Variant report

Variant	nsv1035235
Chromosome Location	chr10:45442303-45467948
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:1381)
CpG islands
(count:1159)
Chromatin interactive
region (count:51)
LncRNA
region (count:10)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:1381 , 50 per page) page: 1 2 3 4 5 6 7 ... 28

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr10:45456035-45456565	HepG2	liver:	n/a	n/a
2	ARID3A	chr10:45453802-45454070	K562	blood:	n/a	n/a
3	ARID3A	chr10:45453727-45453965	HepG2	liver:	n/a	n/a
4	ARID3A	chr10:45461727-45461943	HepG2	liver:	n/a	n/a
5	ARID3A	chr10:45454724-45455078	HepG2	liver:	n/a	n/a
6	ARID3A	chr10:45454361-45454455	HepG2	liver:	n/a	n/a
7	ATF2	chr10:45463329-45463782	GM12878	blood:	n/a	n/a
8	ATF2	chr10:45461217-45461774	GM12878	blood:	n/a	n/a
9	ATF2	chr10:45461203-45462059	GM12878	blood:	n/a	n/a
10	BACH1	chr10:45458777-45459179	H1-hESC	embryonic stem cell:	n/a	n/a
11	BACH1	chr10:45454792-45454890	K562	blood:	n/a	n/a
12	BATF	chr10:45443257-45443693	GM12878	blood:	n/a	n/a
13	BATF	chr10:45461771-45462037	GM12878	blood:	n/a	chr10:45461925-45461936
14	BATF	chr10:45458995-45459283	GM12878	blood:	n/a	n/a
15	BATF	chr10:45458892-45459346	GM12878	blood:	n/a	n/a
16	BATF	chr10:45443261-45443584	GM12878	blood:	n/a	n/a
17	BCL11A	chr10:45443192-45443587	GM12878	blood:	n/a	chr10:45443377-45443386
18	BCL3	chr10:45443128-45443504	GM12878	blood:	n/a	chr10:45443377-45443386
19	BCLAF1	chr10:45454395-45455151	GM12878	blood:	n/a	chr10:45454731-45454738
20	BCLAF1	chr10:45461087-45461907	GM12878	blood:	n/a	chr10:45461162-45461175 chr10:45461777-45461786 chr10:45461707-45461716
21	BCLAF1	chr10:45459377-45459938	GM12878	blood:	n/a	n/a
22	BCLAF1	chr10:45442920-45443742	GM12878	blood:	n/a	chr10:45443377-45443386
23	BHLHE40	chr10:45443166-45443222	K562	blood:	n/a	n/a
24	BHLHE40	chr10:45457627-45457986	GM12878	blood:	n/a	n/a
25	BHLHE40	chr10:45445821-45445885	GM12878	blood:	n/a	n/a
26	BHLHE40	chr10:45461162-45462089	GM12878	blood:	n/a	n/a
27	BHLHE40	chr10:45454571-45455426	K562	blood:	n/a	n/a
28	BHLHE40	chr10:45456346-45456826	GM12878	blood:	n/a	n/a
29	BHLHE40	chr10:45463946-45464581	GM12878	blood:	n/a	n/a
30	BHLHE40	chr10:45464581-45464592	K562	blood:	n/a	n/a
31	BHLHE40	chr10:45458809-45459955	GM12878	blood:	n/a	n/a
32	BHLHE40	chr10:45465551-45465846	K562	blood:	n/a	n/a
33	BHLHE40	chr10:45457669-45457916	K562	blood:	n/a	n/a
34	BHLHE40	chr10:45454860-45455309	GM12878	blood:	n/a	n/a
35	BRCA1	chr10:45455347-45455389	HepG2	liver:	n/a	n/a
36	BRCA1	chr10:45459561-45459702	GM12878	blood:	n/a	n/a
37	CCNT2	chr10:45454640-45455524	K562	blood:	n/a	chr10:45454721-45454741
38	CEBPB	chr10:45454525-45454959	HepG2	liver:	n/a	n/a
39	CEBPB	chr10:45454530-45454944	IMR90	lung:	n/a	n/a
40	CEBPB	chr10:45455224-45455400	HepG2	liver:	n/a	n/a
41	CEBPB	chr10:45455309-45455828	H1-hESC	embryonic stem cell:	n/a	n/a
42	CEBPB	chr10:45454515-45454959	K562	blood:	n/a	n/a
43	CEBPB	chr10:45454470-45454904	K562	blood:	n/a	n/a
44	CEBPB	chr10:45457719-45457819	HepG2	liver:	n/a	n/a
45	CEBPB	chr10:45463674-45464154	IMR90	lung:	n/a	n/a
46	CEBPB	chr10:45454531-45455511	HepG2	liver:	n/a	n/a
47	CEBPB	chr10:45463643-45464116	HepG2	liver:	n/a	n/a
48	CEBPB	chr10:45448905-45449035	K562	blood:	n/a	chr10:45448971-45448982
49	CEBPB	chr10:45454515-45455017	Hela-S3	cervix:	n/a	n/a
50	CEBPB	chr10:45463839-45464076	K562	blood:	n/a	n/a

(count:1159 , 50 per page) page: 1 2 3 4 5 6 7 ... 24

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr10:45455114-45455164	HCF	heart:	n/a
2	chr10:45454796-45454846	K562	blood:	n/a
3	chr10:45454796-45454846	NT2-D1	testis:	n/a
4	chr10:45455114-45455164	SK-N-MC	brain:	n/a
5	chr10:45455098-45455148	HIPEpiC	eye:	n/a
6	chr10:45448095-45448145	BJ	skin:	n/a
7	chr10:45455500-45455550	GM06990	blood:	n/a
8	chr10:45448095-45448145	AG04449	skin:	fetal
9	chr10:45448095-45448145	Jurkat	blood:	n/a
10	chr10:45455098-45455148	MCF-7	breast:	n/a
11	chr10:45454982-45455032	HCPEpiC	choroid plexus:	n/a
12	chr10:45455347-45455397	SAEC	small airway:	n/a
13	chr10:45455109-45455159	CMK	blood:	n/a
14	chr10:45463032-45463082	NB4	blood:	n/a
15	chr10:45455098-45455148	PANC-1	pancreas:	n/a
16	chr10:45463032-45463082	AG04449	skin:	fetal
17	chr10:45455421-45455471	ECC-1	luminal epithelium:	n/a
18	chr10:45455114-45455164	AG09309	skin:	n/a
19	chr10:45455347-45455397	HCT-116	colon:	n/a
20	chr10:45460926-45460976	NH-A	brain:	n/a
21	chr10:45454574-45454624	ovcar-3	ovarian:	n/a
22	chr10:45455245-45455295	Hela-S3	cervix:	n/a
23	chr10:45455421-45455471	NHDF-neo	bronchial:	n/a
24	chr10:45454944-45454994	HEEpiC	esophagus:	n/a
25	chr10:45455421-45455471	AG04450	lung:	fetal
26	chr10:45466563-45466613	HL-60	blood:	n/a
27	chr10:45454574-45454624	PANC-1	pancreas:	n/a
28	chr10:45455104-45455154	U87	brain:	n/a
29	chr10:45455104-45455154	NB4	blood:	n/a
30	chr10:45454796-45454846	MCF10A-Er-Src	breast:	n/a
31	chr10:45460926-45460976	Hepatocyte	liver:	n/a
32	chr10:45455109-45455159	GM19239	blood:	n/a
33	chr10:45455109-45455159	ECC-1	luminal epithelium:	n/a
34	chr10:45455098-45455148	NT2-D1	testis:	n/a
35	chr10:45454982-45455032	MCF10A-Er-Src	breast:	n/a
36	chr10:45460926-45460976	SK-N-SH	brain:	n/a
37	chr10:45463032-45463082	NHBE	bronchial:	n/a
38	chr10:45455114-45455164	HAEpiC	amniotic membrane:	n/a
39	chr10:45454982-45455032	ECC-1	luminal epithelium:	n/a
40	chr10:45455141-45455191	Caco-2	colon:	n/a
41	chr10:45460926-45460976	MCF10A-Er-Src	breast:	n/a
42	chr10:45455104-45455154	SAEC	small airway:	n/a
43	chr10:45448095-45448145	NT2-D1	testis:	n/a
44	chr10:45455104-45455154	HCPEpiC	choroid plexus:	n/a
45	chr10:45455500-45455550	SK-N-SH_RA	brain:	n/a
46	chr10:45460926-45460976	HCF	heart:	n/a
47	chr10:45455098-45455148	NH-A	brain:	n/a
48	chr10:45466563-45466613	AG04450	lung:	fetal
49	chr10:45448095-45448145	HRE	kidney:	n/a
50	chr10:45466563-45466613	IMR90	lung:	fetal

(count:51 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr10:45458918..45461425-chr10:45473406..45475614,2	MCF-7	breast:
2	chr10:45443298..45445238-chr10:45469155..45471485,2	MCF-7	breast:
3	chr10:45452754..45457463-chr10:45457605..45460897,6	MCF-7	breast:
4	chr10:45443748..45446726-chr10:45456991..45458960,2	MCF-7	breast:
5	chr10:45461482..45464427-chr10:45495628..45497764,2	K562	blood:
6	chr10:45435808..45438412-chr10:45446821..45449787,2	MCF-7	breast:
7	chr10:45454711..45455626-chr11:61159545..61160067,2	NB4	blood:
8	chr10:45440628..45443300-chr10:45445744..45447825,2	K562	blood:
9	chr10:45466696..45473467-chr10:45492241..45499604,15	K562	blood:
10	chr10:45448181..45450867-chr10:45471052..45472632,2	K562	blood:
11	chr10:45445329..45447053-chr10:45471994..45473924,2	K562	blood:
12	chr10:45427938..45428722-chr10:45460765..45461409,2	MCF-7	breast:
13	chr10:45462150..45464959-chr10:45472680..45475248,4	MCF-7	breast:
14	chr10:45443393..45446085-chr10:45453694..45455666,2	MCF-7	breast:
15	chr10:45441960..45443974-chr10:45454231..45456488,3	MCF-7	breast:
16	chr10:45453904..45457174-chr10:45457388..45460255,4	K562	blood:
17	chr10:45442718..45444232-chr10:45467688..45470115,2	MCF-7	breast:
18	chr10:45439710..45443300-chr10:45445744..45449321,3	K562	blood:
19	chr10:45443867..45446149-chr10:45450890..45453050,2	MCF-7	breast:
20	chr10:45439564..45443140-chr10:45444900..45447735,4	MCF-7	breast:
21	chr10:45443163..45445127-chr10:45450865..45453676,2	K562	blood:
22	chr10:45453822..45456715-chr10:45457223..45459708,3	MCF-7	breast:
23	chr10:45443748..45446726-chr10:45456991..45458960,2	MCF-7	breast:
24	chr10:45444920..45446701-chr10:45447685..45449342,2	MCF-7	breast:
25	chr10:45452890..45456408-chr10:45484181..45487033,3	MCF-7	breast:
26	chr10:45462117..45462630-chr10:45470165..45470952,2	MCF-7	breast:
27	chr10:45440628..45443300-chr10:45445744..45447825,2	K562	blood:
28	chr10:45443867..45446149-chr10:45450890..45453050,2	MCF-7	breast:
29	chr10:45459948..45462747-chr10:45463776..45467477,3	MCF-7	breast:
30	chr10:45438306..45442346-chr10:45451972..45455463,4	MCF-7	breast:
31	chr10:45443642..45445614-chr10:45473537..45475960,2	MCF-7	breast:
32	chr10:45460257..45463291-chr10:45472761..45475493,4	MCF-7	breast:
33	chr10:45439710..45443300-chr10:45445744..45449321,3	K562	blood:
34	chr10:45442718..45444232-chr10:45467688..45470115,2	MCF-7	breast:
35	chr10:45428159..45428765-chr10:45460639..45461384,2	MCF-7	breast:
36	chr10:45430656..45433137-chr10:45453264..45455350,2	K562	blood:
37	chr10:45447495..45450982-chr10:45474021..45476949,3	MCF-7	breast:
38	chr10:45454284..45457115-chr10:45494603..45497911,3	K562	blood:
39	chr10:45444920..45446701-chr10:45447685..45449342,2	MCF-7	breast:
40	chr10:45454284..45457608-chr10:45494603..45497438,3	K562	blood:
41	chr10:45443163..45445127-chr10:45450865..45453676,2	K562	blood:
42	chr10:45440452..45443413-chr10:45461070..45463781,2	MCF-7	breast:
43	chr10:45463003..45464731-chr10:45465412..45467075,2	MCF-7	breast:
44	chr10:45440452..45443413-chr10:45461070..45463781,2	MCF-7	breast:
45	chr10:45467811..45472693-chr10:45495081..45499604,7	K562	blood:
46	chr10:45453318..45455327-chr10:45477856..45480219,2	MCF-7	breast:
47	chr10:45436735..45439619-chr10:45441903..45444431,2	MCF-7	breast:
48	chr10:45452399..45456775-chr10:45472666..45475790,4	MCF-7	breast:
49	chr10:45444691..45447069-chr10:45452489..45454893,3	MCF-7	breast:
50	chr10:45455308..45456060-chr10:45470129..45471001,2	K562	blood:

(count:10 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-C10orf10-4	chr10:45454365-45454906	ENSG00000273363.1
2	lnc-C10orf10-2	chr10:45455040-45455137	ENSG00000224812
3	lnc-C10orf10-2	chr10:45455040-45455137	ENSG00000224812.2
4	lnc-C10orf10-3	chr10:45466429-45467123	NONHSAT013051
5	lnc-C10orf10-4	chr10:45453181-45455016	NONHSAT013049
6	lnc-RASSF4-1	chr10:45450917-45451173	ENSG00000223462.2
7	lnc-C10orf10-2	chr10:45455040-45455137	NONHSAT013043
8	lnc-RASSF4-1	chr10:45450917-45451176	XLOC_008475
9	lnc-RASSF4-1	chr10:45449006-45449110	XLOC_008475
10	lnc-RASSF4-1	chr10:45450917-45451173	XLOC_008475

No data

Variant related genes	Relation type
ENSG00000273363	TF binding region
TMEM72-AS1	TF binding region
RASSF4	TF binding region
ENSG00000273363	CpG island
TMEM72-AS1	CpG island
RASSF4	CpG island
ENSG00000165511	chromatin interactions
ENSG00000165507	chromatin interactions
ENSG00000223462	chromatin interactions
ENSG00000165512	chromatin interactions
ENSG00000224812	chromatin interactions
ENSG00000273363	chromatin interactions
ENSG00000187049	chromatin interactions
ENSG00000107551	chromatin interactions
SNX18	miRNA target sites
RASGRP3	miRNA target sites
EIF4E	miRNA target sites

Extended variants
information (count: 1024 )
Associated
traits (count: 60 )

Variant overlapped rSNPs/rCNVs (count:1024 , 50 per page) page: 1 2 3 4 5 6 7 ... 21

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs11597898	chr10:45442303-45442304	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
2	rs7095984	chr10:45442314-45442315	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs147371005	chr10:45442336-45442337	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
4	rs570738224	chr10:45442348-45442349	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
5	rs116466809	chr10:45442360-45442361	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
6	rs113343520	chr10:45442365-45442366	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
7	rs572110140	chr10:45442375-45442376	Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
8	rs538923321	chr10:45442445-45442446	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
9	rs557322849	chr10:45442484-45442485	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
10	rs7096289	chr10:45442544-45442545	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs542806704	chr10:45442601-45442602	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
12	rs560933775	chr10:45442611-45442612	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
13	rs150508848	chr10:45442644-45442645	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
14	rs11239284	chr10:45442647-45442648	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
15	rs71515319	chr10:45442648-45442649	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
16	rs375735004	chr10:45442650-45442651	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
17	rs182029022	chr10:45442672-45442673	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
18	rs186507558	chr10:45442677-45442678	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
19	rs191847222	chr10:45442695-45442696	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
20	rs34095425	chr10:45442708-45442709	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
21	rs139464881	chr10:45442720-45442721	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
22	rs532013010	chr10:45442735-45442736	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
23	rs71490724	chr10:45442793-45442794	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
24	rs562808583	chr10:45442797-45442798	Weak transcription Enhancers	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
25	rs373042988	chr10:45442881-45442882	Enhancers Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
26	rs75844316	chr10:45442902-45442903	Enhancers Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
27	rs11239285	chr10:45442933-45442934	Enhancers Weak transcription	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
28	rs34453249	chr10:45443001-45443002	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs145642508	chr10:45443054-45443055	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
30	rs555036728	chr10:45443066-45443067	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
31	rs115516369	chr10:45443161-45443162	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
32	rs182891337	chr10:45443177-45443178	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
33	rs78176009	chr10:45443271-45443272	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
34	rs144086936	chr10:45443290-45443291	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
35	rs575567179	chr10:45443310-45443311	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
36	rs74128109	chr10:45443351-45443352	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
37	rs79392035	chr10:45443360-45443361	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs374447727	chr10:45443400-45443401	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs572993733	chr10:45443422-45443423	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs79189366	chr10:45443440-45443441	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
41	rs397845091	chr10:45443441-45443442	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs564857370	chr10:45443444-45443445	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs143734116	chr10:45443458-45443459	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs543765240	chr10:45443481-45443482	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
45	rs949607	chr10:45443514-45443515	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
46	rs530325622	chr10:45443515-45443516	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs10508891	chr10:45443527-45443528	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
48	rs148075028	chr10:45443529-45443530	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs527911278	chr10:45443580-45443581	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
50	rs376885259	chr10:45443592-45443593	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:60)

Disease	PMID	Source
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Medulloblastoma	21979893	CNVD
Melanoma	18172304	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Lung cancer	18438408	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Ewing''s sarcoma	17952124	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Esophageal cancer	21851588	CNVD
Prostate cancer	18632612	CNVD
Autism	18414403	CNVD
Cockayne syndrome	18421352	CNVD
Glioblastoma	16823260	CNVD
Medulloblastoma	16968546	CNVD
Neuroblastoma	17533364	CNVD
Mental retardation	21062444	CNVD
Cancer	21183584	CNVD
T-cell lymphomas	19863542	CNVD
Testicular germ cell tumor	18059402	CNVD
Squamous cell cancer	21044232	CNVD
Glioma	21971842	CNVD
Cancer	21637783	CNVD
Non-small cell lung cancer	21044232	CNVD
Non-syndromic sensorineural hearing loss	18471307	CNVD
Colorectal cancer	20709793	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Liposarcoma	21253554	CNVD
Oligodendroglial tumors	17285580	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21364760	CNVD
Myelofibrosis	22110671	CNVD
Schizophrenia	22241247	CNVD
Intellectual disability	21811512	CNVD
Papillary thyroid carcinoma	21436994	CNVD
Hirschsprung''s Disease	21712996	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Obesity	21956041	CNVD
Renal cell carcinoma	18765545	CNVD
Breast cancer	21785460	CNVD
small cell lung cancer	20016488	CNVD
Developmental delay	21948486	CNVD
Dysmorphic features	21948486	CNVD
Epilepsy	21948486	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
Non-syndromic sensorineural hearing loss	17289997	CNVD
Glioblastoma multiforme	21138945	CNVD
Glioblastoma multiforme	21510904	CNVD
Melanoma	20877625	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD

Chromatin state (count:1738 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:45431200-45453200	Weak transcription	Gastric	stomach
2	chr10:45440800-45445800	Enhancers	Adipose Nuclei	Adipose
3	chr10:45441000-45446600	Enhancers	Fetal Muscle Leg	muscle
4	chr10:45441200-45442400	Enhancers	Left Ventricle	heart
5	chr10:45441200-45443600	Enhancers	HepG2	liver
6	chr10:45441200-45443800	Enhancers	Psoas Muscle	Psoas
7	chr10:45441200-45447200	Enhancers	Primary monocytes fromperipheralblood	blood
8	chr10:45441400-45447600	Enhancers	Fetal Intestine Small	intestine
9	chr10:45441400-45449200	Enhancers	Fetal Heart	heart
10	chr10:45441600-45442400	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr10:45441600-45442400	Enhancers	Fetal Intestine Large	intestine
12	chr10:45441600-45443200	Enhancers	Skeletal Muscle Male	skeletal muscle
13	chr10:45441600-45444000	Enhancers	Right Ventricle	heart
14	chr10:45441600-45445200	Enhancers	Primary neutrophils fromperipheralblood	blood
15	chr10:45441600-45446200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr10:45441800-45442400	Weak transcription	Primary B cells from cord blood	blood
17	chr10:45441800-45442800	Weak transcription	Fetal Muscle Trunk	muscle
18	chr10:45441800-45443000	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
19	chr10:45441800-45443200	Weak transcription	Placenta	Placenta
20	chr10:45441800-45444400	Enhancers	HSMM	muscle
21	chr10:45441800-45445200	Weak transcription	Rectal Smooth Muscle	rectum
22	chr10:45441800-45446400	Enhancers	Primary B cells from peripheral blood	blood
23	chr10:45442000-45442400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
24	chr10:45442000-45444400	Weak transcription	Brain Substantia Nigra	brain
25	chr10:45442000-45446400	Enhancers	Skeletal Muscle Female	skeletal muscle
26	chr10:45442000-45451200	Weak transcription	Brain Cingulate Gyrus	brain
27	chr10:45442200-45442400	Flanking Active TSS	HSMMtube	muscle
28	chr10:45442200-45442400	Enhancers	Osteobl	bone
29	chr10:45442200-45442800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
30	chr10:45442200-45442800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
31	chr10:45442200-45443200	Weak transcription	Lung	lung
32	chr10:45442200-45443200	Enhancers	GM12878-XiMat	blood
33	chr10:45442200-45443400	Weak transcription	Duodenum Mucosa	Duodenum
34	chr10:45442200-45443600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
35	chr10:45442400-45442800	Weak transcription	Left Ventricle	heart
36	chr10:45442400-45443000	Enhancers	HSMMtube	muscle
37	chr10:45442400-45443200	Enhancers	Monocytes-CD14+_RO01746	blood
38	chr10:45442400-45444600	Weak transcription	Fetal Intestine Large	intestine
39	chr10:45442400-45446200	Enhancers	Primary B cells from cord blood	blood
40	chr10:45442400-45451000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
41	chr10:45442400-45453400	Weak transcription	Osteobl	bone
42	chr10:45442600-45443000	Weak transcription	Stomach Mucosa	stomach
43	chr10:45442800-45446200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
44	chr10:45442800-45446200	Enhancers	Primary hematopoietic stem cells short term culture	blood
45	chr10:45442800-45446600	Enhancers	Fetal Muscle Trunk	muscle
46	chr10:45442800-45446800	Enhancers	Left Ventricle	heart
47	chr10:45443000-45443200	Enhancers	Brain Inferior Temporal Lobe	brain
48	chr10:45443000-45443400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
49	chr10:45443000-45443400	Enhancers	Esophagus	oesophagus
50	chr10:45443000-45443400	Flanking Active TSS	HSMMtube	muscle

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links