Variant report

Variant	nsv1036173
Chromosome Location	chr15:55547689-55812194
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:4688)
CpG islands
(count:4767)
Chromatin interactive
region (count:241)
LncRNA
region (count:15)
Mature miRNA
region (count: 2)
miRNA target
sites (count:4)

(count:4688 , 50 per page) page: 1 2 3 4 5 6 7 ... 94

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:55699681-55700995	HepG2	liver:	n/a	chr15:55699936-55699952
2	ARID3A	chr15:55790421-55790685	HepG2	liver:	n/a	n/a
3	ARID3A	chr15:55571287-55572489	K562	blood:	n/a	n/a
4	ARID3A	chr15:55772283-55772392	HepG2	liver:	n/a	n/a
5	ARID3A	chr15:55576575-55577009	K562	blood:	n/a	n/a
6	ARID3A	chr15:55611806-55612064	HepG2	liver:	n/a	n/a
7	ARID3A	chr15:55711482-55711586	HepG2	liver:	n/a	n/a
8	ARID3A	chr15:55806152-55806285	K562	blood:	n/a	n/a
9	ARID3A	chr15:55582683-55582974	HepG2	liver:	n/a	n/a
10	ARID3A	chr15:55574357-55574917	K562	blood:	n/a	n/a
11	ARID3A	chr15:55552870-55553285	HepG2	liver:	n/a	n/a
12	ARID3A	chr15:55700139-55701084	K562	blood:	n/a	n/a
13	ARID3A	chr15:55688544-55689215	K562	blood:	n/a	n/a
14	ARID3A	chr15:55582501-55582999	K562	blood:	n/a	n/a
15	ARID3A	chr15:55611213-55612063	K562	blood:	n/a	n/a
16	ARID3A	chr15:55654793-55654993	HepG2	liver:	n/a	n/a
17	ARID3A	chr15:55611067-55611566	HepG2	liver:	n/a	n/a
18	ARID3A	chr15:55695766-55696116	HepG2	liver:	n/a	n/a
19	ARID3A	chr15:55550744-55550788	K562	blood:	n/a	n/a
20	ARID3A	chr15:55693945-55694278	K562	blood:	n/a	n/a
21	ARID3A	chr15:55571700-55572175	HepG2	liver:	n/a	n/a
22	ARID3A	chr15:55559634-55560031	K562	blood:	n/a	n/a
23	ARID3A	chr15:55578355-55578439	K562	blood:	n/a	n/a
24	ARID3A	chr15:55694987-55696143	K562	blood:	n/a	n/a
25	ARID3A	chr15:55662471-55662715	HepG2	liver:	n/a	n/a
26	ATF1	chr15:55612137-55612498	K562	blood:	n/a	n/a
27	ATF1	chr15:55700302-55701186	K562	blood:	n/a	n/a
28	ATF1	chr15:55695695-55696130	K562	blood:	n/a	n/a
29	ATF1	chr15:55578747-55579084	K562	blood:	n/a	n/a
30	ATF1	chr15:55731955-55732174	K562	blood:	n/a	n/a
31	ATF1	chr15:55574440-55574824	K562	blood:	n/a	n/a
32	ATF1	chr15:55611017-55611627	K562	blood:	n/a	n/a
33	ATF1	chr15:55571782-55572252	K562	blood:	n/a	n/a
34	ATF2	chr15:55611262-55611615	H1-hESC	embryonic stem cell:	n/a	n/a
35	ATF2	chr15:55569066-55569831	GM12878	blood:	n/a	n/a
36	ATF2	chr15:55571619-55572737	GM12878	blood:	n/a	n/a
37	ATF2	chr15:55700338-55700728	H1-hESC	embryonic stem cell:	n/a	n/a
38	ATF2	chr15:55610849-55611625	GM12878	blood:	n/a	n/a
39	ATF2	chr15:55582700-55583050	H1-hESC	embryonic stem cell:	n/a	n/a
40	ATF2	chr15:55582132-55582686	GM12878	blood:	n/a	n/a
41	ATF2	chr15:55568824-55569817	GM12878	blood:	n/a	n/a
42	ATF2	chr15:55700143-55700984	GM12878	blood:	n/a	n/a
43	ATF2	chr15:55581834-55583029	GM12878	blood:	n/a	n/a
44	ATF2	chr15:55610860-55611517	GM12878	blood:	n/a	n/a
45	ATF2	chr15:55547721-55548440	GM12878	blood:	n/a	n/a
46	ATF2	chr15:55571687-55572736	GM12878	blood:	n/a	n/a
47	ATF2	chr15:55700234-55700505	GM12878	blood:	n/a	n/a
48	ATF3	chr15:55611094-55611636	A549	lung:	n/a	n/a
49	ATF3	chr15:55574419-55574817	K562	blood:	n/a	n/a
50	ATF3	chr15:55582555-55583026	A549	lung:	n/a	n/a

(count:4767 , 50 per page) page: 1 2 3 4 5 6 7 ... 96

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:55604363-55604413	GM12892	blood:	n/a
2	chr15:55700593-55700643	HepG2	liver:	n/a
3	chr15:55801069-55801119	MCF-7	breast:	n/a
4	chr15:55582159-55582209	NH-A	brain:	n/a
5	chr15:55790753-55790803	HNPCEpiC	eye:	n/a
6	chr15:55582808-55582858	GM06990	blood:	n/a
7	chr15:55582570-55582620	SK-N-SH	brain:	n/a
8	chr15:55616713-55616763	Jurkat	blood:	n/a
9	chr15:55611424-55611474	HCM	heart:	n/a
10	chr15:55604363-55604413	GM12892	blood:	n/a
11	chr15:55700593-55700643	HepG2	liver:	n/a
12	chr15:55801069-55801119	MCF-7	breast:	n/a
13	chr15:55582159-55582209	NH-A	brain:	n/a
14	chr15:55790753-55790803	HNPCEpiC	eye:	n/a
15	chr15:55582808-55582858	GM06990	blood:	n/a
16	chr15:55582570-55582620	SK-N-SH	brain:	n/a
17	chr15:55616713-55616763	Jurkat	blood:	n/a
18	chr15:55611424-55611474	HCM	heart:	n/a
19	chr15:55611321-55611371	HCM	heart:	n/a
20	chr15:55700780-55700830	GM06990	blood:	n/a
21	chr15:55665236-55665286	SK-N-MC	brain:	n/a
22	chr15:55581976-55582026	Caco-2	colon:	n/a
23	chr15:55788778-55788828	AG09319	gingival:	n/a
24	chr15:55608323-55608373	AoSMC	blood vessel:	n/a
25	chr15:55569533-55569583	GM12891	blood:	n/a
26	chr15:55564203-55564253	HCM	heart:	n/a
27	chr15:55790509-55790559	HAEpiC	amniotic membrane:	n/a
28	chr15:55700689-55700739	AoSMC	blood vessel:	n/a
29	chr15:55582494-55582544	PANC-1	pancreas:	n/a
30	chr15:55582394-55582444	Hela-S3	cervix:	n/a
31	chr15:55581420-55581470	MCF10A-Er-Src	breast:	n/a
32	chr15:55604363-55604413	ProgFib	skin:	n/a
33	chr15:55793864-55793914	MCF-7	breast:	n/a
34	chr15:55611424-55611474	A549	lung:	n/a
35	chr15:55582808-55582858	Caco-2	colon:	n/a
36	chr15:55700901-55700951	HL-60	blood:	n/a
37	chr15:55611305-55611355	AG04450	lung:	fetal
38	chr15:55611214-55611264	GM06990	blood:	n/a
39	chr15:55700471-55700521	SKMC	muscle:	n/a
40	chr15:55582248-55582298	HCT-116	colon:	n/a
41	chr15:55790675-55790725	SK-N-SH_RA	brain:	n/a
42	chr15:55611440-55611490	HAEpiC	amniotic membrane:	n/a
43	chr15:55793864-55793914	LNCaP	prostate:	n/a
44	chr15:55793864-55793914	HL-60	blood:	n/a
45	chr15:55805566-55805616	ovcar-3	ovarian:	n/a
46	chr15:55700768-55700818	MCF10A-Er-Src	breast:	n/a
47	chr15:55737718-55737768	HPAEpiC	pulmonary alveolar:	n/a
48	chr15:55790446-55790496	HRPEpiC	eye:	n/a
49	chr15:55611881-55611931	GM12892	blood:	n/a
50	chr15:55710020-55710070	HPAEpiC	pulmonary alveolar:	n/a

(count:241 , 50 per page) page: 1 2 3 4 5

No.	Distal block	Cell Line	Cell type
1	chr15:55698446..55701018-chr15:55709702..55712524,2	MCF-7	breast:
2	chr15:55608625..55613147-chr15:55698683..55702764,8	MCF-7	breast:
3	chr15:55487463..55489378-chr15:55611756..55613530,2	K562	blood:
4	chr15:55612195..55616185-chr15:55619905..55621792,3	MCF-7	breast:
5	chr15:55710896..55714133-chr15:55717457..55719591,3	K562	blood:
6	chr15:55696852..55699665-chr15:55712534..55714960,2	K562	blood:
7	chr15:55540071..55542542-chr15:55580150..55582152,2	K562	blood:
8	chr15:55607682..55613892-chr15:55697623..55703247,7	K562	blood:
9	chr15:55790459..55791055-chr21:48054984..48055756,2	HCT-116	colon:
10	chr15:55545068..55547245-chr15:55548982..55551880,2	MCF-7	breast:
11	chr15:55550859..55553459-chr15:55571024..55573794,2	K562	blood:
12	chr15:55510011..55511659-chr15:55574355..55576916,2	MCF-7	breast:
13	chr15:55646940..55648633-chr15:55651865..55653826,2	K562	blood:
14	chr10:75172931..75173840-chr15:55610781..55611418,2	Hela-S3	cervix:
15	chr15:55700044..55700555-chr15:65596754..65597469,2	Hela-S3	cervix:
16	chr1:28975054..28975618-chr15:55610819..55611592,2	Hela-S3	cervix:
17	chr1:222884982..222885886-chr15:55790504..55791243,2	Hela-S3	cervix:
18	chr15:55650827..55653650-chr15:55729879..55732717,2	K562	blood:
19	chr15:55580735..55582255-chr15:55582320..55584429,2	MCF-7	breast:
20	chr15:55659246..55661372-chr15:55665281..55667567,2	K562	blood:
21	chr15:55611231..55613781-chr15:55650210..55652100,2	MCF-7	breast:
22	chr15:55610040..55612568-chr15:55696345..55698141,2	MCF-7	breast:
23	chr15:55687261..55690621-chr15:55699123..55703142,5	K562	blood:
24	chr1:179943932..179944436-chr15:55649661..55650212,2	MCF-7	breast:
25	chr15:55533451..55535034-chr15:55546175..55548758,2	K562	blood:
26	chr15:55577997..55580916-chr15:55603109..55605324,2	MCF-7	breast:
27	chr15:55607488..55610247-chr15:55633602..55635929,2	K562	blood:
28	chr15:55608305..55611231-chr15:55633798..55636486,2	MCF-7	breast:
29	chr15:55697625..55700554-chr15:55706676..55709673,2	K562	blood:
30	chr15:55528399..55531795-chr15:55570084..55572608,4	K562	blood:
31	chr15:55641538..55644525-chr15:55662930..55665274,2	MCF-7	breast:
32	chr15:55641994..55643661-chr15:55645653..55648003,2	K562	blood:
33	chr15:55550859..55553459-chr15:55571024..55573794,2	K562	blood:
34	chr15:55693271..55696849-chr15:55698845..55702459,5	MCF-7	breast:
35	chr15:55608625..55613147-chr15:55698683..55702764,8	MCF-7	breast:
36	chr15:55641489..55644289-chr15:55644644..55647294,3	MCF-7	breast:
37	chr15:55696852..55699665-chr15:55712534..55714960,2	K562	blood:
38	chr15:55563892..55565494-chr15:55566396..55568632,2	K562	blood:
39	chr15:55525732..55527261-chr15:55579170..55581534,2	K562	blood:
40	chr15:55563187..55564952-chr15:55575957..55578942,3	K562	blood:
41	chr15:55618646..55620160-chr15:55625270..55627647,2	K562	blood:
42	chr15:55566058..55568743-chr15:55575298..55578143,3	K562	blood:
43	chr15:55509736..55510399-chr15:55727358..55727891,2	MCF-7	breast:
44	chr15:55687284..55689317-chr15:55695984..55697982,2	MCF-7	breast:
45	chr15:55711236..55714133-chr15:55717728..55719591,2	K562	blood:
46	chr15:55711236..55714133-chr15:55717728..55719591,2	K562	blood:
47	chr15:55644113..55647083-chr15:55650261..55652459,2	MCF-7	breast:
48	chr15:55579894..55582757-chr15:55689915..55691723,2	K562	blood:
49	chr15:55574462..55576486-chr15:55577587..55580310,2	MCF-7	breast:
50	chr15:55612965..55617278-chr15:55620080..55622469,6	K562	blood:

(count:15 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RAB27A-2	chr15:55632237-55632650	NONHSAT043992
2	lnc-CCPG1-1	chr15:55609902-55610065	ENSG00000225973.3
3	lnc-RAB27A-2	chr15:55640530-55640920	NONHSAT043994
4	lnc-RSL24D1-2	chr15:55581914-55581989	NONHSAT043985
5	lnc-CCPG1-1	chr15:55611099-55611305	ENSG00000225973.3
6	lnc-RSL24D1-2	chr15:55561992-55562482	NONHSAT043985
7	lnc-RP11-178D12.1.1-4	chr15:55611832-55612228	NONHSAT043990
8	lnc-RAB27A-2	chr15:55640530-55640664	NONHSAT043992
9	lnc-RSL24D1-2	chr15:55562363-55562482	NONHSAT043984
10	lnc-RP11-178D12.1.1-4	chr15:55611430-55611611	NONHSAT043990
11	lnc-RSL24D1-2	chr15:55581914-55582011	NONHSAT043984
12	lnc-CCPG1-1	chr15:55606218-55606358	NONHSAT043986
13	lnc-RAB27A-2	chr15:55639164-55639265	NONHSAT043994
14	lnc-CCPG1-1	chr15:55611129-55611308	NONHSAT043986
15	lnc-CCPG1-1	chr15:55582086-55582594	NONHSAT043986

miRNA name	Chromosome Location	mirBase accession
hsa-miR-628-5p	chr15:55665189-55665210	MIMAT0004809
hsa-miR-628-3p	chr15:55665152-55665172	MIMAT0003297

(count:4 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	CCPG1	hsa-miR-30a-5p	chr15:55647691-55647712
2	CCPG1	hsa-miR-30a-5p	chr15:55648622-55648616
3	CCPG1	hsa-miR-30a-5p	chr15:55648616-55648637
4	CCPG1	hsa-miR-30a-5p	chr15:55647461-55647482

Variant related genes	Relation type
C15orf65	TF binding region
CCPG1	TF binding region
DYX1C1-CCPG1	TF binding region
DYX1C1	TF binding region
ENSG00000260036	TF binding region
MIR628	TF binding region
ENSG00000225973	TF binding region
PIGB	TF binding region
RAB27A	TF binding region
C15orf65	CpG island
CCPG1	CpG island
DYX1C1-CCPG1	CpG island
DYX1C1	CpG island
ENSG00000260036	CpG island
MIR628	CpG island
ENSG00000225973	CpG island
PIGB	CpG island
RAB27A	CpG island
ENSG00000261652	chromatin interactions
ENSG00000261771	chromatin interactions
ENSG00000199568	chromatin interactions
ENSG00000069974	chromatin interactions
ENSG00000160310	chromatin interactions
ENSG00000202077	chromatin interactions
ENSG00000069943	chromatin interactions
ENSG00000270141	chromatin interactions
ENSG00000124795	chromatin interactions
ENSG00000133639	chromatin interactions
ENSG00000199347	chromatin interactions
ENSG00000200156	chromatin interactions
ENSG00000186063	chromatin interactions
ENSG00000137876	chromatin interactions
ENSG00000260916	chromatin interactions
ENSG00000133316	chromatin interactions
ENSG00000083544	chromatin interactions
ENSG00000072042	chromatin interactions
ENSG00000187147	chromatin interactions
ENSG00000225973	chromatin interactions
ENSG00000256061	chromatin interactions
ENSG00000107164	chromatin interactions
ENSG00000138279	chromatin interactions
ENSG00000181789	chromatin interactions
ENSG00000128989	chromatin interactions
ENSG00000207964	chromatin interactions
ENSG00000167565	chromatin interactions
ENSG00000198755	chromatin interactions
ENSG00000245904	chromatin interactions
ENSG00000270103	chromatin interactions
AGO1	Mature miRNA region
TGFBRAP1	Mature miRNA region
CDC14A	Mature miRNA region
LRP6	Mature miRNA region
NELFE	Mature miRNA region

Extended variants
information (count: 11279 )
Associated
traits (count: 66 )

Variant overlapped rSNPs/rCNVs (count:11279 , 50 per page) page: 1 2 3 4 5 6 7 ... 226

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs376152590	chr15:55547704-55547705	Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
2	rs147034662	chr15:55547730-55547731	Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs538581722	chr15:55547736-55547737	Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs577862093	chr15:55547748-55547749	Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs571874087	chr15:55547749-55547750	Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs73413644	chr15:55547768-55547769	Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs180848290	chr15:55547785-55547786	Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs548952518	chr15:55547786-55547787	Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs573951627	chr15:55547805-55547806	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs186140612	chr15:55547844-55547845	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs568953470	chr15:55547849-55547850	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs147674713	chr15:55547852-55547853	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs530179987	chr15:55547868-55547869	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs189378241	chr15:55547898-55547899	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs537948862	chr15:55547899-55547900	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs563897028	chr15:55547913-55547914	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs532975432	chr15:55547948-55547949	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs142416328	chr15:55547960-55547961	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs143297623	chr15:55547979-55547980	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs74015549	chr15:55548006-55548007	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
21	rs181479510	chr15:55548038-55548039	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs186872063	chr15:55548039-55548040	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs148343296	chr15:55548090-55548091	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs552113717	chr15:55548137-55548138	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs141527308	chr15:55548139-55548140	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs534416185	chr15:55548144-55548145	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs578079169	chr15:55548160-55548161	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs34040291	chr15:55548183-55548184	Weak transcription Enhancers Flanking Active TSS Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs554372612	chr15:55548244-55548245	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs369748089	chr15:55548252-55548253	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs372138792	chr15:55548280-55548281	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs567638417	chr15:55548332-55548333	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs116286795	chr15:55548334-55548335	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs191398673	chr15:55548335-55548336	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs576036375	chr15:55548430-55548431	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs544067544	chr15:55548431-55548432	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs138478615	chr15:55548496-55548497	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs577542127	chr15:55548534-55548535	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs540037787	chr15:55548538-55548539	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs548370134	chr15:55548578-55548579	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs377088593	chr15:55548631-55548632	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs369053143	chr15:55548632-55548633	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs183201993	chr15:55548712-55548713	Weak transcription Enhancers Flanking Active TSS Genic enhancers	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs542711725	chr15:55548738-55548739	Weak transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
45	rs562430960	chr15:55548766-55548767	Weak transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
46	rs186606816	chr15:55548784-55548785	Weak transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
47	rs189672056	chr15:55548796-55548797	Weak transcription Enhancers Flanking Active TSS Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
48	rs149151782	chr15:55548802-55548803	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
49	rs373851734	chr15:55548815-55548816	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a
50	rs565556453	chr15:55548874-55548875	Weak transcription Enhancers Genic enhancers	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:66)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Basal cell lymphoma	17053054	CNVD
Breast cancer	22032731	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Hirschsprung''s Disease	21712996	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Cancer	21129771	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Abnormal phenotypes	18644119	CNVD
Cancer	16751803	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Myelofibrosis	22110671	CNVD
Acute monocytic leukemia	16498392	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	17133270	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Autism	22495309	CNVD
Melanoma	20877625	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Acute lymphoblastic leukemia	21339820	CNVD
Gastric adenocarcinoma	19115996	CNVD
Congenital diaphragmatic hernia	21341218	CNVD
Holoprosencephaly	21359414	CNVD

Chromatin state (count:5218 , 50 per page) page: 1 2 3 4 5 6 7 ... 105

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:55490000-55562800	Weak transcription	Ovary	ovary
2	chr15:55514800-55560400	Weak transcription	Spleen	Spleen
3	chr15:55516000-55559600	Weak transcription	Fetal Stomach	stomach
4	chr15:55520800-55574800	Weak transcription	Stomach Smooth Muscle	stomach
5	chr15:55538600-55549000	Enhancers	Primary monocytes fromperipheralblood	blood
6	chr15:55540600-55561200	Weak transcription	Esophagus	oesophagus
7	chr15:55541200-55549000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
8	chr15:55541800-55547800	Weak transcription	Left Ventricle	heart
9	chr15:55542400-55581000	Weak transcription	Fetal Intestine Small	intestine
10	chr15:55543400-55550600	Weak transcription	Fetal Kidney	kidney
11	chr15:55543600-55548400	Weak transcription	NHEK	skin
12	chr15:55543600-55559200	Weak transcription	Hela-S3	cervix
13	chr15:55543800-55559400	Weak transcription	Thymus	Thymus
14	chr15:55544400-55548400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr15:55544400-55558800	Weak transcription	Right Ventricle	heart
16	chr15:55544800-55557800	Weak transcription	Pancreas	Pancrea
17	chr15:55545200-55549000	Enhancers	Stomach Mucosa	stomach
18	chr15:55545200-55561000	Weak transcription	Lung	lung
19	chr15:55545800-55548200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
20	chr15:55546200-55547800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
21	chr15:55546200-55559200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
22	chr15:55546200-55559800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
23	chr15:55546200-55559800	Weak transcription	Muscle Satellite Cultured Cells	--
24	chr15:55546400-55548600	Weak transcription	NH-A	brain
25	chr15:55547000-55548400	Flanking Active TSS	Primary T helper naive cells fromperipheralblood	blood
26	chr15:55547000-55548400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
27	chr15:55547000-55548400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
28	chr15:55547000-55548600	Flanking Active TSS	Primary T helper cells PMA-I stimulated	--
29	chr15:55547200-55547800	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood
30	chr15:55547200-55547800	Enhancers	Aorta	Aorta
31	chr15:55547200-55547800	Enhancers	Osteobl	bone
32	chr15:55547200-55548000	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
33	chr15:55547200-55548000	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
34	chr15:55547200-55548000	Flanking Active TSS	Duodenum Smooth Muscle	Duodenum
35	chr15:55547200-55548200	Flanking Active TSS	Primary B cells from cord blood	blood
36	chr15:55547200-55548200	Flanking Active TSS	Primary T cells from cord blood	blood
37	chr15:55547200-55548200	Flanking Active TSS	Primary hematopoietic stem cells	blood
38	chr15:55547200-55548400	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
39	chr15:55547200-55548400	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
40	chr15:55547200-55548400	Flanking Active TSS	Liver	Liver
41	chr15:55547200-55548800	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
42	chr15:55547200-55548800	Flanking Active TSS	GM12878-XiMat	blood
43	chr15:55547200-55549400	Enhancers	Breast Myoepithelial Primary Cells	Breast
44	chr15:55547200-55549600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
45	chr15:55547200-55549600	Enhancers	Small Intestine	intestine
46	chr15:55547200-55550000	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
47	chr15:55547200-55551000	Genic enhancers	K562	blood
48	chr15:55547200-55553800	Genic enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
49	chr15:55547400-55547800	Flanking Active TSS	Primary T cells fromperipheralblood	blood
50	chr15:55547400-55547800	Flanking Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood

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