No. |
Variant name |
Chromosome position |
Chromatin state |
Related regulatory elements |
Target genes |
Extended variants |
Associated traits |
1 |
rs558051846 |
chr10:42853683-42853684 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
2 |
rs571489772 |
chr10:42853753-42853754 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
3 |
rs533930625 |
chr10:42853816-42853817 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
4 |
rs553598231 |
chr10:42853843-42853844 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
5 |
rs530544102 |
chr10:42853864-42853865 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
6 |
rs573668090 |
chr10:42853875-42853876 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
7 |
rs192965844 |
chr10:42853884-42853885 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
8 |
rs199884644 |
chr10:42853885-42853886 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
9 |
rs200259982 |
chr10:42853947-42853948 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
10 |
rs73255636 |
chr10:42853993-42853994 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
11 |
rs542302605 |
chr10:42853995-42853996 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
12 |
rs202151786 |
chr10:42854010-42854011 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
13 |
rs189172231 |
chr10:42854012-42854013 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
14 |
rs534517863 |
chr10:42854018-42854019 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
15 |
rs192255885 |
chr10:42854039-42854040 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
16 |
rs183767504 |
chr10:42854041-42854042 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
17 |
rs137895466 |
chr10:42854049-42854050 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
18 |
rs533351317 |
chr10:42854054-42854055 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
19 |
rs540780074 |
chr10:42854055-42854056 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
20 |
rs373084060 |
chr10:42854063-42854064 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
21 |
rs377554807 |
chr10:42854066-42854067 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
22 |
rs371148999 |
chr10:42854072-42854073 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
23 |
rs560428199 |
chr10:42854115-42854116 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
24 |
rs529366527 |
chr10:42854116-42854117 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
25 |
rs549145027 |
chr10:42854117-42854118 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
26 |
rs569290737 |
chr10:42854136-42854137 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
27 |
rs75463823 |
chr10:42854137-42854138 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
28 |
rs144611825 |
chr10:42854166-42854167 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
29 |
rs148869588 |
chr10:42854168-42854169 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
30 |
rs187010955 |
chr10:42854184-42854185 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
31 |
rs149426584 |
chr10:42854196-42854197 |
Weak transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
32 |
rs201500420 |
chr10:42854243-42854244 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
33 |
rs371890868 |
chr10:42854252-42854253 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
34 |
rs372845033 |
chr10:42854269-42854270 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
35 |
rs571528935 |
chr10:42854271-42854272 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
36 |
rs533784962 |
chr10:42854333-42854334 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
37 |
rs553927459 |
chr10:42854486-42854487 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
38 |
rs199638738 |
chr10:42854492-42854493 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
39 |
rs191701873 |
chr10:42854500-42854501 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
40 |
rs117637361 |
chr10:42854523-42854524 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
41 |
rs60607776 |
chr10:42854608-42854609 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
n/a
|
42 |
rs575652288 |
chr10:42854653-42854654 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
43 |
rs184205510 |
chr10:42854708-42854709 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
44 |
rs558038168 |
chr10:42854756-42854757 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
45 |
rs140925451 |
chr10:42854763-42854764 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
46 |
rs200933627 |
chr10:42854766-42854767 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
47 |
rs57409564 |
chr10:42854767-42854768 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
48 |
rs150280672 |
chr10:42854768-42854769 |
Weak transcription ZNF genes & repeats Strong transcription
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
49 |
rs577914328 |
chr10:42854813-42854814 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
Overlapped CNVs
|
n/a
|
50 |
rs2466473 |
chr10:42854816-42854817 |
Weak transcription Strong transcription ZNF genes & repeats
|
n/a
|
n/a
|
LD-proxies of rSNPOverlapped rCNV
|
mRNA abundance
|