Variant report

Variant	nsv1036312
Chromosome Location	chr15:30605559-30981033
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3032)
CpG islands
(count:1778)
Chromatin interactive
region (count:7)
LncRNA
region (count:47)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3032 , 50 per page) page: 1 2 3 4 5 6 7 ... 61

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:30941065-30941323	HepG2	liver:	n/a	chr15:30941184-30941200 chr15:30941198-30941214
2	ARID3A	chr15:30917819-30918297	HepG2	liver:	n/a	n/a
3	ARID3A	chr15:30917841-30918381	K562	blood:	n/a	n/a
4	ATF1	chr15:30942408-30942747	K562	blood:	n/a	n/a
5	ATF1	chr15:30917774-30918461	K562	blood:	n/a	n/a
6	ATF2	chr15:30918103-30918425	H1-hESC	embryonic stem cell:	n/a	n/a
7	ATF2	chr15:30917709-30918426	GM12878	blood:	n/a	n/a
8	ATF2	chr15:30917694-30918103	GM12878	blood:	n/a	n/a
9	ATF2	chr15:30917808-30918347	H1-hESC	embryonic stem cell:	n/a	n/a
10	ATF2	chr15:30941959-30942874	GM12878	blood:	n/a	n/a
11	ATF3	chr15:30917703-30918445	A549	lung:	n/a	n/a
12	BATF	chr15:30858799-30859444	GM12878	blood:	n/a	n/a
13	BATF	chr15:30942101-30942823	GM12878	blood:	n/a	n/a
14	BATF	chr15:30793879-30794120	GM12878	blood:	n/a	n/a
15	BATF	chr15:30763776-30764872	GM12878	blood:	n/a	n/a
16	BATF	chr15:30720885-30721174	GM12878	blood:	n/a	n/a
17	BATF	chr15:30691171-30691739	GM12878	blood:	n/a	n/a
18	BATF	chr15:30717393-30718193	GM12878	blood:	n/a	n/a
19	BATF	chr15:30881037-30881316	GM12878	blood:	n/a	n/a
20	BATF	chr15:30678631-30678956	GM12878	blood:	n/a	chr15:30678848-30678858 chr15:30678844-30678854
21	BATF	chr15:30626371-30626674	GM12878	blood:	n/a	chr15:30626595-30626606
22	BATF	chr15:30793866-30794121	GM12878	blood:	n/a	n/a
23	BATF	chr15:30939417-30939718	GM12878	blood:	n/a	n/a
24	BATF	chr15:30716939-30717383	GM12878	blood:	n/a	n/a
25	BATF	chr15:30939410-30939698	GM12878	blood:	n/a	n/a
26	BATF	chr15:30763002-30763213	GM12878	blood:	n/a	n/a
27	BATF	chr15:30871690-30872015	GM12878	blood:	n/a	chr15:30871822-30871833 chr15:30871827-30871837 chr15:30871823-30871833
28	BATF	chr15:30880957-30881265	GM12878	blood:	n/a	n/a
29	BATF	chr15:30942098-30942760	GM12878	blood:	n/a	n/a
30	BATF	chr15:30917720-30918566	GM12878	blood:	n/a	n/a
31	BATF	chr15:30763589-30764924	GM12878	blood:	n/a	n/a
32	BATF	chr15:30626382-30626790	GM12878	blood:	n/a	chr15:30626595-30626606
33	BATF	chr15:30871617-30871985	GM12878	blood:	n/a	chr15:30871822-30871833 chr15:30871827-30871837 chr15:30871823-30871833
34	BATF	chr15:30717407-30718307	GM12878	blood:	n/a	n/a
35	BATF	chr15:30765290-30765504	GM12878	blood:	n/a	n/a
36	BATF	chr15:30765283-30765578	GM12878	blood:	n/a	n/a
37	BATF	chr15:30829434-30829723	GM12878	blood:	n/a	n/a
38	BATF	chr15:30832413-30833670	GM12878	blood:	n/a	chr15:30833063-30833074
39	BATF	chr15:30678661-30679029	GM12878	blood:	n/a	chr15:30678848-30678858 chr15:30678844-30678854
40	BATF	chr15:30832414-30833216	GM12878	blood:	n/a	chr15:30833063-30833074
41	BCL11A	chr15:30678698-30678949	GM12878	blood:	n/a	chr15:30678847-30678856 chr15:30678892-30678901
42	BCL11A	chr15:30678714-30679009	GM12878	blood:	n/a	chr15:30678847-30678856 chr15:30678892-30678901
43	BCL11A	chr15:30859004-30859344	GM12878	blood:	n/a	chr15:30859230-30859243
44	BCL11A	chr15:30717394-30718057	GM12878	blood:	n/a	n/a
45	BCL11A	chr15:30832593-30833514	GM12878	blood:	n/a	n/a
46	BCL11A	chr15:30626396-30626697	GM12878	blood:	n/a	n/a
47	BCL11A	chr15:30717383-30717989	GM12878	blood:	n/a	n/a
48	BCL11A	chr15:30763771-30764696	GM12878	blood:	n/a	n/a
49	BCL11A	chr15:30626461-30626686	GM12878	blood:	n/a	n/a
50	BCL11A	chr15:30765257-30765493	GM12878	blood:	n/a	n/a

(count:1778 , 50 per page) page: 1 2 3 4 5 6 7 ... 36

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:30918339-30918389	SK-N-MC	brain:	n/a
2	chr15:30930499-30930549	HUVEC	blood vessel:	n/a
3	chr15:30816232-30816282	HMEC	breast:	n/a
4	chr15:30699977-30700027	MCF-7	breast:	n/a
5	chr15:30920627-30920677	MCF10A-Er-Src	breast:	n/a
6	chr15:30700112-30700162	BE2_C	brain:	n/a
7	chr15:30654880-30654930	IMR90	lung:	fetal
8	chr15:30700112-30700162	RPTEC	kidney:	n/a
9	chr15:30861172-30861222	HCF	heart:	n/a
10	chr15:30918339-30918389	SK-N-MC	brain:	n/a
11	chr15:30930499-30930549	HUVEC	blood vessel:	n/a
12	chr15:30816232-30816282	HMEC	breast:	n/a
13	chr15:30699977-30700027	MCF-7	breast:	n/a
14	chr15:30920627-30920677	MCF10A-Er-Src	breast:	n/a
15	chr15:30700112-30700162	BE2_C	brain:	n/a
16	chr15:30654880-30654930	IMR90	lung:	fetal
17	chr15:30700112-30700162	RPTEC	kidney:	n/a
18	chr15:30861172-30861222	HCF	heart:	n/a
19	chr15:30816232-30816282	SAEC	small airway:	n/a
20	chr15:30763487-30763537	SK-N-MC	brain:	n/a
21	chr15:30763199-30763249	HEEpiC	esophagus:	n/a
22	chr15:30896060-30896110	HRPEpiC	eye:	n/a
23	chr15:30699977-30700027	HRCEpiC	kidney:	n/a
24	chr15:30918065-30918115	HRE	kidney:	n/a
25	chr15:30666736-30666786	AG04450	lung:	fetal
26	chr15:30917958-30918008	GM12891	blood:	n/a
27	chr15:30866091-30866141	U87	brain:	n/a
28	chr15:30763484-30763534	AG04450	lung:	fetal
29	chr15:30699977-30700027	U87	brain:	n/a
30	chr15:30699977-30700027	PANC-1	pancreas:	n/a
31	chr15:30763487-30763537	PrEC	prostate:	n/a
32	chr15:30865191-30865241	PANC-1	pancreas:	n/a
33	chr15:30920627-30920677	HRE	kidney:	n/a
34	chr15:30896060-30896110	Hepatocyte	liver:	n/a
35	chr15:30918595-30918645	SK-N-SH_RA	brain:	n/a
36	chr15:30763199-30763249	BJ	skin:	n/a
37	chr15:30685198-30685248	HRE	kidney:	n/a
38	chr15:30918313-30918363	HMEC	breast:	n/a
39	chr15:30865200-30865250	RPTEC	kidney:	n/a
40	chr15:30666736-30666786	CMK	blood:	n/a
41	chr15:30930499-30930549	HRPEpiC	eye:	n/a
42	chr15:30918339-30918389	ProgFib	skin:	n/a
43	chr15:30917958-30918008	ECC-1	luminal epithelium:	n/a
44	chr15:30919020-30919070	Caco-2	colon:	n/a
45	chr15:30917918-30917968	H1-hESC	embryonic stem cell:	embryo
46	chr15:30763484-30763534	Caco-2	colon:	n/a
47	chr15:30763199-30763249	NT2-D1	testis:	n/a
48	chr15:30763484-30763534	HPAEpiC	pulmonary alveolar:	n/a
49	chr15:30918595-30918645	ProgFib	skin:	n/a
50	chr15:30918313-30918363	GM12878	blood:	n/a

(count:7 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr15:30957691..30960365-chr15:30968745..30971745,3	K562	blood:
2	chr15:30918095..30918834-chr2:231728599..231729465,2	Hela-S3	cervix:
3	chr15:30957691..30960365-chr15:30969306..30971745,2	K562	blood:
4	chr15:30917826..30919798-chr15:32905900..32908033,2	K562	blood:
5	chr15:30957691..30960365-chr15:30968745..30971745,3	K562	blood:
6	chr15:30916698..30918883-chr15:32905767..32907284,2	MCF-7	breast:
7	chr15:30957691..30960365-chr15:30969306..30971745,2	K562	blood:

(count:47 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-GOLGA8H-2	chr15:30941000-30941732	ENSG00000269974.1
2	lnc-ARHGAP11B-1	chr15:30917557-30918469	NONHSAT041376
3	lnc-RP11-382B18.2.1-2	chr15:30673906-30674079	NONHSAT041347
4	lnc-AC026150.9.1-1	chr15:30838015-30838172	ENSG00000260693.1
5	lnc-CHRNA7-2	chr15:30878081-30878127	NONHSAT041368
6	lnc-RP11-382B18.2.1-1	chr15:30917254-30917976	ENSG00000247728
7	lnc-ARHGAP11B-1	chr15:30916697-30916815	NONHSAT041376
8	lnc-RP11-382B18.2.1-1	chr15:30917254-30917976	ENSG00000247728.2
9	lnc-CHRFAM7A-2	chr15:30649969-30650976	ENSG00000270173.1
10	lnc-RP11-382B18.2.1-1	chr15:30857143-30857384	ENSG00000247728
11	lnc-CHRNA7-2	chr15:30865172-30865219	NONHSAT041366
12	lnc-ARHGAP11B-1	chr15:30939871-30939917	NONHSAT041382
13	lnc-RP11-382B18.2.1-2	chr15:30672556-30672602	NONHSAT041347
14	lnc-RP11-382B18.2.1-1	chr15:30909201-30909447	ENSG00000247728.2
15	lnc-CHRNA7-2	chr15:30888863-30888941	NONHSAT041366
16	lnc-CHRNA7-2	chr15:30892305-30892911	NONHSAT041366
17	lnc-CHRFAM7A-3	chr15:30697514-30697792	NONHSAT041354
18	lnc-CHRNA7-2	chr15:30888863-30888941	NONHSAT041368
19	lnc-CHRNA7-2	chr15:30864758-30864774	NONHSAT041366
20	lnc-AC026150.9.1-1	chr15:30836768-30836863	ENSG00000260693.1
21	lnc-CHRNA7-2	chr15:30892305-30892850	NONHSAT140224
22	lnc-RP11-382B18.2.1-2	chr15:30679087-30679190	NONHSAT041347
23	lnc-CHRNA7-2	chr15:30871491-30871615	NONHSAT041367
24	lnc-CHRNA7-2	chr15:30865172-30865219	NONHSAT140224
25	lnc-CHRNA7-3	chr15:30852855-30853133	NONHSAT041364
26	lnc-ARHGAP11B-2	chr15:30904916-30905194	NONHSAT041372
27	lnc-AC026150.9.1-4	chr15:30749372-30751192	ucscGeneNc_uc001zhb_2
28	lnc-CHRNA7-2	chr15:30865088-30865219	NONHSAT041367
29	lnc-CHRNA7-2	chr15:30871491-30871615	NONHSAT140224
30	lnc-CHRNA7-2	chr15:30865172-30865219	NONHSAT041368
31	lnc-CHRNA7-2	chr15:30888863-30888941	NONHSAT140224
32	lnc-CHRNA7-2	chr15:30892305-30892900	NONHSAT041368
33	lnc-ARHGAP11B-1	chr15:30950920-30951047	NONHSAT041384
34	lnc-GOLGA8H-1	chr15:30909161-30909952	ENSG00000269930.1
35	lnc-CHRNA7-2	chr15:30871491-30871615	NONHSAT041366
36	lnc-AC026150.9.1-3	chr15:30780166-30782516	ENSG00000270055.1
37	lnc-CHRNA7-2	chr15:30875097-30875160	NONHSAT041368
38	lnc-RP11-382B18.2.1-2	chr15:30675247-30675585	NONHSAT041348
39	lnc-AC026150.9.1-1	chr15:30832296-30832742	ENSG00000260693.1
40	lnc-ARHGAP11B-1	chr15:30938335-30938498	NONHSAT041382
41	lnc-RP11-382B18.2.1-2	chr15:30679066-30679190	NONHSAT041348
42	lnc-CHRNA7-2	chr15:30888863-30889187	NONHSAT041367
43	lnc-RP11-382B18.2.1-3	chr15:30899898-30900396	ENSG00000270016.1
44	lnc-AC026150.9.1-5	chr15:30702037-30703662	NONHSAT041356
45	lnc-CHRNA7-2	chr15:30871491-30871615	NONHSAT041368
46	lnc-RP11-382B18.2.1-2	chr15:30675522-30675585	NONHSAT041347
47	lnc-ARHGAP11B-1	chr15:30916926-30917019	NONHSAT041376

No data

Variant related genes	Relation type
ENSG00000270016	TF binding region
ENSG00000221723	TF binding region
ENSG00000221593	TF binding region
ENSG00000207430	TF binding region
RN7SL196P	TF binding region
ULK4P2	TF binding region
RN7SL628P	TF binding region
GOLGA8H	TF binding region
ARHGAP11B	TF binding region
ENSG00000269930	TF binding region
ENSG00000269974	TF binding region
ENSG00000247728	TF binding region
ENSG00000270055	TF binding region
ENSG00000206846	TF binding region
ENSG00000238519	TF binding region
ENSG00000260693	TF binding region
GOLGA8R	TF binding region
RN7SL796P	TF binding region
DNM1P50	TF binding region
ENSG00000238783	TF binding region
ENSG00000263070	TF binding region
ENSG00000260784	TF binding region
ENSG00000270173	TF binding region
ENSG00000252602	TF binding region
ENSG00000271333	TF binding region
ENSG00000215302	TF binding region
ENSG00000221358	TF binding region
GOLGA8Q	TF binding region
CHRFAM7A	TF binding region
ENSG00000270016	CpG island
ENSG00000221723	CpG island
ENSG00000221593	CpG island
ENSG00000207430	CpG island
RN7SL196P	CpG island
ULK4P2	CpG island
RN7SL628P	CpG island
GOLGA8H	CpG island
ARHGAP11B	CpG island
ENSG00000269930	CpG island
ENSG00000269974	CpG island
ENSG00000247728	CpG island
ENSG00000270055	CpG island
ENSG00000206846	CpG island
ENSG00000238519	CpG island
ENSG00000260693	CpG island
GOLGA8R	CpG island
RN7SL796P	CpG island
DNM1P50	CpG island
ENSG00000238783	CpG island
ENSG00000263070	CpG island
ENSG00000260784	CpG island
ENSG00000270173	CpG island
ENSG00000252602	CpG island
ENSG00000271333	CpG island
ENSG00000215302	CpG island
ENSG00000221358	CpG island
GOLGA8Q	CpG island
CHRFAM7A	CpG island
ENSG00000135916	chromatin interactions
ENSG00000262728	chromatin interactions
ENSG00000244952	chromatin interactions
ENSG00000198826	chromatin interactions
PRKAB2	miRNA target sites
TGFB2	miRNA target sites

Extended variants
information (count: 4655 )
Associated
traits (count: 146 )

Variant overlapped rSNPs/rCNVs (count:4655 , 50 per page) page: 1 2 3 4 5 6 7 ... 94

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs552021230	chr15:30618202-30618203	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs565892023	chr15:30618229-30618230	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs528228444	chr15:30618261-30618262	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs370318905	chr15:30618268-30618269	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs117063019	chr15:30618280-30618281	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs375714004	chr15:30618302-30618303	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs373987650	chr15:30618354-30618355	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
8	rs77597085	chr15:30618398-30618399	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
9	rs139936926	chr15:30618399-30618400	Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
10	rs567642442	chr15:30618409-30618410	Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
11	rs536695388	chr15:30618412-30618413	Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
12	rs55870459	chr15:30618422-30618423	Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
13	rs56354166	chr15:30618424-30618425	Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
14	rs184990494	chr15:30618436-30618437	Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
15	rs369551734	chr15:30618443-30618444	Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
16	rs56253419	chr15:30618461-30618462	Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
17	rs55783652	chr15:30618466-30618467	Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
18	rs62014733	chr15:30618468-30618469	Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
19	rs55797438	chr15:30618478-30618479	Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
20	rs56164856	chr15:30618484-30618485	Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
21	rs117998023	chr15:30618490-30618491	Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
22	rs55946799	chr15:30618500-30618501	Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
23	rs201047721	chr15:30618502-30618503	Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
24	rs368468630	chr15:30618504-30618505	Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
25	rs56227055	chr15:30618516-30618517	Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
26	rs556573266	chr15:30618519-30618520	Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
27	rs55858850	chr15:30618530-30618531	Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
28	rs55685701	chr15:30618533-30618534	Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
29	rs191266598	chr15:30618545-30618546	Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
30	rs143226492	chr15:30618549-30618550	Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
31	rs55990932	chr15:30618553-30618554	Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
32	rs56071190	chr15:30618555-30618556	Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
33	rs56201759	chr15:30618557-30618558	Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
34	rs56230833	chr15:30618567-30618568	Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
35	rs183131947	chr15:30618579-30618580	Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
36	rs200546621	chr15:30618581-30618582	Flanking Bivalent TSS/Enh Enhancers Active TSS ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
37	rs113873120	chr15:30618623-30618624	Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
38	rs112088208	chr15:30618645-30618646	Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
39	rs201279680	chr15:30618651-30618652	Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
40	rs372802081	chr15:30618658-30618659	Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
41	rs112203610	chr15:30618659-30618660	Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
42	rs570396747	chr15:30618664-30618665	Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
43	rs201018479	chr15:30618667-30618668	Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
44	rs372722043	chr15:30618712-30618713	Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
45	rs566151821	chr15:30649999-30650000	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
46	rs535211618	chr15:30650038-30650039	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
47	rs554292389	chr15:30650075-30650076	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
48	rs567795045	chr15:30650081-30650082	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
49	rs536685695	chr15:30650082-30650083	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a
50	rs556556633	chr15:30650133-30650134	Inactive region	lncRNA	n/a	Overlapped CNVs	n/a

Variant related diseases (count:146)

Disease	PMID	Source
Ovarian cancer	21720365	CNVD
HDAC8	0	CNVD
NIPBL	0	CNVD
RAD21	0	CNVD
SMC1A	0	CNVD
SMC3	0	CNVD
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Prader-willi syndrome	21504564	CNVD
The inv dup or idic syndrome	19019226	CNVD
Prader-willi syndrome	21233802	CNVD
Angelman syndrome	16617304	CNVD
Angelman syndrome	20970697	CNVD
Autism	22958593	CNVD
Prader-willi syndrome	16617304	CNVD
Prader-willi syndrome	18923514	CNVD
Prader-willi syndrome	20970697	CNVD
Angelman syndrome	16183798	CNVD
Angelman syndrome	18923514	CNVD
Prader-willi syndrome	22241247	CNVD
Epilepsy	20970697	CNVD
Autism	20970697	CNVD
Autism	19935738	CNVD
Autism	22930557	CNVD
Autism	19966786	CNVD
Autism	18923514	CNVD
Autism	18925931	CNVD
Autism	18835857	CNVD
Prader-willi syndrome	18835857	CNVD
Prader-willi syndrome	22152151	CNVD
Autism	22241247	CNVD
15q-syndrome	21725066	CNVD
Prader-willi syndrome	21503198	CNVD
Autism	21956041	CNVD
Prader-willi syndrome	16760730	CNVD
Prader-willi syndrome	22470819	CNVD
prenatal diagnosis	20453657	CNVD
Prader-willi syndrome	17867985	CNVD
Angelman syndrome	21072004	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Prader-willi syndrome	18781185	CNVD
Melanoma	18172304	CNVD
Autism	17322880	CNVD
Prader-willi syndrome	19329560	CNVD
Autism	17999366	CNVD
Autism	17901113	CNVD
Neurodevelopmental disorder	17015230	CNVD
Autism	18414403	CNVD
Neurocytoma	17123091	CNVD
Mental retardation	18923513	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Intellectual disability	22102821	CNVD
Hodgkin''s lymphoma	17606441	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Breast cancer	21509527	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	17133270	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Breast cancer	21858162	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21785460	CNVD
Prostate cancer	18632612	CNVD
Angelman syndrome	18787571	CNVD
Non-syndromic sensorineural hearing loss	15273396	CNVD
Abnormal corpus callosum	21572526	CNVD
Neuropsychiatric disorder	20506139	CNVD
Austim spectrum disorder	21302340	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Autism	19204725	CNVD
Schizophrenia	19204725	CNVD
Schizophrenia	19149910	CNVD
idiopathic generalized epilepsy	19843651	CNVD
Schizophrenia	20967226	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
Epilepsy	22499536	CNVD
Schizophrenia	22499536	CNVD
Schizophrenia	18923514	CNVD
Bipolar disorder	19114987	CNVD
Schizophrenia	20587603	CNVD
Schizophrenia	22958593	CNVD
Schizophrenia	21285140	CNVD
Schizophrenia	20553308	CNVD
Schizophrenia	21956041	CNVD
Schizophrenia	20970697	CNVD
Mental retardation	19951919	CNVD
Mental retardation	21956041	CNVD
Myelofibrosis	22110671	CNVD
Mental retardation	21062444	CNVD
Autism	21269290	CNVD
Intellectual disability	21269290	CNVD
Schizophrenia	21269290	CNVD
Colorectal cancer	21128281	CNVD
Epilepsy	19289393	CNVD
Epilepsy	20643615	CNVD
Mental retardation	19289393	CNVD
Mental retardation	20152051	CNVD
Schizophrenia	19289393	CNVD
dysmorphic features	19289393	CNVD
idiopathic epilepsies	19341504	CNVD
idiopathic generalized epilepsy	19592580	CNVD
idiopathic generalized epilepsy	19136953	CNVD
Autism	22094647	CNVD
Developmental delay	19898479	CNVD
Mental retardation	18278044	CNVD
Mental retardation	19898479	CNVD
Prader-willi syndrome	18854863	CNVD
Schizophrenia	19855392	CNVD
Ovarian cancer	22174824	CNVD
Non-syndromic sensorineural hearing loss	17122850	CNVD
small cell lung cancer	20016488	CNVD
Epilepsy	20502679	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Intellectual disability	21811512	CNVD
Glioma	20126413	CNVD

Chromatin state (count:1262 , 50 per page) page: 1 2 3 4 5 6 7 ... 26

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:30618200-30618400	Bivalent/Poised TSS	H1 Cell Line	embryonic stem cell
2	chr15:30618200-30618400	Active TSS	H9 Cell Line	embryonic stem cell
3	chr15:30618200-30618400	Bivalent/Poised TSS	HUES6 Cell Line	embryonic stem cell
4	chr15:30618200-30618400	Active TSS	iPS-15b Cell Line	embryonic stem cell
5	chr15:30618200-30618400	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr15:30618200-30618600	Active TSS	iPS-20b Cell Line	embryonic stem cell
7	chr15:30618200-30618800	Active TSS	HUES48 Cell Line	embryonic stem cell
8	chr15:30618200-30618800	Active TSS	HUES64 Cell Line	embryonic stem cell
9	chr15:30618200-30618800	Active TSS	iPS-18 Cell Line	embryonic stem cell
10	chr15:30618200-30618800	Flanking Bivalent TSS/Enh	ES-UCSF4 Cell Line	embryonic stem cell
11	chr15:30618200-30618800	ZNF genes & repeats	Breast Myoepithelial Primary Cells	Breast
12	chr15:30618400-30618600	Flanking Bivalent TSS/Enh	H1 Cell Line	embryonic stem cell
13	chr15:30618400-30618600	Flanking Bivalent TSS/Enh	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
14	chr15:30618400-30618600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
15	chr15:30618400-30618600	Flanking Bivalent TSS/Enh	H9 Cell Line	embryonic stem cell
16	chr15:30618400-30618600	Flanking Bivalent TSS/Enh	HUES6 Cell Line	embryonic stem cell
17	chr15:30618400-30618600	Flanking Bivalent TSS/Enh	iPS-15b Cell Line	embryonic stem cell
18	chr15:30618400-30618600	Flanking Bivalent TSS/Enh	iPS DF 19.11 Cell Line	embryonic stem cell
19	chr15:30618400-30618600	Flanking Bivalent TSS/Enh	A549	lung
20	chr15:30618400-30618800	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
21	chr15:30618600-30618800	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
22	chr15:30618600-30618800	Active TSS	H9 Cell Line	embryonic stem cell
23	chr15:30618600-30618800	Active TSS	HUES6 Cell Line	embryonic stem cell
24	chr15:30618600-30618800	Active TSS	iPS-15b Cell Line	embryonic stem cell
25	chr15:30618600-30618800	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
26	chr15:30653800-30661000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
27	chr15:30654000-30664400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
28	chr15:30654200-30668200	Weak transcription	Aorta	Aorta
29	chr15:30655000-30659600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
30	chr15:30658800-30659000	Enhancers	Brain Angular Gyrus	brain
31	chr15:30659600-30659800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
32	chr15:30667000-30669400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
33	chr15:30668000-30668200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
34	chr15:30668000-30668200	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
35	chr15:30668200-30668400	Flanking Bivalent TSS/Enh	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
36	chr15:30668200-30668400	Flanking Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
37	chr15:30668200-30668400	ZNF genes & repeats	H9 Cell Line	embryonic stem cell
38	chr15:30668200-30668400	Enhancers	Aorta	Aorta
39	chr15:30668200-30668400	ZNF genes & repeats	Fetal Kidney	kidney
40	chr15:30668200-30668400	Active TSS	Fetal Lung	lung
41	chr15:30668200-30668400	Enhancers	Gastric	stomach
42	chr15:30668200-30668400	ZNF genes & repeats	Pancreas	Pancrea
43	chr15:30668200-30668400	Enhancers	Spleen	Spleen
44	chr15:30685000-30685400	Active TSS	H1 Cell Line	embryonic stem cell
45	chr15:30685000-30685400	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
46	chr15:30685000-30685400	Active TSS	HUES6 Cell Line	embryonic stem cell
47	chr15:30685000-30685400	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
48	chr15:30685000-30685400	Active TSS	Primary neutrophils fromperipheralblood	blood
49	chr15:30685000-30685400	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
50	chr15:30685000-30685400	Active TSS	Pancreas	Pancrea

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