | CpG island |
ALG1L11P | CpG island |
USP17L2 | CpG island |
FAM90A2P | CpG island |
DEFB109P1 | CpG island |
FAM66D | CpG island |
ENSG00000221714 | CpG island |
ENSG00000255253 | CpG island |
ENSG00000255122 | CpG island |
DEFB108P4 | CpG island |
ZNF705D | CpG island |
ENSG00000254923 | CpG island |
FAM85A | CpG island |
ENSG00000265826 | CpG island |
ENPP7P12 | CpG island |
RPS3AP34 | CpG island |
ENSG00000254507 | CpG island |
ENSG00000233050 | CpG island |
ALG1L12P | CpG island |
FAM86B1 | CpG island |
ENSG00000255098 | CpG island |
ENSG00000238323 | CpG island |
RNA5SP254 | CpG island |
ENSG00000255556 | CpG island |
RPS3AP35 | CpG island |
ZNF705C | CpG island |
DEFB130 | CpG island |
OR7E160P | CpG island |
ENSG00000237215 | CpG island |
ENSG00000254423 | CpG island |
FAM90A25P | CpG island |
ENSG00000254700 | CpG island |
ENSG00000266637 | CpG island |
ENSG00000149823 | chromatin interactions |
ENSG00000255367 | chromatin interactions |
C9orf150 | miRNA target sites |
MYT1L | miRNA target sites |
RTF1 | miRNA target sites |
ZNF597 | miRNA target sites |
PTPRJ | miRNA target sites |
POTEG | miRNA target sites |
TMEM30B | miRNA target sites |
RGS20 | miRNA target sites |
GATA2 | miRNA target sites |
PIAS2 | miRNA target sites |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs111897736 | chr8:11863174-11863175 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
2 | rs550262306 | chr8:11863192-11863193 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
3 | rs72496203 | chr8:11863206-11863207 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
4 | rs200015107 | chr8:11863253-11863254 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
5 | rs544375523 | chr8:11864032-11864033 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
6 | rs530469382 | chr8:11866812-11866813 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
7 | rs552241891 | chr8:11866860-11866861 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
8 | rs570490098 | chr8:11866861-11866862 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
9 | rs7823991 | chr8:11866862-11866863 | Enhancers | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
10 | rs546902491 | chr8:11866863-11866864 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
11 | rs568736359 | chr8:11866879-11866880 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
12 | rs536166169 | chr8:11866893-11866894 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
13 | rs557347068 | chr8:11866897-11866898 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
14 | rs386722355 | chr8:11866906-11866907 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
15 | rs138780537 | chr8:11866907-11866908 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
16 | rs558208851 | chr8:11866908-11866909 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
17 | rs573278035 | chr8:11866912-11866913 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
18 | rs566399012 | chr8:11866915-11866916 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
19 | rs541186520 | chr8:11866920-11866921 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
20 | rs368822152 | chr8:11866934-11866935 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
21 | rs185861986 | chr8:11866939-11866940 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
22 | rs192441543 | chr8:11866950-11866951 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
23 | rs373041660 | chr8:11866962-11866963 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
24 | rs541716151 | chr8:11866990-11866991 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
25 | rs28657064 | chr8:11867041-11867042 | Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
26 | rs28495388 | chr8:11867046-11867047 | Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
27 | rs377064443 | chr8:11867058-11867059 | Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
28 | rs149415907 | chr8:11867060-11867061 | Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
29 | rs548744920 | chr8:11867072-11867073 | Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
30 | rs545512154 | chr8:11867077-11867078 | Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
31 | rs564182763 | chr8:11867079-11867080 | Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
32 | rs528192674 | chr8:11867085-11867086 | Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
33 | rs111765751 | chr8:11867097-11867098 | Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
34 | rs562270659 | chr8:11867106-11867107 | Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
35 | rs529559900 | chr8:11867113-11867114 | Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
36 | rs551287794 | chr8:11867125-11867126 | Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
37 | rs187666323 | chr8:11867133-11867134 | Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
38 | rs138483844 | chr8:11867139-11867140 | Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
39 | rs190637691 | chr8:11867151-11867152 | Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
40 | rs371430231 | chr8:11867158-11867159 | Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
41 | rs551498951 | chr8:11867159-11867160 | Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
42 | rs182879074 | chr8:11867160-11867161 | Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
43 | rs187226365 | chr8:11867163-11867164 | Enhancers Active TSS | n/a | n/a | Overlapped CNVs | n/a |
44 | rs555485562 | chr8:11867202-11867203 | Active TSS Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
45 | rs143013861 | chr8:11867206-11867207 | Active TSS Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
46 | rs546694849 | chr8:11867223-11867224 | Active TSS Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
47 | rs55798133 | chr8:11867248-11867249 | Active TSS Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
48 | rs55805862 | chr8:11867252-11867253 | Active TSS Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
49 | rs535302408 | chr8:11867256-11867257 | Active TSS Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
50 | rs139058606 | chr8:11867264-11867265 | Active TSS Enhancers Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Crohn''s disease | 19220326 | CNVD |
Psoriasis | 19220326 | CNVD |
Prostate cancer | 21965145 | CNVD |
Prostate cancer | 18515986 | CNVD |
Chronic obstructive pulmonary disease | 20378733 | CNVD |
Autism | 18414403 | CNVD |
Cancer | 21183584 | CNVD |
Non-syndromic sensorineural hearing loss | 15273396 | CNVD |
Breast cancer | 17603634 | CNVD |
Myeloproliferative neoplasm | 20015882 | CNVD |
Ovarian cancer | 20844748 | CNVD |
Cervical cancer | 17311676 | CNVD |
High-grade prostatic intraepithelial neoplasia | 16573809 | CNVD |
Non-syndromic sensorineural hearing loss | 20606397 | CNVD |
Schizophrenia | 20877625 | CNVD |
Disorders of sex development | 21048976 | CNVD |
Colorectal cancer | 16272173 | CNVD |
Basal cell lymphoma | 17170743 | CNVD |
Follicular lymphoma | 17170743 | CNVD |
Breast cancer | 17001317 | CNVD |
Thyroid cancer | 19087340 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Heart disease | 21282601 | CNVD |
Prostate cancer | 16573809 | CNVD |
T-cell lymphomas | 19863542 | CNVD |
Ovarian cancer | 22174824 | CNVD |
Colorectal cancer | 21297112 | CNVD |
Hodgkin''s lymphoma | 18641027 | CNVD |
Salivary gland tumor | 18059337 | CNVD |
Breast cancer | 17133270 | CNVD |
Melanoma | 18172304 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Chronic lymphocytic leukemia | 18922857 | CNVD |
Breast cancer | 17393978 | CNVD |
Chronic lymphocytic leukemia | 21546498 | CNVD |
Cancer | 21637783 | CNVD |
Breast cancer | 20837533 | CNVD |
Squamous cell cancer | 21044232 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Cancer | 22429812 | CNVD |
Non-small cell lung cancer | 21044232 | CNVD |
Non-syndromic sensorineural hearing loss | 18471307 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Basal cell lymphoma | 21115979 | CNVD |
Breast cancer | 21264507 | CNVD |
Carcinoma ex pleomorphic adenoma | 18828159 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Oral cancer | 21386901 | CNVD |
Prostate cancer | 21088497 | CNVD |
Breast cancer | 20940404 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Embryonal rhabdomyosarcoma | 16790082 | CNVD |
Gastric cancer | 17167181 | CNVD |
Prostate cancer | 16705090 | CNVD |
8p-syndrome | 17576883 | CNVD |
Human rectal carcinomas | 16397240 | CNVD |
Medulloblastoma | 16968546 | CNVD |
Lung adenocarcinoma | 19525976 | CNVD |
Lung cancer | 19525976 | CNVD |
Prostate cancer | 17245344 | CNVD |
Gastrointestinal stromal cancer | 16982739 | CNVD |
Cancer | 16751803 | CNVD |
Wilms tumour | 21544195 | CNVD |
Gastric cancer | 17908304 | CNVD |
Autism | 19415332 | CNVD |
Malaria | 21533027 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Acute promyelocytic leukemia | 19109227 | CNVD |
Breast cancer | 21245420 | CNVD |
Acute lymphoblastic leukemia | 21248843 | CNVD |
Breast cancer | 21785460 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Acute myeloid leukemia | 20729466 | CNVD |
Breast cancer | 21509527 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Acute lymphoblastic leukemia | 22237106 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
Prostate cancer | 18632612 | CNVD |
Breast cancer | 21858162 | CNVD |
lymphocytic leukemia | 21291569 | CNVD |
Liver carcinoma | 19366792 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Congenital diaphragmatic hernia | 21064195 | CNVD |
Autism | 22495311 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Intellectual disability | 22045946 | CNVD |
Malignant fibrous histiocytomas | 21085701 | CNVD |
Breast cancer | 16608533 | CNVD |
Seminomas | 18059402 | CNVD |
Lung cancer | 18438408 | CNVD |
Lung squamous cell carcinoma | 22363434 | CNVD |
Medulloblastoma | 16783165 | CNVD |
Gastric cancer | 18160780 | CNVD |
Breast cancer | 21990379 | CNVD |
Psoriasis | 20403174 | CNVD |
Psoriasis | 20663923 | CNVD |
Crohn''s disease | 16909382 | CNVD |
Cancer | 21129771 | CNVD |
Congenital diaphragmatic hernia | 21085971 | CNVD |
Crohn''s disease | 20877625 | CNVD |
Inflammatory disorder | 20877625 | CNVD |
Cardiac defect | 21933911 | CNVD |
Psoriasis | 18059266 | CNVD |
Barrett''s adenocarcinoma | 18663352 | CNVD |
Psoriasis | 20877625 | CNVD |
Mental retardation | 17847001 | CNVD |
Prostate cancer | 17217626 | CNVD |
Schizophrenia | 21399695 | CNVD |
Colorectal cancer | 21128281 | CNVD |
Colorectal cancer | 19455253 | CNVD |
Psoriasis | 18848619 | CNVD |
Squamous cell cancer | 19047905 | CNVD |
Colorectal cancer | 17229543 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Malignant peripheral nerve sheath tumor | 18522746 | CNVD |
Myxofibrosarcoma | 16751306 | CNVD |
Immune disease | 21572526 | CNVD |
Non-small cell lung cancer | 21829676 | CNVD |
Ovarian neoplasms | 16753589 | CNVD |
Kallmann Syndrome 2 | 22470819 | CNVD |
Developmental disorder | 20461109 | CNVD |
Ovarian clear cell carcinoma | 21343371 | CNVD |
Glioblastoma multiforme | 21138945 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Breast cancer | 21364760 | CNVD |
Gastric cancer | 21811585 | CNVD |
Colorectal cancer | 16774939 | CNVD |
Acute lymphoblastic leukemia | 21390130 | CNVD |
Cancer | 20164919 | CNVD |
Pancreatic ductal adenocarcinoma | 19077451 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Osteosarcoma | 21215367 | CNVD |
Breast cancer | 22522925 | CNVD |
Renal cell carcinoma | 21215367 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Schizophrenia | 20967226 | CNVD |
Non-syndromic sensorineural hearing loss | 21030649 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Melanoma | 20688739 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Intracranial tumor | 22048656 | CNVD |
Ollier disease | 21235737 | CNVD |
Schizophrenia | 23813976 | CNVD |
Cancer | 21215367 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:11866800-11867200 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
2 | chr8:11867000-11867200 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
3 | chr8:11867000-11867400 | Active TSS | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
4 | chr8:11867000-11869800 | Enhancers | Foreskin Melanocyte Primary Cells skin01 | Skin |
5 | chr8:11867200-11868000 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
6 | chr8:11868000-11869800 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
7 | chr8:11869000-11869200 | Enhancers | iPS DF 6.9 Cell Line | embryonic stem cell |
8 | chr8:11869800-11870200 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
9 | chr8:11869800-11870400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
10 | chr8:11870200-11871000 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
11 | chr8:11870400-11872800 | Active TSS | Foreskin Melanocyte Primary Cells skin01 | Skin |
12 | chr8:11870800-11871200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
13 | chr8:11871000-11871200 | Flanking Active TSS | Foreskin Melanocyte Primary Cells skin03 | Skin |
14 | chr8:11871200-11872800 | Active TSS | Foreskin Melanocyte Primary Cells skin03 | Skin |
15 | chr8:11871400-11871600 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
16 | chr8:11871400-11871800 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
17 | chr8:11871400-11872600 | Bivalent/Poised TSS | iPS-15b Cell Line | embryonic stem cell |
18 | chr8:11871600-11871800 | Bivalent Enhancer | H1 Derived Mesenchymal Stem Cells | ES cell derived |
19 | chr8:11871600-11871800 | Enhancers | Breast Myoepithelial Primary Cells | Breast |
20 | chr8:11871600-11871800 | Enhancers | Stomach Smooth Muscle | stomach |
21 | chr8:11871600-11872000 | Bivalent Enhancer | iPS-18 Cell Line | embryonic stem cell |
22 | chr8:11871600-11872000 | Bivalent Enhancer | ES-UCSF4 Cell Line | embryonic stem cell |
23 | chr8:11871600-11872000 | Bivalent Enhancer | Foreskin Fibroblast Primary Cells skin01 | Skin |
24 | chr8:11871600-11872000 | Bivalent Enhancer | Fetal Stomach | stomach |
25 | chr8:11871600-11872000 | Enhancers | HMEC | breast |
26 | chr8:11871800-11872000 | Bivalent Enhancer | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
27 | chr8:11871800-11872200 | Bivalent Enhancer | Primary T helper cells PMA-I stimulated | -- |
28 | chr8:11871800-11872200 | Enhancers | Colon Smooth Muscle | Colon |
29 | chr8:11871800-11872400 | Enhancers | Primary B cells from cord blood | blood |
30 | chr8:11871800-11872400 | Bivalent Enhancer | Primary B cells from peripheral blood | blood |
31 | chr8:11871800-11872400 | Active TSS | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
32 | chr8:11871800-11872600 | Active TSS | H9 Cell Line | embryonic stem cell |
33 | chr8:11871800-11872600 | Bivalent/Poised TSS | HUES64 Cell Line | embryonic stem cell |
34 | chr8:11871800-11872600 | Flanking Active TSS | iPS DF 19.11 Cell Line | embryonic stem cell |
35 | chr8:11871800-11872600 | Active TSS | Breast Myoepithelial Primary Cells | Breast |
36 | chr8:11871800-11872600 | Active TSS | Brain Anterior Caudate | brain |
37 | chr8:11871800-11872600 | Active TSS | Stomach Smooth Muscle | stomach |
38 | chr8:11871800-11872800 | Bivalent/Poised TSS | HUES6 Cell Line | embryonic stem cell |
39 | chr8:11871800-11873000 | Enhancers | H1 Derived Mesenchymal Stem Cells | ES cell derived |
40 | chr8:11872000-11872200 | Bivalent/Poised TSS | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
41 | chr8:11872000-11872200 | Flanking Bivalent TSS/Enh | ES-UCSF4 Cell Line | embryonic stem cell |
42 | chr8:11872000-11872200 | Flanking Active TSS | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
43 | chr8:11872000-11872200 | Enhancers | Primary hematopoietic stem cells | blood |
44 | chr8:11872000-11872200 | Enhancers | Primary T helper 17 cells PMA-I stimulated | -- |
45 | chr8:11872000-11872200 | Bivalent/Poised TSS | Primary T regulatory cells fromperipheralblood | blood |
46 | chr8:11872000-11872200 | Active TSS | Primary T cells effector/memory enriched fromperipheralblood | blood |
47 | chr8:11872000-11872200 | Flanking Bivalent TSS/Enh | Foreskin Keratinocyte Primary Cells skin03 | Skin |
48 | chr8:11872000-11872200 | Flanking Active TSS | Adipose Nuclei | Adipose |
49 | chr8:11872000-11872200 | Bivalent Enhancer | Fetal Adrenal Gland | Adrenal Gland |
50 | chr8:11872000-11872200 | Enhancers | Fetal Brain Male | brain |