Variant report

Variant	nsv1035306
Chromosome Location	chr11:71326941-71523551
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3148)
CpG islands
(count:2567)
Chromatin interactive
region (count:11)
LncRNA
region (count:15)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3148 , 50 per page) page: 1 2 3 4 5 6 7 ... 63

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:71499570-71499575	HepG2	liver:	n/a	n/a
2	ARID3A	chr11:71417122-71417426	K562	blood:	n/a	n/a
3	ARID3A	chr11:71511545-71511692	K562	blood:	n/a	n/a
4	ARID3A	chr11:71460269-71460401	K562	blood:	n/a	n/a
5	ARID3A	chr11:71423994-71424313	K562	blood:	n/a	n/a
6	ARID3A	chr11:71410234-71410262	K562	blood:	n/a	n/a
7	ARID3A	chr11:71423449-71423649	K562	blood:	n/a	n/a
8	ARID3A	chr11:71454526-71454806	K562	blood:	n/a	n/a
9	ARID3A	chr11:71475957-71476045	K562	blood:	n/a	n/a
10	ARID3A	chr11:71416385-71416810	K562	blood:	n/a	n/a
11	ATF1	chr11:71454569-71454834	K562	blood:	n/a	n/a
12	ATF1	chr11:71417251-71417305	K562	blood:	n/a	n/a
13	ATF1	chr11:71328834-71328851	K562	blood:	n/a	n/a
14	ATF1	chr11:71511476-71511666	K562	blood:	n/a	n/a
15	ATF1	chr11:71475791-71476199	K562	blood:	n/a	n/a
16	ATF1	chr11:71483232-71483430	K562	blood:	n/a	n/a
17	ATF1	chr11:71430611-71430715	K562	blood:	n/a	n/a
18	ATF3	chr11:71511454-71511674	GM12878	blood:	n/a	n/a
19	ATF3	chr11:71511455-71511719	H1-hESC	embryonic stem cell:	n/a	n/a
20	ATF3	chr11:71390992-71391254	K562	blood:	n/a	n/a
21	ATF3	chr11:71416472-71416725	K562	blood:	n/a	n/a
22	BACH1	chr11:71421452-71421711	H1-hESC	embryonic stem cell:	n/a	n/a
23	BATF	chr11:71421908-71422351	GM12878	blood:	n/a	n/a
24	BATF	chr11:71407057-71407555	GM12878	blood:	n/a	n/a
25	BATF	chr11:71499406-71499609	GM12878	blood:	n/a	n/a
26	BATF	chr11:71376106-71376750	GM12878	blood:	n/a	n/a
27	BATF	chr11:71364307-71364538	GM12878	blood:	n/a	n/a
28	BATF	chr11:71398772-71399069	GM12878	blood:	n/a	n/a
29	BATF	chr11:71428825-71429020	GM12878	blood:	n/a	chr11:71428919-71428927
30	BATF	chr11:71426836-71427105	GM12878	blood:	n/a	n/a
31	BATF	chr11:71498902-71499183	GM12878	blood:	n/a	n/a
32	BATF	chr11:71421930-71422331	GM12878	blood:	n/a	n/a
33	BATF	chr11:71425014-71425933	GM12878	blood:	n/a	n/a
34	BATF	chr11:71503748-71504008	GM12878	blood:	n/a	n/a
35	BATF	chr11:71499485-71499773	GM12878	blood:	n/a	n/a
36	BATF	chr11:71445516-71445843	GM12878	blood:	n/a	n/a
37	BATF	chr11:71364018-71364247	GM12878	blood:	n/a	chr11:71364110-71364121
38	BATF	chr11:71426864-71427152	GM12878	blood:	n/a	n/a
39	BATF	chr11:71456494-71456680	GM12878	blood:	n/a	n/a
40	BATF	chr11:71511440-71511763	GM12878	blood:	n/a	n/a
41	BATF	chr11:71428726-71429101	GM12878	blood:	n/a	chr11:71428919-71428927
42	BATF	chr11:71445512-71445867	GM12878	blood:	n/a	n/a
43	BATF	chr11:71496443-71496643	GM12878	blood:	n/a	n/a
44	BATF	chr11:71421266-71421667	GM12878	blood:	n/a	n/a
45	BATF	chr11:71425385-71425877	GM12878	blood:	n/a	n/a
46	BATF	chr11:71376144-71376697	GM12878	blood:	n/a	n/a
47	BATF	chr11:71398779-71399009	GM12878	blood:	n/a	n/a
48	BATF	chr11:71457474-71457675	GM12878	blood:	n/a	n/a
49	BCL11A	chr11:71421911-71422277	GM12878	blood:	n/a	n/a
50	BCL11A	chr11:71511333-71511561	GM12878	blood:	n/a	n/a

(count:2567 , 50 per page) page: 1 2 3 4 5 6 7 ... 52

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:71327353-71327403	HEK293	kidney:	embryo
2	chr11:71462549-71462599	HL-60	blood:	n/a
3	chr11:71418204-71418254	NHDF-neo	bronchial:	n/a
4	chr11:71457160-71457210	CMK	blood:	n/a
5	chr11:71352122-71352172	HPAEpiC	pulmonary alveolar:	n/a
6	chr11:71327353-71327403	HEK293	kidney:	embryo
7	chr11:71462549-71462599	HL-60	blood:	n/a
8	chr11:71418204-71418254	NHDF-neo	bronchial:	n/a
9	chr11:71457160-71457210	CMK	blood:	n/a
10	chr11:71352122-71352172	HPAEpiC	pulmonary alveolar:	n/a
11	chr11:71498715-71498765	Hela-S3	cervix:	n/a
12	chr11:71498715-71498765	LNCaP	prostate:	n/a
13	chr11:71346528-71346578	GM06990	blood:	n/a
14	chr11:71498202-71498252	Jurkat	blood:	n/a
15	chr11:71327380-71327430	K562	blood:	n/a
16	chr11:71421279-71421329	BJ	skin:	n/a
17	chr11:71421279-71421329	AG09319	gingival:	n/a
18	chr11:71498609-71498659	ProgFib	skin:	n/a
19	chr11:71418204-71418254	HCF	heart:	n/a
20	chr11:71498715-71498765	Caco-2	colon:	n/a
21	chr11:71493933-71493983	GM12891	blood:	n/a
22	chr11:71420467-71420517	NHDF-neo	bronchial:	n/a
23	chr11:71417713-71417763	AoSMC	blood vessel:	n/a
24	chr11:71350888-71350938	PANC-1	pancreas:	n/a
25	chr11:71498609-71498659	HepG2	liver:	n/a
26	chr11:71498609-71498659	Caco-2	colon:	n/a
27	chr11:71462582-71462632	Hepatocyte	liver:	n/a
28	chr11:71497575-71497625	Jurkat	blood:	n/a
29	chr11:71456947-71456997	HCPEpiC	choroid plexus:	n/a
30	chr11:71350346-71350396	HEK293	kidney:	embryo
31	chr11:71353991-71354041	HPAEpiC	pulmonary alveolar:	n/a
32	chr11:71340352-71340402	AG04449	skin:	fetal
33	chr11:71498715-71498765	Hepatocyte	liver:	n/a
34	chr11:71327885-71327935	HNPCEpiC	eye:	n/a
35	chr11:71499006-71499056	HRPEpiC	eye:	n/a
36	chr11:71340288-71340338	PANC-1	pancreas:	n/a
37	chr11:71420947-71420997	HRCEpiC	kidney:	n/a
38	chr11:71522461-71522511	NH-A	brain:	n/a
39	chr11:71502816-71502866	U87	brain:	n/a
40	chr11:71340288-71340338	NHBE	bronchial:	n/a
41	chr11:71327897-71327947	NHDF-neo	bronchial:	n/a
42	chr11:71499006-71499056	K562	blood:	n/a
43	chr11:71499117-71499167	HCM	heart:	n/a
44	chr11:71456947-71456997	HepG2	liver:	n/a
45	chr11:71497575-71497625	ProgFib	skin:	n/a
46	chr11:71497688-71497738	HPAEpiC	pulmonary alveolar:	n/a
47	chr11:71327380-71327430	T-47D	breast:	n/a
48	chr11:71349753-71349803	AG09309	skin:	n/a
49	chr11:71346528-71346578	CMK	blood:	n/a
50	chr11:71499117-71499167	PANC-1	pancreas:	n/a

(count:11 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr11:71489714..71493464-chr11:71497648..71499552,3	MCF-7	breast:
2	chr11:67572484..67573077-chr11:71498421..71498985,2	HCT-116	colon:
3	chr11:71498340..71499087-chr19:18391666..18392636,2	Hela-S3	cervix:
4	chr11:71498107..71498639-chr3:75483883..75484386,2	Hela-S3	cervix:
5	chr11:71349980..71350709-chr11:71511135..71512071,2	K562	blood:
6	chr11:71349980..71350709-chr11:71511135..71512071,2	K562	blood:
7	chr11:71499803..71501328-chr11:71502237..71504426,2	K562	blood:
8	chr11:71499803..71501328-chr11:71502237..71504426,2	K562	blood:
9	chr11:3442224..3443750-chr11:71497854..71499382,2	MCF-7	breast:
10	chr11:71502585..71504558-chr11:71523085..71525009,2	MCF-7	breast:
11	chr11:71498143..71498944-chr16:5147397..5148064,2	Hela-S3	cervix:

(count:15 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-AP000867.1-1	chr11:71415223-71415306	ENSG00000254972
2	lnc-RP11-849H4.2.1-1	chr11:71517696-71518702	NONHSAT022713
3	lnc-RP11-849H4.2.1-1	chr11:71518637-71518702	ENSG00000248671.3
4	lnc-FAM86C1-5	chr11:71392883-71393202	expRegAs_chr11_7367_+
5	lnc-FAM86C1-4	chr11:71393417-71393825	expRegAs_chr11_7370_+
6	lnc-FAM86C1-1	chr11:71433219-71433273	NONHSAT022701
7	lnc-AP000867.1-1	chr11:71416406-71416450	ENSG00000254972
8	lnc-AP000867.1-4	chr11:71401499-71401703	NONHSAT022697
9	lnc-FAM86C1-1	chr11:71425421-71425604	NONHSAT022701
10	lnc-AP000867.1-1	chr11:71412314-71412531	ENSG00000254972
11	lnc-AP000867.1-2	chr11:71421533-71421627	ENSG00000254504.1
12	lnc-FAM86C1-2	chr11:71395710-71396117	expRegAs_chr11_7374_+
13	lnc-FAM86C1-3	chr11:71394183-71394998	expRegAs_chr11_7373_+
14	lnc-AP000867.1-2	chr11:71383721-71384047	ENSG00000254504.1
15	lnc-FAM86C1-1	chr11:71422786-71422863	NONHSAT022701

No data

Variant related genes	Relation type
FAM86C1	TF binding region
OR7E4P	TF binding region
ENSG00000255415	TF binding region
ENSG00000223235	TF binding region
ENSG00000264091	TF binding region
ENSG00000254805	TF binding region
ALG1L9P	TF binding region
ENPP7P8	TF binding region
ENSG00000254972	TF binding region
ENSG00000221458	TF binding region
RPS3AP41	TF binding region
FAM86C1	CpG island
OR7E4P	CpG island
ENSG00000255415	CpG island
ENSG00000223235	CpG island
ENSG00000264091	CpG island
ENSG00000254805	CpG island
ALG1L9P	CpG island
ENPP7P8	CpG island
ENSG00000254972	CpG island
ENSG00000221458	CpG island
RPS3AP41	CpG island
ENSG00000130522	chromatin interactions
ENSG00000166492	chromatin interactions
ENSG00000118894	chromatin interactions
ENSG00000244026	chromatin interactions
ENSG00000160172	chromatin interactions
ENSG00000248671	chromatin interactions
ENSG00000158483	chromatin interactions

Extended variants
information (count: 10448 )
Associated
traits (count: 107 )

Variant overlapped rSNPs/rCNVs (count:10448 , 50 per page) page: 1 2 3 4 5 6 7 ... 209

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs549062969	chr11:71326950-71326951	Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
2	rs551365965	chr11:71326965-71326966	Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
3	rs11827597	chr11:71326968-71326969	Enhancers Bivalent Enhancer	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
4	rs141295780	chr11:71326970-71326971	Enhancers Bivalent Enhancer	n/a	n/a	Overlapped CNVs	n/a
5	rs527475304	chr11:71327015-71327016	Enhancers	n/a	n/a	Overlapped CNVs	n/a
6	rs571403876	chr11:71327016-71327017	Enhancers	n/a	n/a	Overlapped CNVs	n/a
7	rs538932480	chr11:71327023-71327024	Enhancers	n/a	n/a	Overlapped CNVs	n/a
8	rs540798034	chr11:71327044-71327045	Enhancers	n/a	n/a	Overlapped CNVs	n/a
9	rs367683475	chr11:71327057-71327058	Enhancers	n/a	n/a	Overlapped CNVs	n/a
10	rs557014935	chr11:71327073-71327074	Enhancers	n/a	n/a	Overlapped CNVs	n/a
11	rs575171329	chr11:71327085-71327086	Enhancers	n/a	n/a	Overlapped CNVs	n/a
12	rs146992081	chr11:71327095-71327096	Enhancers	n/a	n/a	Overlapped CNVs	n/a
13	rs554686618	chr11:71327121-71327122	Enhancers	n/a	n/a	Overlapped CNVs	n/a
14	rs148001191	chr11:71327124-71327125	Enhancers	n/a	n/a	Overlapped CNVs	n/a
15	rs541612380	chr11:71327125-71327126	Enhancers	n/a	n/a	Overlapped CNVs	n/a
16	rs201250181	chr11:71327129-71327130	Enhancers	n/a	n/a	Overlapped CNVs	n/a
17	rs559902256	chr11:71327140-71327141	Enhancers	n/a	n/a	Overlapped CNVs	n/a
18	rs549511020	chr11:71327141-71327142	Enhancers	n/a	n/a	Overlapped CNVs	n/a
19	rs567715408	chr11:71327158-71327159	Enhancers	n/a	n/a	Overlapped CNVs	n/a
20	rs112566497	chr11:71327159-71327160	Enhancers	n/a	n/a	Overlapped CNVs	n/a
21	rs538265018	chr11:71327169-71327170	Enhancers	n/a	n/a	Overlapped CNVs	n/a
22	rs563873237	chr11:71327183-71327184	Enhancers	n/a	n/a	Overlapped CNVs	n/a
23	rs187476259	chr11:71327185-71327186	Enhancers	n/a	n/a	Overlapped CNVs	n/a
24	rs199830603	chr11:71327187-71327188	Enhancers	n/a	n/a	Overlapped CNVs	n/a
25	rs191972444	chr11:71327353-71327354	Inactive region	CpG island	1 gene(s)	Overlapped CNVs	n/a
26	rs79665698	chr11:71327356-71327357	Inactive region	CpG island	1 gene(s)	Overlapped CNVs	n/a
27	rs183346433	chr11:71327357-71327358	Inactive region	CpG island	1 gene(s)	Overlapped CNVs	n/a
28	rs150507072	chr11:71327364-71327365	Inactive region	CpG island	1 gene(s)	Overlapped CNVs	n/a
29	rs542565334	chr11:71327379-71327380	Inactive region	CpG island	1 gene(s)	Overlapped CNVs	n/a
30	rs201193998	chr11:71327393-71327394	Inactive region	CpG island	1 gene(s)	Overlapped CNVs	n/a
31	rs560955714	chr11:71327400-71327401	Inactive region	CpG island	1 gene(s)	Overlapped CNVs	n/a
32	rs528506773	chr11:71327411-71327412	Inactive region	CpG island	1 gene(s)	Overlapped CNVs	n/a
33	rs187573585	chr11:71327413-71327414	Inactive region	CpG island	1 gene(s)	Overlapped CNVs	n/a
34	rs113901241	chr11:71327414-71327415	Inactive region	CpG island	1 gene(s)	Overlapped CNVs	n/a
35	rs78313134	chr11:71327885-71327886	Inactive region	CpG island	1 gene(s)	Overlapped CNVs	n/a
36	rs76950473	chr11:71327895-71327896	Inactive region	CpG island	1 gene(s)	Overlapped CNVs	n/a
37	rs536475472	chr11:71327897-71327898	Inactive region	CpG island	1 gene(s)	Overlapped CNVs	n/a
38	rs370835335	chr11:71327924-71327925	Inactive region	CpG island	1 gene(s)	Overlapped CNVs	n/a
39	rs73532198	chr11:71327936-71327937	Inactive region	CpG island	1 gene(s)	Overlapped CNVs	n/a
40	rs79941887	chr11:71328839-71328840	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
41	rs561355349	chr11:71329073-71329074	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
42	rs572336434	chr11:71329076-71329077	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
43	rs202111014	chr11:71329085-71329086	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
44	rs200243654	chr11:71329086-71329087	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
45	rs200356531	chr11:71329100-71329101	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
46	rs201397746	chr11:71329101-71329102	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
47	rs112982853	chr11:71329112-71329113	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
48	rs201680054	chr11:71329124-71329125	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
49	rs199828061	chr11:71329157-71329158	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a
50	rs376417493	chr11:71329159-71329160	Inactive region	TF binding region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:107)

Disease	PMID	Source
Medulloblastoma	21979893	CNVD
Gastric cancer	17908304	CNVD
Multiple myeloma	20724749	CNVD
Wilms tumour	21544195	CNVD
Autism	22495311	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Glioblastoma multiforme	21138945	CNVD
Acute myeloid leukemia	20729466	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Cancer	21637783	CNVD
Acute myeloid leukemia	16864856	CNVD
Chronic lymphocytic leukemia	21795749	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Neuroblastoma	21484798	CNVD
Ewing''s sarcoma	21437220	CNVD
Oral cancer	21386901	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	20837533	CNVD
Breast cancer	21264507	CNVD
Cervical cancer	21063398	CNVD
Glioblastoma multiforme	19960244	CNVD
Liposarcoma	21253554	CNVD
Neuroblastoma	18923524	CNVD
Neuroblastoma	18664255	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Neuroblastoma	17533364	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Lung cancer	18438408	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Prostate cancer	18632612	CNVD
Smith-Lemli-Opitz syndrome	21572526	CNVD
Glioblastoma multiforme	21080181	CNVD
Multiple myeloma	16461302	CNVD
Cancer	16751803	CNVD
Seminomas	18059402	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Chordoma	21602918	CNVD
Metanephric adenoma	20802469	CNVD
Melanoma	18172304	CNVD
Breast cancer	21806811	CNVD
Breast cancer	22002566	CNVD
Ductal carcinoma	18381933	CNVD
Retinoblastoma	22278416	CNVD
Breast cancer	20953835	CNVD
oto-dental syndrome	17656375	CNVD
Asthma	21956041	CNVD
Breast cancer	17603634	CNVD
Ovarian neoplasms	16753589	CNVD
Non-small cell lung cancer	20864512	CNVD
Hepatocellular carcinoma	16750200	CNVD
Cervical cancer	21062161	CNVD
Breast cancer	21509527	CNVD
Breast cancer	17001317	CNVD
Oral squamous cell carcinoma	16619035	CNVD
Intracranial aneurysm	16715129	CNVD
Colorectal cancer	16272173	CNVD
Primary mediastinal b-cell lymphoma	17728785	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Colorectal cancer	16882699	CNVD
Berardinelli-seip congenital generalized lipodystrophy	17668395	CNVD
Spinal muscular atrophy	17668395	CNVD
Neonatal seizures	17668395	CNVD
Neonatal seizures	17668391	CNVD
Neuroticism	17667963	CNVD
Cancer	17916600	CNVD
Squamous cell cancer	19047905	CNVD
Multiple endocrine neoplasia type 1	19566914	CNVD
XY sex reversal	17503084	CNVD
Berardinelli-seip congenital generalized lipodystrophy	17668391	CNVD
Maculopathy	17646752	CNVD
Breast cancer	17899364	CNVD
Breast cancer	17157792	CNVD
Esophageal squamous carcinoma	18350619	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Breast cancer	21364760	CNVD
lymphocytic leukemia	21291569	CNVD
Myelofibrosis	22110671	CNVD
Ovarian clear cell carcinoma	19293255	CNVD
Cancer	22183965	CNVD
Melanoma	22183965	CNVD
Esophageal squamous carcinoma	18405350	CNVD
Breast cancer	16620391	CNVD
Multiple myeloma	17550852	CNVD
Neuroblastoma	18923191	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Chronic lymphocytic leukemia	22228453	CNVD
Multiple myeloma	16616336	CNVD
Urothelial cell carcinoma	18451213	CNVD
Leukoplakia	24403051	CNVD
Prostate cancer	17217626	CNVD
Cancer	22429812	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
small cell lung cancer	20016488	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD
Breast cancer	17142309	CNVD
Ovarian cancer	21781307	CNVD
Cancer	17440070	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD

Chromatin state (count:1204 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:71324600-71327000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr11:71325200-71327000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr11:71325600-71327200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr11:71325600-71327200	Enhancers	NHEK	skin
5	chr11:71325800-71327000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr11:71326400-71327000	Enhancers	HMEC	breast
7	chr11:71326600-71327000	Bivalent Enhancer	Breast Myoepithelial Primary Cells	Breast
8	chr11:71335200-71350400	Weak transcription	Right Atrium	heart
9	chr11:71336800-71337000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
10	chr11:71338600-71339000	Enhancers	Duodenum Mucosa	Duodenum
11	chr11:71344200-71350600	Weak transcription	Brain Inferior Temporal Lobe	brain
12	chr11:71346800-71347000	Bivalent Enhancer	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr11:71350000-71350200	Bivalent Enhancer	Primary T helper cells PMA-I stimulated	--
14	chr11:71350000-71350400	Enhancers	H9 Cell Line	embryonic stem cell
15	chr11:71350000-71350400	Bivalent Enhancer	Breast Myoepithelial Primary Cells	Breast
16	chr11:71350000-71350400	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
17	chr11:71350000-71350400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
18	chr11:71350000-71350400	Bivalent Enhancer	Primary T regulatory cells fromperipheralblood	blood
19	chr11:71350000-71350400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
20	chr11:71350000-71350400	Bivalent Enhancer	Duodenum Mucosa	Duodenum
21	chr11:71350000-71350400	Bivalent Enhancer	Fetal Muscle Leg	muscle
22	chr11:71350000-71350600	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
23	chr11:71350000-71350600	Enhancers	Primary B cells from peripheral blood	blood
24	chr11:71350000-71350600	Enhancers	Primary Natural Killer cells fromperipheralblood	blood
25	chr11:71350000-71350600	Bivalent Enhancer	Primary T killer naive cells fromperipheralblood	blood
26	chr11:71350000-71350800	Enhancers	Primary B cells from cord blood	blood
27	chr11:71350000-71351400	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
28	chr11:71350200-71350400	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
29	chr11:71350200-71350400	Enhancers	Primary T helper cells fromperipheralblood	blood
30	chr11:71350200-71350400	Bivalent Enhancer	Foreskin Keratinocyte Primary Cells skin03	Skin
31	chr11:71350200-71350400	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin01	Skin
32	chr11:71350200-71350400	Enhancers	Fetal Intestine Small	intestine
33	chr11:71350200-71350400	Enhancers	Right Ventricle	heart
34	chr11:71350200-71350600	Bivalent/Poised TSS	Foreskin Fibroblast Primary Cells skin01	Skin
35	chr11:71350200-71350800	Enhancers	Primary T helper naive cells from peripheral blood	blood
36	chr11:71350200-71350800	Active TSS	Fetal Brain Female	brain
37	chr11:71350200-71350800	Enhancers	Spleen	Spleen
38	chr11:71350200-71351200	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
39	chr11:71350400-71350600	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
40	chr11:71350400-71350600	Bivalent/Poised TSS	iPS DF 19.11 Cell Line	embryonic stem cell
41	chr11:71350400-71350600	Active TSS	Primary T helper 17 cells PMA-I stimulated	--
42	chr11:71350400-71350600	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
43	chr11:71350400-71350600	Active TSS	Muscle Satellite Cultured Cells	--
44	chr11:71350400-71350600	Active TSS	Adipose Nuclei	Adipose
45	chr11:71350400-71350600	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
46	chr11:71350400-71350600	Bivalent/Poised TSS	Colonic Mucosa	Colon
47	chr11:71350400-71350600	Bivalent/Poised TSS	Duodenum Mucosa	Duodenum
48	chr11:71350400-71350600	Active TSS	Esophagus	oesophagus
49	chr11:71350400-71350600	Bivalent/Poised TSS	Fetal Adrenal Gland	Adrenal Gland
50	chr11:71350400-71350600	Bivalent/Poised TSS	Fetal Muscle Leg	muscle

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links