Variant report
Variant | nsv1035979 |
---|---|
Chromosome Location | chr14:19438599-20420227 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:4849)
- CpG islands (count:4766)
- Chromatin interactive region (count:4)
- LncRNA region (count:252)
- Mature miRNA region (count: 0)
- miRNA target sites (count:1)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr14:20387153-20387455 | HepG2 | liver: | n/a | n/a |
2 | ARID3A | chr14:19614565-19614964 | K562 | blood: | n/a | n/a |
3 | ARID3A | chr14:20346241-20346527 | K562 | blood: | n/a | n/a |
4 | ARID3A | chr14:20346227-20346537 | HepG2 | liver: | n/a | n/a |
5 | ATF1 | chr14:20388271-20388560 | K562 | blood: | n/a | n/a |
6 | ATF1 | chr14:19609027-19609227 | K562 | blood: | n/a | n/a |
7 | ATF1 | chr14:19697695-19697910 | K562 | blood: | n/a | n/a |
8 | ATF1 | chr14:20319622-20319703 | K562 | blood: | n/a | n/a |
9 | ATF1 | chr14:19461425-19461537 | K562 | blood: | n/a | n/a |
10 | ATF1 | chr14:19464826-19465023 | K562 | blood: | n/a | n/a |
11 | ATF1 | chr14:20374096-20374405 | K562 | blood: | n/a | n/a |
12 | ATF1 | chr14:19792967-19794009 | K562 | blood: | n/a | n/a |
13 | ATF1 | chr14:19614523-19614771 | K562 | blood: | n/a | n/a |
14 | ATF1 | chr14:19462190-19462538 | K562 | blood: | n/a | n/a |
15 | ATF1 | chr14:19795048-19796237 | K562 | blood: | n/a | n/a |
16 | ATF1 | chr14:20325048-20325100 | K562 | blood: | n/a | n/a |
17 | ATF1 | chr14:19450073-19450214 | K562 | blood: | n/a | n/a |
18 | ATF1 | chr14:19610591-19610826 | K562 | blood: | n/a | n/a |
19 | ATF1 | chr14:19619825-19620010 | K562 | blood: | n/a | n/a |
20 | ATF3 | chr14:19614578-19614850 | K562 | blood: | n/a | n/a |
21 | BACH1 | chr14:19462184-19462510 | K562 | blood: | n/a | n/a |
22 | BACH1 | chr14:19438368-19438886 | K562 | blood: | n/a | n/a |
23 | BACH1 | chr14:19614506-19614753 | K562 | blood: | n/a | n/a |
24 | BACH1 | chr14:20348120-20348235 | K562 | blood: | n/a | n/a |
25 | BACH1 | chr14:19464051-19464239 | K562 | blood: | n/a | n/a |
26 | BACH1 | chr14:19795663-19796213 | K562 | blood: | n/a | n/a |
27 | BACH1 | chr14:19608951-19609223 | K562 | blood: | n/a | n/a |
28 | BATF | chr14:19541408-19541756 | GM12878 | blood: | n/a | n/a |
29 | BATF | chr14:19653590-19653843 | GM12878 | blood: | n/a | n/a |
30 | BATF | chr14:20085953-20086237 | GM12878 | blood: | n/a | n/a |
31 | BATF | chr14:19548118-19548363 | GM12878 | blood: | n/a | n/a |
32 | BATF | chr14:20131255-20131487 | GM12878 | blood: | n/a | n/a |
33 | BATF | chr14:19827024-19827305 | GM12878 | blood: | n/a | n/a |
34 | BATF | chr14:19541484-19541694 | GM12878 | blood: | n/a | n/a |
35 | BATF | chr14:19637495-19637851 | GM12878 | blood: | n/a | chr14:19637679-19637690 |
36 | BATF | chr14:19921485-19921738 | GM12878 | blood: | n/a | n/a |
37 | BATF | chr14:20026256-20026650 | GM12878 | blood: | n/a | n/a |
38 | BATF | chr14:20025214-20025459 | GM12878 | blood: | n/a | n/a |
39 | BATF | chr14:19986920-19987123 | GM12878 | blood: | n/a | n/a |
40 | BATF | chr14:19637509-19637829 | GM12878 | blood: | n/a | chr14:19637679-19637690 |
41 | BATF | chr14:19546952-19547321 | GM12878 | blood: | n/a | n/a |
42 | BATF | chr14:19937503-19937859 | GM12878 | blood: | n/a | chr14:19937698-19937709 |
43 | BATF | chr14:19937525-19937845 | GM12878 | blood: | n/a | chr14:19937698-19937709 |
44 | BATF | chr14:19487460-19487744 | GM12878 | blood: | n/a | n/a |
45 | BATF | chr14:19586478-19586681 | GM12878 | blood: | n/a | n/a |
46 | BATF | chr14:20031700-20032016 | GM12878 | blood: | n/a | n/a |
47 | BATF | chr14:19748478-19748726 | GM12878 | blood: | n/a | n/a |
48 | BATF | chr14:19548036-19548546 | GM12878 | blood: | n/a | n/a |
49 | BATF | chr14:20025031-20025541 | GM12878 | blood: | n/a | n/a |
50 | BCL11A | chr14:19821581-19821893 | GM12878 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr14:19614829-19614879 | AG09309 | skin: | n/a |
2 | chr14:20012038-20012088 | NHBE | bronchial: | n/a |
3 | chr14:20215980-20216030 | AG04449 | skin: | fetal |
4 | chr14:19746900-19746950 | HNPCEpiC | eye: | n/a |
5 | chr14:19887082-19887132 | SK-N-SH_RA | brain: | n/a |
6 | chr14:19855384-19855434 | H1-hESC | embryonic stem cell: | embryo |
7 | chr14:20020024-20020074 | NH-A | brain: | n/a |
8 | chr14:19625820-19625870 | AG09319 | gingival: | n/a |
9 | chr14:19614829-19614879 | AG09309 | skin: | n/a |
10 | chr14:20012038-20012088 | NHBE | bronchial: | n/a |
11 | chr14:20215980-20216030 | AG04449 | skin: | fetal |
12 | chr14:19746900-19746950 | HNPCEpiC | eye: | n/a |
13 | chr14:19887082-19887132 | SK-N-SH_RA | brain: | n/a |
14 | chr14:19855384-19855434 | H1-hESC | embryonic stem cell: | embryo |
15 | chr14:20020024-20020074 | NH-A | brain: | n/a |
16 | chr14:19625820-19625870 | AG09319 | gingival: | n/a |
17 | chr14:19643599-19643649 | AG04449 | skin: | fetal |
18 | chr14:20137365-20137415 | ProgFib | skin: | n/a |
19 | chr14:20295616-20295666 | NB4 | blood: | n/a |
20 | chr14:19625154-19625204 | AG04450 | lung: | fetal |
21 | chr14:20147652-20147702 | BJ | skin: | n/a |
22 | chr14:19888327-19888377 | BJ | skin: | n/a |
23 | chr14:20215980-20216030 | Caco-2 | colon: | n/a |
24 | chr14:20147652-20147702 | MCF10A-Er-Src | breast: | n/a |
25 | chr14:20295005-20295055 | HCF | heart: | n/a |
26 | chr14:19962440-19962490 | AoSMC | blood vessel: | n/a |
27 | chr14:19925080-19925130 | SK-N-MC | brain: | n/a |
28 | chr14:20148125-20148175 | GM19239 | blood: | n/a |
29 | chr14:19888327-19888377 | A549 | lung: | n/a |
30 | chr14:19626001-19626051 | SK-N-SH_RA | brain: | n/a |
31 | chr14:20020762-20020812 | Caco-2 | colon: | n/a |
32 | chr14:19626001-19626051 | AoSMC | blood vessel: | n/a |
33 | chr14:19950047-19950097 | T-47D | breast: | n/a |
34 | chr14:19614541-19614591 | HRE | kidney: | n/a |
35 | chr14:19719117-19719167 | Hela-S3 | cervix: | n/a |
36 | chr14:20136693-20136743 | H1-hESC | embryonic stem cell: | embryo |
37 | chr14:20135228-20135278 | ProgFib | skin: | n/a |
38 | chr14:19602855-19602905 | MCF10A-Er-Src | breast: | n/a |
39 | chr14:20403239-20403289 | SKMC | muscle: | n/a |
40 | chr14:19625154-19625204 | SK-N-SH_RA | brain: | n/a |
41 | chr14:19625820-19625870 | HepG2 | liver: | n/a |
42 | chr14:19888327-19888377 | HCPEpiC | choroid plexus: | n/a |
43 | chr14:19600442-19600492 | AG04450 | lung: | fetal |
44 | chr14:19597077-19597127 | MCF10A-Er-Src | breast: | n/a |
45 | chr14:19890087-19890137 | HEK293 | kidney: | embryo |
46 | chr14:20403239-20403289 | HNPCEpiC | eye: | n/a |
47 | chr14:19614829-19614879 | HRE | kidney: | n/a |
48 | chr14:20403239-20403289 | GM19239 | blood: | n/a |
49 | chr14:19626001-19626051 | ECC-1 | luminal epithelium: | n/a |
50 | chr14:20136822-20136872 | PFSK-1 | brain: | n/a |
(count:4 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr14:20382435..20385861-chr14:20389212..20390807,3 | K562 | blood: | |
2 | chr14:20378405..20379102-chr22:33621834..33622612,2 | MCF-7 | breast: | |
3 | chr14:20382435..20385861-chr14:20389212..20390807,3 | K562 | blood: | |
4 | chr14:20330082..20332945-chr14:20336237..20338891,2 | K562 | blood: |
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-POTEG-4 | chr14:19680591-19680685 | ENSG00000225210 |
2 | lnc-POTEG-4 | chr14:19650061-19650126 | ENSG00000225210 |
3 | lnc-POTEM-2 | chr14:19894700-19894794 | ENSG00000244306 |
4 | lnc-POTEG-4 | chr14:19683692-19684834 | ENSG00000225210 |
5 | lnc-POTEG-4 | chr14:19650060-19650126 | ENSG00000225210 |
6 | lnc-POTEM-2 | chr14:19925240-19925300 | ENSG00000244306 |
7 | lnc-POTEG-4 | chr14:19691355-19691701 | ENSG00000225210 |
8 | lnc-POTEM-2 | chr14:19925240-19925333 | NONHSAT140152 |
9 | lnc-POTEG-3 | chr14:19639008-19639483 | NONHSAT035465 |
10 | lnc-POTEM-3 | chr14:19858667-19861377 | ENSG00000249549 |
11 | lnc-POTEG-4 | chr14:19691355-19692916 | NR_110526 |
12 | lnc-POTEM-8 | chr14:19563712-19564808 | NR_046571 |
13 | lnc-POTEM-12 | chr14:19806437-19807415 | NONHSAT035495 |
14 | lnc-POTEG-4 | chr14:19650021-19650126 | ENSG00000225210 |
15 | lnc-OR4N2-4 | chr14:19894369-19894691 | ENSG00000215394 |
16 | lnc-POTEM-2 | chr14:19921359-19921470 | ENSG00000244306 |
17 | lnc-POTEM-2 | chr14:19884775-19884897 | ENSG00000244306 |
18 | lnc-POTEM-2 | chr14:19883543-19884029 | ENSG00000244306 |
19 | lnc-OR4N2-3 | chr14:20008836-20010958 | ENSG00000258276 |
20 | lnc-POTEG-4 | chr14:19680595-19681519 | ENSG00000225210 |
21 | lnc-POTEM-1 | chr14:19955880-19955945 | ENSG00000257931 |
22 | lnc-POTEM-2 | chr14:19921359-19921470 | NONHSAT035520 |
23 | lnc-POTEG-4 | chr14:19650055-19650126 | ENSG00000225210 |
24 | lnc-POTEM-6 | chr14:19887445-19887497 | ENSG00000257898.1 |
25 | lnc-POTEM-2 | chr14:19921359-19921470 | NONHSAT140152 |
26 | lnc-POTEM-2 | chr14:19872436-19872514 | ENSG00000244306 |
27 | lnc-POTEM-2 | chr14:19925240-19925345 | ENSG00000244306 |
28 | lnc-POTEG-4 | chr14:19650021-19650126 | ENSG00000225210 |
29 | lnc-POTEG-3 | chr14:19630574-19630835 | NONHSAT035465 |
30 | lnc-OR4N2-3 | chr14:20006913-20007358 | NR_110505 |
31 | lnc-POTEG-4 | chr14:19652244-19652354 | NR_110526 |
32 | lnc-POTEM-2 | chr14:19925240-19925332 | ENSG00000244306 |
33 | lnc-OR4N2-1 | chr14:20150010-20150118 | ENSG00000257395 |
34 | lnc-POTEG-4 | chr14:19653893-19654004 | ENSG00000225210 |
35 | lnc-POTEM-2 | chr14:19925240-19925334 | NR_110526 |
36 | lnc-POTEG-4 | chr14:19656089-19656224 | ENSG00000225210 |
37 | lnc-POTEM-1 | chr14:19944559-19944820 | ENSG00000257931 |
38 | lnc-POTEM-2 | chr14:19919492-19919629 | ENSG00000244306 |
39 | lnc-POTEG-7 | chr14:19595933-19596023 | NONHSAT035463 |
40 | lnc-POTEM-2 | chr14:19921591-19921705 | NONHSAT035520 |
41 | lnc-POTEM-2 | chr14:19921359-19921390 | NONHSAT035499 |
42 | lnc-POTEM-2 | chr14:19919492-19919629 | NR_110526 |
43 | lnc-POTEG-4 | chr14:19650061-19650126 | ENSG00000225210 |
44 | lnc-POTEG-4 | chr14:19650032-19650126 | NR_110526 |
45 | lnc-POTEG-4 | chr14:19680595-19680685 | ENSG00000225210 |
46 | lnc-POTEG-4 | chr14:19653893-19654004 | NR_110526 |
47 | lnc-POTEM-2 | chr14:19919138-19919273 | ENSG00000244306 |
48 | lnc-POTEM-7 | chr14:19670480-19671105 | ENSG00000228294 |
49 | lnc-POTEM-2 | chr14:19880596-19880882 | ENSG00000244306 |
50 | lnc-POTEM-2 | chr14:19912015-19913438 | ENSG00000244306 |
No data |
(count:1 , 50 per page) page:
1
No. | miRNA target gene | miRNA name | Chromosome Location | mirBase accession |
---|---|---|---|---|
1 | POTEG | hsa-miR-26b-5p | chr14:19563442-19563464 |
Variant related genes | Relation type |
---|---|
ENSG00000259016 | TF binding region |
OR4K5 | TF binding region |
GRAMD4P3 | TF binding region |
ENSG00000244306 | TF binding region |
ENSG00000257142 | TF binding region |
ENSG00000258265 | TF binding region |
ENSG00000257558 | TF binding region |
ENSG00000259069 | TF binding region |
OR4K4P | TF binding region |
ENSG00000257884 | TF binding region |
ENSG00000258324 | TF binding region |
OR4K3 | TF binding region |
ARHGAP42P4 | TF binding region |
ENSG00000238492 | TF binding region |
OR4K16P | TF binding region |
ENSG00000257573 | TF binding region |
ENSG00000257846 | TF binding region |
BMS1P18 | TF binding region |
OR11H2 | TF binding region |
ENSG00000257357 | TF binding region |
ENSG00000257868 | TF binding region |
OR4N2 | TF binding region |
ENSG00000258314 | TF binding region |
OR11H13P | TF binding region |
ENSG00000258027 | TF binding region |
OR4K1 | TF binding region |
ENSG00000258198 | TF binding region |
MED15P6 | TF binding region |
RNU6-1239P | TF binding region |
OR4M1 | TF binding region |
BMS1P17 | TF binding region |
ENSG00000258781 | TF binding region |
ENSG00000258252 | TF binding region |
NF1P4 | TF binding region |
OR11K2P | TF binding region |
ENSG00000257891 | TF binding region |
ENSG00000257395 | TF binding region |
OR4N1P | TF binding region |
ENSG00000257493 | TF binding region |
OR4Q3 | TF binding region |
ENSG00000258276 | TF binding region |
ENSG00000271632 | TF binding region |
MED15P1 | TF binding region |
OR4H12P | TF binding region |
ENSG00000257931 | TF binding region |
ENSG00000257635 | TF binding region |
OR4K6P | TF binding region |
ENSG00000239200 | TF binding region |
ENSG00000225210 | TF binding region |
ENSG00000257310 | TF binding region |
GRAMD4P4 | TF binding region |
ENSG00000257224 | TF binding region |
ENSG00000257751 | TF binding region |
RNU6-1268P | TF binding region |
ENSG00000257749 | TF binding region |
ENSG00000258188 | TF binding region |
ENSG00000257977 | TF binding region |
ENSG00000257432 | TF binding region |
POTEM | TF binding region |
OR4K2 | TF binding region |
POTEG | TF binding region |
DUXAP10 | TF binding region |
ENSG00000259016 | CpG island |
OR4K5 | CpG island |
GRAMD4P3 | CpG island |
ENSG00000244306 | CpG island |
ENSG00000257142 | CpG island |
ENSG00000258265 | CpG island |
ENSG00000257558 | CpG island |
ENSG00000259069 | CpG island |
OR4K4P | CpG island |
ENSG00000257884 | CpG island |
ENSG00000258324 | CpG island |
OR4K3 | CpG island |
ARHGAP42P4 | CpG island |
ENSG00000238492 | CpG island |
OR4K16P | CpG island |
ENSG00000257573 | CpG island |
ENSG00000257846 | CpG island |
BMS1P18 | CpG island |
OR11H2 | CpG island |
ENSG00000257357 | CpG island |
ENSG00000257868 | CpG island |
OR4N2 | CpG island |
ENSG00000258314 | CpG island |
OR11H13P | CpG island |
ENSG00000258027 | CpG island |
OR4K1 | CpG island |
ENSG00000258198 | CpG island |
MED15P6 | CpG island |
RNU6-1239P | CpG island |
OR4M1 | CpG island |
BMS1P17 | CpG island |
ENSG00000258781 | CpG island |
ENSG00000258252 | CpG island |
NF1P4 | CpG island |
OR11K2P | CpG island |
ENSG00000257891 | CpG island |
ENSG00000257395 | CpG island |
OR4N1P | CpG island |
ENSG00000257493 | CpG island |
OR4Q3 | CpG island |
ENSG00000258276 | CpG island |
ENSG00000271632 | CpG island |
MED15P1 | CpG island |
OR4H12P | CpG island |
ENSG00000257931 | CpG island |
ENSG00000257635 | CpG island |
OR4K6P | CpG island |
ENSG00000239200 | CpG island |
ENSG00000225210 | CpG island |
ENSG00000257310 | CpG island |
GRAMD4P4 | CpG island |
ENSG00000257224 | CpG island |
ENSG00000257751 | CpG island |
RNU6-1268P | CpG island |
ENSG00000257749 | CpG island |
ENSG00000258188 | CpG island |
ENSG00000257977 | CpG island |
ENSG00000257432 | CpG island |
POTEM | CpG island |
OR4K2 | CpG island |
POTEG | CpG island |
DUXAP10 | CpG island |
ENSG00000176290 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs552553173 | chr14:19438615-19438616 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
2 | rs577005789 | chr14:19438636-19438637 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
3 | rs537884600 | chr14:19438645-19438646 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
4 | rs555955661 | chr14:19438674-19438675 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
5 | rs568161254 | chr14:19438752-19438753 | ZNF genes & repeats | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
6 | rs28655231 | chr14:19438771-19438772 | ZNF genes & repeats | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
7 | rs536405526 | chr14:19438791-19438792 | ZNF genes & repeats | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
8 | rs28628467 | chr14:19438793-19438794 | ZNF genes & repeats | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
9 | rs368846410 | chr14:19438795-19438796 | ZNF genes & repeats | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
10 | rs28605984 | chr14:19438800-19438801 | ZNF genes & repeats | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
11 | rs554744091 | chr14:19438836-19438837 | ZNF genes & repeats | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
12 | rs573147680 | chr14:19438843-19438844 | ZNF genes & repeats | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
13 | rs540513942 | chr14:19438900-19438901 | ZNF genes & repeats | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
14 | rs28540056 | chr14:19438914-19438915 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
15 | rs559236001 | chr14:19438922-19438923 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
16 | rs112894871 | chr14:19438980-19438981 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
17 | rs28583759 | chr14:19439006-19439007 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
18 | rs189395682 | chr14:19439029-19439030 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
19 | rs28706434 | chr14:19439030-19439031 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
20 | rs544617438 | chr14:19439046-19439047 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
21 | rs28737273 | chr14:19439067-19439068 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
22 | rs562808026 | chr14:19439068-19439069 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
23 | rs530228849 | chr14:19439086-19439087 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
24 | rs368279398 | chr14:19439109-19439110 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
25 | rs181387232 | chr14:19439124-19439125 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
26 | rs560388560 | chr14:19439134-19439135 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
27 | rs112965624 | chr14:19439149-19439150 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
28 | rs527524341 | chr14:19439153-19439154 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
29 | rs552487887 | chr14:19439154-19439155 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
30 | rs570753921 | chr14:19439191-19439192 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
31 | rs372157774 | chr14:19439512-19439513 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
32 | rs537810213 | chr14:19439530-19439531 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
33 | rs556525481 | chr14:19439531-19439532 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
34 | rs574934629 | chr14:19439646-19439647 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
35 | rs542335962 | chr14:19439647-19439648 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
36 | rs112350946 | chr14:19439684-19439685 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
37 | rs371308971 | chr14:19439699-19439700 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
38 | rs560606571 | chr14:19439733-19439734 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
39 | rs142845257 | chr14:19439756-19439757 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
40 | rs200978278 | chr14:19439787-19439788 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
41 | rs28562403 | chr14:19441681-19441682 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
42 | rs200270610 | chr14:19441689-19441690 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
43 | rs568721806 | chr14:19441737-19441738 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
44 | rs374780898 | chr14:19441781-19441782 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
45 | rs117187404 | chr14:19441831-19441832 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
46 | rs201363031 | chr14:19441834-19441835 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
47 | rs115800344 | chr14:19441847-19441848 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
48 | rs60801548 | chr14:19441848-19441849 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
49 | rs376433001 | chr14:19441849-19441850 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
50 | rs371143192 | chr14:19441850-19441851 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Cancer | 20164920 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Retinoblastoma | 21504564 | CNVD |
High-proliferative meningiomas | 17937814 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Autism | 22495311 | CNVD |
Cone-rod dystrophy | 18421352 | CNVD |
T-cell acute lymphoblastic leukemia | 20065082 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Non-small cell lung cancer | 21044232 | CNVD |
Renal cell carcinoma | 19461508 | CNVD |
Cancer | 21637783 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Melanoma | 18172304 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Oral cancer | 21386901 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 21264507 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Breast cancer | 17899364 | CNVD |
Colorectal cancer | 16774939 | CNVD |
Neuroblastoma | 19435921 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Monoclonal gammopathy of undetermined significance | 17077331 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Schizophrenia | 20967226 | CNVD |
Autism | 19287141 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Urothelial carcinoma | 21177765 | CNVD |
Breast cancer | 17142309 | CNVD |
Rett syndrome | 21593744 | CNVD |
Breast cancer | 20369283 | CNVD |
Ovarian clear cell carcinoma | 21343371 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Incontinentia Pigmenti | 22033527 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Alzheimer''s disease | 21482944 | CNVD |
Mental retardation | 19951919 | CNVD |
Neuroblastoma | 21899760 | CNVD |
Cutaneous T-cell lymphoma | 21881587 | CNVD |
Heart disease | 21282601 | CNVD |
Esophageal cancer | 20955586 | CNVD |
Neurodevelopmental disorder | 22521361 | CNVD |
Lung cancer | 16773561 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Cancer | 17440070 | CNVD |
Breast cancer | 16272173 | CNVD |
Oral squamous cell carcinoma | 17134496 | CNVD |
Epilepsy | 20736978 | CNVD |
Mental retardation | 20736978 | CNVD |
severe speech impairment | 20736978 | CNVD |
speech impairment | 20736978 | CNVD |
Gastrointestinal stromal cancer | 16982739 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Breast cancer | 21364760 | CNVD |
Oligozoospermia | 20877625 | CNVD |
Sertoli-cell only syndrome | 20877625 | CNVD |
Williams Syndrome | 20824207 | CNVD |
Developmental delay | 21147756 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Lung cancer | 18438408 | CNVD |
Bladder cancer | 21909424 | CNVD |
Gastrointestinal stromal cancer | 20818650 | CNVD |
Renal cell carcinoma | 21668985 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Breast cancer | 22522925 | CNVD |
Prostate cancer | 18632612 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Ependymoma | 20639864 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Non-syndromic sensorineural hearing loss | 19587683 | CNVD |
Glioma | 20126413 | CNVD |
Pancreatic ductal adenocarcinoma | 19077451 | CNVD |
Schizophrenia | 23813976 | CNVD |
Chronic myeloid leukemia | 20724749 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Breast cancer | 21509527 | CNVD |
Amyotrophic lateral sclerosis | 20685689 | CNVD |
Autism | 20531469 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Ovarian cancer | 21720365 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr14:19435400-19439200 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
2 | chr14:19444400-19444800 | ZNF genes & repeats | Foreskin Fibroblast Primary Cells skin02 | Skin |
3 | chr14:19444400-19445200 | ZNF genes & repeats | Fetal Lung | lung |
4 | chr14:19444400-19445800 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
5 | chr14:19444400-19446000 | Active TSS | Fetal Heart | heart |
6 | chr14:19445000-19445200 | ZNF genes & repeats | iPS DF 6.9 Cell Line | embryonic stem cell |
7 | chr14:19462400-19462800 | ZNF genes & repeats | Fetal Kidney | kidney |
8 | chr14:19500000-19500200 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
9 | chr14:19597000-19597600 | ZNF genes & repeats | iPS DF 6.9 Cell Line | embryonic stem cell |
10 | chr14:19597200-19597600 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
11 | chr14:19607400-19609600 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
12 | chr14:19608600-19609200 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
13 | chr14:19610800-19612800 | Weak transcription | Fetal Lung | lung |
14 | chr14:19611000-19611200 | Enhancers | Lung | lung |
15 | chr14:19611200-19612800 | Weak transcription | Lung | lung |
16 | chr14:19612600-19615200 | Weak transcription | Right Atrium | heart |
17 | chr14:19612800-19613400 | ZNF genes & repeats | Fetal Kidney | kidney |
18 | chr14:19612800-19613400 | ZNF genes & repeats | Fetal Lung | lung |
19 | chr14:19612800-19613400 | ZNF genes & repeats | Lung | lung |
20 | chr14:19613000-19613200 | ZNF genes & repeats | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
21 | chr14:19613000-19613200 | ZNF genes & repeats | Gastric | stomach |
22 | chr14:19613000-19613200 | Bivalent Enhancer | K562 | blood |
23 | chr14:19613000-19613400 | ZNF genes & repeats | H1 Derived Mesenchymal Stem Cells | ES cell derived |
24 | chr14:19613000-19613400 | ZNF genes & repeats | H9 Cell Line | embryonic stem cell |
25 | chr14:19613000-19613400 | ZNF genes & repeats | iPS DF 6.9 Cell Line | embryonic stem cell |
26 | chr14:19613000-19613400 | ZNF genes & repeats | Fetal Brain Male | brain |
27 | chr14:19613000-19613400 | ZNF genes & repeats | Pancreas | Pancrea |
28 | chr14:19613000-19615000 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
29 | chr14:19613400-19614200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
30 | chr14:19613400-19614400 | Weak transcription | Pancreas | Pancrea |
31 | chr14:19613400-19614600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
32 | chr14:19613400-19616200 | Weak transcription | Fetal Lung | lung |
33 | chr14:19613600-19614200 | Weak transcription | Lung | lung |
34 | chr14:19614200-19614800 | ZNF genes & repeats | iPS DF 6.9 Cell Line | embryonic stem cell |
35 | chr14:19614200-19614800 | Active TSS | K562 | blood |
36 | chr14:19614400-19614800 | ZNF genes & repeats | Foreskin Fibroblast Primary Cells skin01 | Skin |
37 | chr14:19614400-19614800 | ZNF genes & repeats | Foreskin Fibroblast Primary Cells skin02 | Skin |
38 | chr14:19614400-19614800 | Bivalent Enhancer | Lung | lung |
39 | chr14:19614400-19614800 | ZNF genes & repeats | Pancreas | Pancrea |
40 | chr14:19614400-19615000 | Bivalent/Poised TSS | A549 | lung |
41 | chr14:19614600-19614800 | ZNF genes & repeats | H1 Derived Mesenchymal Stem Cells | ES cell derived |
42 | chr14:19614600-19614800 | Bivalent/Poised TSS | Colon Smooth Muscle | Colon |
43 | chr14:19614600-19614800 | Bivalent Enhancer | Right Ventricle | heart |
44 | chr14:19614800-19616000 | Weak transcription | Pancreas | Pancrea |
45 | chr14:19619800-19620000 | Bivalent Enhancer | A549 | lung |
46 | chr14:19641200-19641400 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
47 | chr14:19641200-19641400 | Enhancers | K562 | blood |
48 | chr14:19641200-19641600 | Active TSS | A549 | lung |
49 | chr14:19641200-19641600 | Active TSS | HepG2 | liver |
50 | chr14:19641600-19642800 | Weak transcription | HepG2 | liver |