Variant report

Variant nsv1035353
Chromosome Location chr12:38424982-38491004
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:158 , 50 per page) page: 1 2 3 4
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:38418200-38439600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr12:38424800-38425400 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
3 chr12:38433800-38435200 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
4 chr12:38436600-38441200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr12:38441200-38450200 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
6 chr12:38442200-38452200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
7 chr12:38442400-38450800 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
8 chr12:38443000-38448800 Weak transcription Right Atrium heart
9 chr12:38443400-38445800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
10 chr12:38443600-38445000 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
11 chr12:38443800-38444000 Bivalent Enhancer Stomach Smooth Muscle stomach
12 chr12:38443800-38444800 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
13 chr12:38443800-38444800 ZNF genes & repeats Primary T helper memory cells from peripheral blood 2 blood
14 chr12:38443800-38444800 ZNF genes & repeats Colonic Mucosa Colon
15 chr12:38443800-38444800 ZNF genes & repeats Skeletal Muscle Male skeletal muscle
16 chr12:38443800-38444800 ZNF genes & repeats Spleen Spleen
17 chr12:38443800-38445000 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr12:38443800-38445000 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
19 chr12:38443800-38445000 ZNF genes & repeats Primary T cells fromperipheralblood blood
20 chr12:38443800-38445000 ZNF genes & repeats Fetal Muscle Trunk muscle
21 chr12:38443800-38445000 ZNF genes & repeats Gastric stomach
22 chr12:38443800-38445200 ZNF genes & repeats hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr12:38443800-38445200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
24 chr12:38443800-38445600 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr12:38443800-38445800 ZNF genes & repeats iPS DF 19.11 Cell Line embryonic stem cell
26 chr12:38444400-38445200 ZNF genes & repeats H9 Cell Line embryonic stem cell
27 chr12:38444400-38445400 ZNF genes & repeats H1 Cell Line embryonic stem cell
28 chr12:38444600-38444800 ZNF genes & repeats ES-I3 Cell Line embryonic stem cell
29 chr12:38444600-38444800 Bivalent Enhancer Primary T helper naive cells fromperipheralblood blood
30 chr12:38444600-38444800 ZNF genes & repeats Colon Smooth Muscle Colon
31 chr12:38444600-38444800 Bivalent Enhancer Stomach Smooth Muscle stomach
32 chr12:38444600-38444800 Bivalent/Poised TSS NHEK skin
33 chr12:38444600-38445000 ZNF genes & repeats iPS-15b Cell Line embryonic stem cell
34 chr12:38444600-38445000 ZNF genes & repeats Esophagus oesophagus
35 chr12:38444800-38445000 Bivalent/Poised TSS Brain Substantia Nigra brain
36 chr12:38444800-38445200 Weak transcription Colon Smooth Muscle Colon
37 chr12:38444800-38448800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr12:38445000-38448600 Weak transcription Gastric stomach
39 chr12:38445600-38447000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr12:38445800-38447000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
41 chr12:38446000-38447000 ZNF genes & repeats Breast Myoepithelial Primary Cells Breast
42 chr12:38446400-38450600 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
43 chr12:38446600-38450400 ZNF genes & repeats H1 Cell Line embryonic stem cell
44 chr12:38446600-38450400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
45 chr12:38446800-38447200 Active TSS ES-I3 Cell Line embryonic stem cell
46 chr12:38446800-38449200 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
47 chr12:38447000-38447200 ZNF genes & repeats HUVEC blood vessel
48 chr12:38447000-38447200 Flanking Bivalent TSS/Enh K562 blood
49 chr12:38447000-38447200 Flanking Bivalent TSS/Enh NHEK skin
50 chr12:38447000-38447400 Flanking Bivalent TSS/Enh HepG2 liver

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