Variant report
Variant | nsv1035850 |
---|---|
Chromosome Location | chr12:38207030-38912512 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:4552)
- CpG islands (count:3483)
- Chromatin interactive region (count:47)
- LncRNA region (count:17)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr12:38778647-38778789 | HepG2 | liver: | n/a | n/a |
2 | ARID3A | chr12:38493896-38494086 | K562 | blood: | n/a | n/a |
3 | ARID3A | chr12:38710113-38710696 | HepG2 | liver: | n/a | chr12:38710204-38710220 chr12:38710205-38710221 |
4 | ARID3A | chr12:38482212-38482642 | K562 | blood: | n/a | n/a |
5 | ARID3A | chr12:38710301-38710555 | K562 | blood: | n/a | n/a |
6 | ARID3A | chr12:38543626-38543997 | K562 | blood: | n/a | n/a |
7 | ARID3A | chr12:38722185-38722490 | HepG2 | liver: | n/a | n/a |
8 | ARID3A | chr12:38518229-38518929 | HepG2 | liver: | n/a | n/a |
9 | ARID3A | chr12:38448696-38448896 | HepG2 | liver: | n/a | n/a |
10 | ARID3A | chr12:38722213-38722403 | K562 | blood: | n/a | n/a |
11 | ARID3A | chr12:38448701-38449068 | K562 | blood: | n/a | n/a |
12 | ARID3A | chr12:38532537-38532888 | HepG2 | liver: | n/a | n/a |
13 | ARID3A | chr12:38248444-38248820 | HepG2 | liver: | n/a | n/a |
14 | ATF1 | chr12:38592349-38592545 | K562 | blood: | n/a | n/a |
15 | ATF1 | chr12:38235844-38236214 | K562 | blood: | n/a | n/a |
16 | ATF1 | chr12:38258619-38258986 | K562 | blood: | n/a | n/a |
17 | ATF1 | chr12:38248442-38248819 | K562 | blood: | n/a | n/a |
18 | ATF1 | chr12:38710296-38710661 | K562 | blood: | n/a | n/a |
19 | ATF1 | chr12:38562455-38562511 | K562 | blood: | n/a | n/a |
20 | ATF1 | chr12:38449777-38450205 | K562 | blood: | n/a | n/a |
21 | ATF1 | chr12:38580930-38581004 | K562 | blood: | n/a | n/a |
22 | ATF1 | chr12:38457173-38457374 | K562 | blood: | n/a | n/a |
23 | ATF2 | chr12:38710293-38710713 | GM12878 | blood: | n/a | n/a |
24 | ATF2 | chr12:38744101-38745067 | GM12878 | blood: | n/a | n/a |
25 | ATF2 | chr12:38744225-38745089 | GM12878 | blood: | n/a | n/a |
26 | ATF2 | chr12:38710159-38710775 | GM12878 | blood: | n/a | n/a |
27 | ATF3 | chr12:38518161-38518657 | A549 | lung: | n/a | n/a |
28 | ATF3 | chr12:38450770-38451371 | A549 | lung: | n/a | n/a |
29 | ATF3 | chr12:38248534-38248701 | H1-hESC | embryonic stem cell: | n/a | n/a |
30 | ATF3 | chr12:38710223-38710780 | A549 | lung: | n/a | n/a |
31 | ATF3 | chr12:38248441-38248721 | H1-hESC | embryonic stem cell: | n/a | n/a |
32 | ATF3 | chr12:38710219-38710780 | A549 | lung: | n/a | n/a |
33 | BACH1 | chr12:38722036-38722207 | H1-hESC | embryonic stem cell: | n/a | n/a |
34 | BACH1 | chr12:38535652-38536024 | K562 | blood: | n/a | n/a |
35 | BACH1 | chr12:38444623-38444996 | K562 | blood: | n/a | n/a |
36 | BACH1 | chr12:38493592-38493998 | K562 | blood: | n/a | n/a |
37 | BACH1 | chr12:38445410-38445790 | K562 | blood: | n/a | n/a |
38 | BACH1 | chr12:38501131-38501616 | K562 | blood: | n/a | n/a |
39 | BACH1 | chr12:38778825-38779049 | H1-hESC | embryonic stem cell: | n/a | n/a |
40 | BACH1 | chr12:38541011-38541384 | K562 | blood: | n/a | n/a |
41 | BACH1 | chr12:38534226-38534319 | K562 | blood: | n/a | n/a |
42 | BACH1 | chr12:38483362-38483596 | K562 | blood: | n/a | n/a |
43 | BACH1 | chr12:38446968-38447169 | K562 | blood: | n/a | n/a |
44 | BACH1 | chr12:38361554-38361929 | K562 | blood: | n/a | n/a |
45 | BACH1 | chr12:38448694-38449069 | K562 | blood: | n/a | n/a |
46 | BACH1 | chr12:38543625-38544007 | K562 | blood: | n/a | n/a |
47 | BACH1 | chr12:38536600-38536974 | K562 | blood: | n/a | n/a |
48 | BATF | chr12:38341722-38341883 | GM12878 | blood: | n/a | n/a |
49 | BATF | chr12:38786453-38786734 | GM12878 | blood: | n/a | chr12:38786626-38786637 |
50 | BATF | chr12:38710371-38710641 | GM12878 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr12:38529156-38529206 | MCF-7 | breast: | n/a |
2 | chr12:38447636-38447686 | HCPEpiC | choroid plexus: | n/a |
3 | chr12:38532713-38532763 | NH-A | brain: | n/a |
4 | chr12:38547397-38547447 | HCM | heart: | n/a |
5 | chr12:38449206-38449256 | HL-60 | blood: | n/a |
6 | chr12:38551782-38551832 | ovcar-3 | ovarian: | n/a |
7 | chr12:38529156-38529206 | MCF-7 | breast: | n/a |
8 | chr12:38447636-38447686 | HCPEpiC | choroid plexus: | n/a |
9 | chr12:38532713-38532763 | NH-A | brain: | n/a |
10 | chr12:38547397-38547447 | HCM | heart: | n/a |
11 | chr12:38449206-38449256 | HL-60 | blood: | n/a |
12 | chr12:38551782-38551832 | ovcar-3 | ovarian: | n/a |
13 | chr12:38710604-38710654 | HUVEC | blood vessel: | n/a |
14 | chr12:38595863-38595913 | GM12892 | blood: | n/a |
15 | chr12:38493714-38493764 | NHDF-neo | bronchial: | n/a |
16 | chr12:38555558-38555608 | HRE | kidney: | n/a |
17 | chr12:38710604-38710654 | HRCEpiC | kidney: | n/a |
18 | chr12:38710491-38710541 | SK-N-MC | brain: | n/a |
19 | chr12:38535710-38535760 | HL-60 | blood: | n/a |
20 | chr12:38448956-38449006 | NHBE | bronchial: | n/a |
21 | chr12:38558124-38558174 | GM19239 | blood: | n/a |
22 | chr12:38724551-38724601 | AG09309 | skin: | n/a |
23 | chr12:38545214-38545264 | AG04449 | skin: | fetal |
24 | chr12:38556969-38557019 | MCF-7 | breast: | n/a |
25 | chr12:38710424-38710474 | NH-A | brain: | n/a |
26 | chr12:38546326-38546376 | U87 | brain: | n/a |
27 | chr12:38531077-38531127 | HepG2 | liver: | n/a |
28 | chr12:38552636-38552686 | HRE | kidney: | n/a |
29 | chr12:38447948-38447998 | A549 | lung: | n/a |
30 | chr12:38710452-38710502 | ovcar-3 | ovarian: | n/a |
31 | chr12:38551782-38551832 | HCT-116 | colon: | n/a |
32 | chr12:38710452-38710502 | PrEC | prostate: | n/a |
33 | chr12:38447948-38447998 | HRCEpiC | kidney: | n/a |
34 | chr12:38548782-38548832 | HEEpiC | esophagus: | n/a |
35 | chr12:38710154-38710204 | AG10803 | skin: | n/a |
36 | chr12:38551782-38551832 | ProgFib | skin: | n/a |
37 | chr12:38806793-38806843 | PFSK-1 | brain: | n/a |
38 | chr12:38557350-38557400 | AG09319 | gingival: | n/a |
39 | chr12:38556969-38557019 | ovcar-3 | ovarian: | n/a |
40 | chr12:38555256-38555306 | HPAEpiC | pulmonary alveolar: | n/a |
41 | chr12:38710452-38710502 | HNPCEpiC | eye: | n/a |
42 | chr12:38595404-38595454 | SK-N-SH | brain: | n/a |
43 | chr12:38447636-38447686 | HAEpiC | amniotic membrane: | n/a |
44 | chr12:38544936-38544986 | HL-60 | blood: | n/a |
45 | chr12:38447229-38447279 | CMK | blood: | n/a |
46 | chr12:38531077-38531127 | GM12878 | blood: | n/a |
47 | chr12:38595601-38595651 | SK-N-SH | brain: | n/a |
48 | chr12:38595404-38595454 | BJ | skin: | n/a |
49 | chr12:38447636-38447686 | HCM | heart: | n/a |
50 | chr12:38557350-38557400 | T-47D | breast: | n/a |
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr12:38778961..38781578-chr12:38784417..38786236,2 | MCF-7 | breast: | |
2 | chr12:38778961..38781578-chr12:38784417..38786236,2 | MCF-7 | breast: | |
3 | chr12:38721916..38722780-chr12:39497511..39498068,2 | MCF-7 | breast: | |
4 | chr12:38535401..38535902-chr2:133016817..133017415,2 | MCF-7 | breast: | |
5 | chr12:38444870..38446430-chr16:33959034..33960923,3 | MCF-7 | breast: | |
6 | chr12:38542302..38543806-chr20:26188737..26191492,2 | K562 | blood: | |
7 | chr12:38843134..38845389-chr12:38847279..38849955,2 | MCF-7 | breast: | |
8 | chr12:38764399..38764899-chr18:71815043..71815544,2 | Hela-S3 | cervix: | |
9 | chr12:38637847..38640659-chr12:38643822..38646474,2 | K562 | blood: | |
10 | chr12:38845594..38847956-chr12:38851662..38853438,2 | K562 | blood: | |
11 | chr12:38722084..38722866-chr12:39667246..39667987,2 | MCF-7 | breast: | |
12 | chr12:38444870..38446396-chr2:133021688..133023192,2 | K562 | blood: | |
13 | chr12:38536304..38537296-chr14:88237622..88238153,2 | K562 | blood: | |
14 | chr12:38845594..38847956-chr12:38851662..38853438,2 | K562 | blood: | |
15 | chr12:38876753..38877648-chr6:116268599..116269448,2 | MCF-7 | breast: | |
16 | chr12:38837698..38839402-chr12:38841166..38843830,2 | K562 | blood: | |
17 | chr1:156185732..156186437-chr12:38543803..38544322,4 | MCF-7 | breast: | |
18 | chr12:38721798..38722714-chr12:39305427..39306254,2 | MCF-7 | breast: | |
19 | chr12:34241238..34243550-chr12:38853316..38855678,2 | MCF-7 | breast: | |
20 | chr12:38444829..38445449-chr2:133022690..133023552,2 | MCF-7 | breast: | |
21 | chr12:38447143..38447662-chr2:133026232..133026787,2 | MCF-7 | breast: | |
22 | chr1:156185862..156186566-chr12:38543820..38544329,3 | MCF-7 | breast: | |
23 | chr12:38843134..38845389-chr12:38847279..38849955,2 | MCF-7 | breast: | |
24 | chr12:38532267..38533149-chr12:38709875..38710612,2 | K562 | blood: | |
25 | chr12:38444806..38446368-chr16:33959419..33960990,2 | MCF-7 | breast: | |
26 | chr1:186105531..186106141-chr12:38883322..38883955,2 | MCF-7 | breast: | |
27 | chr12:38464739..38465619-chr4:45719335..45720093,2 | MCF-7 | breast: | |
28 | chr1:156184764..156186317-chr12:38543820..38545325,2 | K562 | blood: | |
29 | chr1:156185761..156186730-chr12:38543308..38544330,7 | MCF-7 | breast: | |
30 | chr12:34405769..34407368-chr12:38464924..38466718,2 | K562 | blood: | |
31 | chr12:38542306..38543824-chr20:26188496..26191492,2 | K562 | blood: | |
32 | chr12:38536776..38537298-chr14:88237597..88238190,6 | MCF-7 | breast: | |
33 | chr12:38637847..38640659-chr12:38643822..38646474,2 | K562 | blood: | |
34 | chr12:38444887..38445591-chr16:33959228..33959997,3 | MCF-7 | breast: | |
35 | chr1:156185820..156186795-chr12:38543314..38544329,6 | MCF-7 | breast: | |
36 | chr12:38837698..38839402-chr12:38841166..38843830,2 | K562 | blood: | |
37 | chr12:38450015..38451840-chr2:133028967..133030976,3 | MCF-7 | breast: | |
38 | chr1:156184890..156186421-chr12:38543820..38545329,2 | MCF-7 | breast: | |
39 | chr12:38543803..38545320-chr21:9824316..9826615,2 | K562 | blood: | |
40 | chr12:38543320..38543832-chr21:9825931..9826770,2 | K562 | blood: | |
41 | chr12:38532230..38532845-chr12:38709831..38710738,3 | MCF-7 | breast: | |
42 | chr12:38542325..38545309-chr16:33964713..33967583,2 | K562 | blood: | |
43 | chr12:38444306..38445077-chr21:37485779..37486279,2 | MCF-7 | breast: | |
44 | chr12:34175001..34175865-chr12:38710413..38711151,3 | HCT-116 | colon: | |
45 | chr12:38676913..38678502-chr12:38709612..38711993,2 | MCF-7 | breast: | |
46 | chr12:38444597..38445444-chr16:33958723..33959994,4 | MCF-7 | breast: | |
47 | chr12:38532568..38533113-chr12:39666750..39667387,2 | K562 | blood: |
(count:17 , 50 per page) page:
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No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-CPNE8-5 | chr12:38837923-38838124 | l_629_chr12:38821325-38838592_lung |
2 | lnc-CPNE8-7 | chr12:38472331-38472801 | NONHSAT027673 |
3 | lnc-ALG10B-6 | chr12:38449724-38450322 | NONHSAT027672 |
4 | lnc-ALG10B-3 | chr12:38836308-38836412 | NONHSAT027682 |
5 | lnc-CPNE8-5 | chr12:38821326-38822703 | l_629_chr12:38821325-38838592_lung |
6 | lnc-ALG10B-4 | chr12:38517498-38517593 | NONHSAT027675 |
7 | lnc-ALG10B-6 | chr12:38451526-38451849 | NONHSAT027672 |
8 | lnc-CPNE8-6 | chr12:38599188-38599814 | NONHSAT027678 |
9 | lnc-ALG10B-3 | chr12:38847317-38847776 | NONHSAT027683 |
10 | lnc-CPNE8-5 | chr12:38824250-38824373 | l_629_chr12:38821325-38838592_lung |
11 | lnc-CPNE8-8 | chr12:38447469-38447570 | NONHSAT027671 |
12 | lnc-CPNE8-5 | chr12:38832098-38832212 | l_629_chr12:38821325-38838592_lung |
13 | lnc-ALG10B-3 | chr12:38846321-38846419 | NONHSAT027683 |
14 | lnc-CPNE8-8 | chr12:38450354-38450755 | NONHSAT027671 |
15 | lnc-ALG10B-4 | chr12:38520814-38520995 | NONHSAT027675 |
16 | lnc-CPNE8-5 | chr12:38838505-38838592 | l_629_chr12:38821325-38838592_lung |
17 | lnc-ALG10B-3 | chr12:38847317-38847681 | NONHSAT027682 |
No data |
No data |
Variant related genes | Relation type |
---|---|
RNA5SP359 | TF binding region |
ENSG00000257173 | TF binding region |
TUBB8P5 | TF binding region |
ALG10B | TF binding region |
ENSG00000253016 | TF binding region |
ENSG00000257292 | TF binding region |
ENSG00000258278 | TF binding region |
ENSG00000266333 | TF binding region |
ENSG00000258360 | TF binding region |
RNA5SP358 | TF binding region |
ENSG00000256878 | TF binding region |
RNA5SP359 | CpG island |
ENSG00000257173 | CpG island |
TUBB8P5 | CpG island |
ALG10B | CpG island |
ENSG00000253016 | CpG island |
ENSG00000257292 | CpG island |
ENSG00000258278 | CpG island |
ENSG00000266333 | CpG island |
ENSG00000258360 | CpG island |
RNA5SP358 | CpG island |
ENSG00000256878 | CpG island |
ENSG00000264462 | chromatin interactions |
ENSG00000200434 | chromatin interactions |
ENSG00000175548 | chromatin interactions |
ENSG00000227195 | chromatin interactions |
ENSG00000264063 | chromatin interactions |
ENSG00000141665 | chromatin interactions |
ENSG00000139133 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs551098697 | chr12:38207030-38207031 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
2 | rs570992226 | chr12:38207039-38207040 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
3 | rs533567918 | chr12:38207041-38207042 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
4 | rs370350214 | chr12:38207049-38207050 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
5 | rs553372387 | chr12:38207063-38207064 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
6 | rs573265766 | chr12:38207082-38207083 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
7 | rs374619600 | chr12:38207121-38207122 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
8 | rs536555279 | chr12:38207127-38207128 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
9 | rs186652712 | chr12:38207128-38207129 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
10 | rs191498330 | chr12:38207138-38207139 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
11 | rs544867329 | chr12:38207142-38207143 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
12 | rs534423235 | chr12:38207155-38207156 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
13 | rs578129219 | chr12:38207170-38207171 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
14 | rs372939947 | chr12:38207212-38207213 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
15 | rs540704375 | chr12:38207227-38207228 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
16 | rs555678910 | chr12:38207234-38207235 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
17 | rs181710780 | chr12:38207266-38207267 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
18 | rs186417189 | chr12:38207285-38207286 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
19 | rs376579965 | chr12:38207298-38207299 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
20 | rs544539382 | chr12:38207305-38207306 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
21 | rs61621942 | chr12:38207306-38207307 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
22 | rs111918852 | chr12:38207308-38207309 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
23 | rs191223773 | chr12:38207363-38207364 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
24 | rs199919994 | chr12:38207381-38207382 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
25 | rs562905968 | chr12:38207383-38207384 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
26 | rs183391418 | chr12:38207385-38207386 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
27 | rs145982431 | chr12:38207386-38207387 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
28 | rs567256086 | chr12:38207417-38207418 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
29 | rs545115980 | chr12:38207430-38207431 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
30 | rs556462137 | chr12:38207441-38207442 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
31 | rs11495648 | chr12:38207450-38207451 | Weak transcription | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
32 | rs187469907 | chr12:38207451-38207452 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
33 | rs558810236 | chr12:38207457-38207458 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
34 | rs201810382 | chr12:38207505-38207506 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
35 | rs112859905 | chr12:38207513-38207514 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
36 | rs201122707 | chr12:38207517-38207518 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
37 | rs397849884 | chr12:38207518-38207519 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
38 | rs78490406 | chr12:38207520-38207521 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
39 | rs809739 | chr12:38207525-38207526 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
40 | rs11179245 | chr12:38207586-38207587 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
41 | rs554264571 | chr12:38207642-38207643 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
42 | rs55962590 | chr12:38207672-38207673 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
43 | rs372468290 | chr12:38207673-38207674 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
44 | rs12423082 | chr12:38207683-38207684 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
45 | rs561721743 | chr12:38207692-38207693 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
46 | rs563222473 | chr12:38207704-38207705 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
47 | rs529195982 | chr12:38207713-38207714 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
48 | rs28507968 | chr12:38207717-38207718 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
49 | rs377004850 | chr12:38207746-38207747 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
50 | rs55745285 | chr12:38207768-38207769 | Weak transcription | n/a | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Chronic lymphocytic leukemia | 21546498 | CNVD |
Seminomas | 18059402 | CNVD |
Wilms tumour | 21544195 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Lung cancer | 20668451 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Testicular germ cell tumor | 18059402 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Malaria | 21533027 | CNVD |
Chronic lymphocytic leukemia | 22228453 | CNVD |
Basal cell lymphoma | 17053054 | CNVD |
Chronic lymphocytic leukemia | 21670202 | CNVD |
Ewing''s sarcoma | 17952124 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Autism | 22495311 | CNVD |
Cancer | 20164919 | CNVD |
Neurodevelopmental disorder | 22521361 | CNVD |
Breast cancer | 21509527 | CNVD |
Acute lymphoblastic leukemia | 21390130 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
T-cell prolymphocytic leukemia | 17713554 | CNVD |
Renal cell carcinoma | 18194544 | CNVD |
Breast cancer | 21949216 | CNVD |
Carcinoma ex pleomorphic adenoma | 18828159 | CNVD |
Acute myeloid leukemia | 16864856 | CNVD |
Cancer | 21637783 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Renal cell carcinoma | 19461508 | CNVD |
Burkitt''s lymphoma | 18698080 | CNVD |
Astrocytoma | 17387387 | CNVD |
Breast cancer | 21264507 | CNVD |
Glioblastoma multiforme | 19960244 | CNVD |
Gastrointestinal stromal cancer | 20470368 | CNVD |
Adenoid cystic carcinoma | 17372589 | CNVD |
Breast cancer | 21364760 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Breast cancer | 17603634 | CNVD |
Cancer | 21183584 | CNVD |
Hirschsprung''s Disease | 21712996 | CNVD |
Lissencephaly | 21572526 | CNVD |
Lung cancer | 18438408 | CNVD |
Acute myeloid leukemia | 21251322 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Pancreatic ductal adenocarcinoma | 19077451 | CNVD |
Autism | 20858243 | CNVD |
Malignant peripheral nerve sheath tumor | 18522746 | CNVD |
Adenoid cystic carcinoma | 18698036 | CNVD |
Breast cancer | 19602461 | CNVD |
Breast cancer | 17899364 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Breast cancer | 22522925 | CNVD |
Osteosarcoma | 21215367 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Cancer | 21272361 | CNVD |
Autism | 20531469 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Non-syndromic sensorineural hearing loss | 19587683 | CNVD |
Cancer | 20164920 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr12:38206400-38207400 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
2 | chr12:38207400-38209800 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
3 | chr12:38209800-38213200 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
4 | chr12:38209800-38215800 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
5 | chr12:38210000-38210600 | ZNF genes & repeats | Adipose Nuclei | Adipose |
6 | chr12:38210000-38210800 | ZNF genes & repeats | iPS-18 Cell Line | embryonic stem cell |
7 | chr12:38210200-38210600 | ZNF genes & repeats | ES-I3 Cell Line | embryonic stem cell |
8 | chr12:38210200-38210600 | ZNF genes & repeats | Primary T killer memory cells from peripheral blood | blood |
9 | chr12:38216400-38216800 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
10 | chr12:38219600-38224600 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
11 | chr12:38228800-38229800 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
12 | chr12:38229200-38231400 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
13 | chr12:38230400-38238400 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
14 | chr12:38230400-38240600 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
15 | chr12:38231600-38232000 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
16 | chr12:38232000-38232200 | ZNF genes & repeats | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
17 | chr12:38233000-38243400 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
18 | chr12:38234200-38234600 | ZNF genes & repeats | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
19 | chr12:38234400-38234600 | ZNF genes & repeats | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
20 | chr12:38234400-38234600 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
21 | chr12:38234400-38234600 | ZNF genes & repeats | Muscle Satellite Cultured Cells | -- |
22 | chr12:38234400-38234600 | ZNF genes & repeats | NH-A | brain |
23 | chr12:38234400-38234800 | ZNF genes & repeats | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
24 | chr12:38234400-38234800 | ZNF genes & repeats | Primary T helper naive cells from peripheral blood | blood |
25 | chr12:38234400-38234800 | ZNF genes & repeats | Primary T helper cells PMA-I stimulated | -- |
26 | chr12:38234400-38234800 | ZNF genes & repeats | Brain Hippocampus Middle | brain |
27 | chr12:38234400-38237800 | ZNF genes & repeats | Liver | Liver |
28 | chr12:38234600-38235800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
29 | chr12:38234800-38235800 | Weak transcription | NH-A | brain |
30 | chr12:38235800-38236000 | Enhancers | NH-A | brain |
31 | chr12:38235800-38236200 | ZNF genes & repeats | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
32 | chr12:38238800-38242400 | ZNF genes & repeats | Liver | Liver |
33 | chr12:38242200-38249000 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
34 | chr12:38242600-38243400 | ZNF genes & repeats | Adipose Nuclei | Adipose |
35 | chr12:38242800-38243400 | ZNF genes & repeats | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
36 | chr12:38246600-38248400 | Weak transcription | Right Atrium | heart |
37 | chr12:38247800-38249000 | ZNF genes & repeats | Liver | Liver |
38 | chr12:38247800-38249000 | ZNF genes & repeats | Duodenum Smooth Muscle | Duodenum |
39 | chr12:38247800-38250000 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
40 | chr12:38248000-38249000 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
41 | chr12:38248200-38248400 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
42 | chr12:38248200-38248400 | Enhancers | Aorta | Aorta |
43 | chr12:38248200-38248400 | Enhancers | Thymus | Thymus |
44 | chr12:38248200-38248800 | ZNF genes & repeats | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
45 | chr12:38248200-38248800 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
46 | chr12:38248200-38248800 | ZNF genes & repeats | iPS-15b Cell Line | embryonic stem cell |
47 | chr12:38248200-38248800 | ZNF genes & repeats | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
48 | chr12:38248200-38248800 | ZNF genes & repeats | Primary B cells from peripheral blood | blood |
49 | chr12:38248200-38248800 | ZNF genes & repeats | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
50 | chr12:38248200-38248800 | ZNF genes & repeats | Pancreatic Islets | Pancreatic Islet |