Variant report

Variant	nsv1036667
Chromosome Location	chr10:5076258-5133621
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:872)
CpG islands
(count:61)
Chromatin interactive
region (count:31)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:872 , 50 per page) page: 1 2 3 4 5 6 7 ... 18

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr10:5089966-5091092	HepG2	liver:	n/a	chr10:5090324-5090340
2	ARID3A	chr10:5113567-5114862	K562	blood:	n/a	n/a
3	ARID3A	chr10:5123254-5123638	HepG2	liver:	n/a	n/a
4	ARID3A	chr10:5120586-5121209	K562	blood:	n/a	n/a
5	ARID3A	chr10:5122054-5122324	HepG2	liver:	n/a	n/a
6	ARID3A	chr10:5081022-5081232	HepG2	liver:	n/a	n/a
7	ARID3A	chr10:5112815-5114610	HepG2	liver:	n/a	n/a
8	ARID3A	chr10:5077017-5077109	K562	blood:	n/a	n/a
9	ARID3A	chr10:5083803-5084201	HepG2	liver:	n/a	n/a
10	ARID3A	chr10:5110678-5110878	K562	blood:	n/a	n/a
11	ATF1	chr10:5113912-5114323	K562	blood:	n/a	n/a
12	ATF3	chr10:5121895-5122433	A549	lung:	n/a	n/a
13	ATF3	chr10:5112971-5114564	A549	lung:	n/a	n/a
14	ATF3	chr10:5113911-5114354	K562	blood:	n/a	n/a
15	ATF3	chr10:5113430-5114380	A549	lung:	n/a	n/a
16	BACH1	chr10:5121040-5121383	K562	blood:	n/a	n/a
17	BACH1	chr10:5113506-5114634	K562	blood:	n/a	n/a
18	BACH1	chr10:5121194-5121208	H1-hESC	embryonic stem cell:	n/a	n/a
19	BACH1	chr10:5113866-5114859	H1-hESC	embryonic stem cell:	n/a	n/a
20	BCL3	chr10:5112642-5114508	A549	lung:	n/a	n/a
21	BCL3	chr10:5121933-5122486	A549	lung:	n/a	n/a
22	BCL3	chr10:5121775-5122553	A549	lung:	n/a	n/a
23	BCL3	chr10:5112966-5115139	A549	lung:	n/a	n/a
24	BHLHE40	chr10:5113561-5114284	K562	blood:	n/a	n/a
25	BHLHE40	chr10:5120759-5121300	K562	blood:	n/a	n/a
26	BHLHE40	chr10:5113493-5114242	HepG2	liver:	n/a	n/a
27	BRCA1	chr10:5113573-5114550	Hela-S3	cervix:	n/a	n/a
28	CBX3	chr10:5076830-5077189	HCT-116	colon:	n/a	n/a
29	CBX3	chr10:5076787-5077211	K562	blood:	n/a	n/a
30	CBX3	chr10:5076841-5077162	K562	blood:	n/a	n/a
31	CBX3	chr10:5113373-5114376	K562	blood:	n/a	n/a
32	CBX3	chr10:5112797-5113314	K562	blood:	n/a	n/a
33	CBX3	chr10:5120800-5121401	K562	blood:	n/a	n/a
34	CBX3	chr10:5111352-5111692	K562	blood:	n/a	n/a
35	CCNT2	chr10:5113598-5114309	K562	blood:	n/a	n/a
36	CEBPB	chr10:5132741-5133536	A549	lung:	n/a	chr10:5132922-5132933
37	CEBPB	chr10:5085737-5086568	ECC-1	luminal epithelium:	n/a	chr10:5086022-5086033
38	CEBPB	chr10:5113042-5114492	A549	lung:	n/a	chr10:5113205-5113213
39	CEBPB	chr10:5089952-5090247	A549	lung:	n/a	n/a
40	CEBPB	chr10:5113162-5114290	Hela-S3	cervix:	n/a	chr10:5113205-5113213
41	CEBPB	chr10:5113209-5114149	HepG2	liver:	n/a	n/a
42	CEBPB	chr10:5130948-5131129	HepG2	liver:	n/a	chr10:5131065-5131076
43	CEBPB	chr10:5132790-5133415	A549	lung:	n/a	chr10:5132922-5132933
44	CEBPB	chr10:5122061-5122612	A549	lung:	n/a	chr10:5122483-5122494 chr10:5122481-5122494
45	CEBPB	chr10:5121854-5122635	A549	lung:	n/a	chr10:5122483-5122494 chr10:5122481-5122494
46	CEBPB	chr10:5089961-5090237	Hela-S3	cervix:	n/a	n/a
47	CEBPB	chr10:5121904-5122523	A549	lung:	n/a	chr10:5122483-5122494 chr10:5122481-5122494
48	CEBPB	chr10:5085998-5086132	HepG2	liver:	n/a	chr10:5086022-5086033
49	CEBPB	chr10:5131998-5132475	A549	lung:	n/a	n/a
50	CEBPB	chr10:5112885-5114630	A549	lung:	n/a	chr10:5113205-5113213

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr10:5113871-5113921	RPTEC	kidney:	n/a
2	chr10:5113871-5113921	CMK	blood:	n/a
3	chr10:5113871-5113921	NB4	blood:	n/a
4	chr10:5113871-5113921	NHBE	bronchial:	n/a
5	chr10:5113871-5113921	PANC-1	pancreas:	n/a
6	chr10:5113871-5113921	U87	brain:	n/a
7	chr10:5113871-5113921	AG04449	skin:	fetal
8	chr10:5113871-5113921	GM19239	blood:	n/a
9	chr10:5113871-5113921	Jurkat	blood:	n/a
10	chr10:5113871-5113921	SK-N-SH	brain:	n/a
11	chr10:5113871-5113921	LNCaP	prostate:	n/a
12	chr10:5113871-5113921	HRCEpiC	kidney:	n/a
13	chr10:5113871-5113921	HNPCEpiC	eye:	n/a
14	chr10:5113871-5113921	HCF	heart:	n/a
15	chr10:5113871-5113921	Hepatocyte	liver:	n/a
16	chr10:5113871-5113921	GM06990	blood:	n/a
17	chr10:5113871-5113921	Hela-S3	cervix:	n/a
18	chr10:5113871-5113921	HRE	kidney:	n/a
19	chr10:5113871-5113921	HCPEpiC	choroid plexus:	n/a
20	chr10:5113871-5113921	HAEpiC	amniotic membrane:	n/a
21	chr10:5113871-5113921	ovcar-3	ovarian:	n/a
22	chr10:5113871-5113921	AG09309	skin:	n/a
23	chr10:5113871-5113921	SAEC	small airway:	n/a
24	chr10:5113871-5113921	MCF10A-Er-Src	breast:	n/a
25	chr10:5113871-5113921	SKMC	muscle:	n/a
26	chr10:5113871-5113921	HRPEpiC	eye:	n/a
27	chr10:5113871-5113921	HepG2	liver:	n/a
28	chr10:5113871-5113921	NT2-D1	testis:	n/a
29	chr10:5113871-5113921	PrEC	prostate:	n/a
30	chr10:5113871-5113921	BJ	skin:	n/a
31	chr10:5113871-5113921	HCM	heart:	n/a
32	chr10:5113871-5113921	GM12891	blood:	n/a
33	chr10:5113871-5113921	AG10803	skin:	n/a
34	chr10:5113871-5113921	GM12892	blood:	n/a
35	chr10:5113871-5113921	GM12878	blood:	n/a
36	chr10:5113871-5113921	HMEC	breast:	n/a
37	chr10:5113871-5113921	HIPEpiC	eye:	n/a
38	chr10:5113871-5113921	NHDF-neo	bronchial:	n/a
39	chr10:5113871-5113921	HL-60	blood:	n/a
40	chr10:5113871-5113921	HEK293	kidney:	embryo
41	chr10:5113871-5113921	T-47D	breast:	n/a
42	chr10:5113871-5113921	AG09319	gingival:	n/a
43	chr10:5113871-5113921	AG04450	lung:	fetal
44	chr10:5113871-5113921	K562	blood:	n/a
45	chr10:5113871-5113921	ECC-1	luminal epithelium:	n/a
46	chr10:5113871-5113921	BE2_C	brain:	n/a
47	chr10:5113871-5113921	SK-N-MC	brain:	n/a
48	chr10:5113871-5113921	HEEpiC	esophagus:	n/a
49	chr10:5113871-5113921	AoSMC	blood vessel:	n/a
50	chr10:5113871-5113921	Caco-2	colon:	n/a

(count:31 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr10:5086402..5088845-chr10:5091899..5093648,2	K562	blood:
2	chr10:5118736..5120512-chr10:5120642..5122422,2	MCF-7	breast:
3	chr10:5114807..5118123-chr10:5118660..5122292,3	MCF-7	breast:
4	chr10:5082218..5083019-chr10:5136925..5137462,2	MCF-7	breast:
5	chr10:5111978..5114211-chr10:5116578..5119006,2	MCF-7	breast:
6	chr10:5086986..5088845-chr10:5092148..5094003,2	K562	blood:
7	chr10:5113654..5115809-chr10:5119275..5121684,2	MCF-7	breast:
8	chr10:5012978..5016166-chr10:5111425..5114136,3	K562	blood:
9	chr10:5110976..5115702-chr10:5115793..5122715,9	K562	blood:
10	chr10:5023921..5025963-chr10:5094008..5095926,2	MCF-7	breast:
11	chr10:5131798..5132693-chr10:5325154..5326138,5	MCF-7	breast:
12	chr10:5073664..5075237-chr10:5075576..5077420,2	MCF-7	breast:
13	chr10:5111978..5114211-chr10:5116578..5119006,2	MCF-7	breast:
14	chr10:5115990..5119268-chr10:5120160..5123753,3	K562	blood:
15	chr10:5119351..5122041-chr10:5135538..5138283,2	MCF-7	breast:
16	chr10:5078550..5080875-chr10:5082513..5084099,2	K562	blood:
17	chr10:5124077..5126424-chr10:5132088..5134931,2	K562	blood:
18	chr10:5115990..5119268-chr10:5120160..5123753,3	K562	blood:
19	chr10:5112364..5115030-chr10:5137295..5139055,2	K562	blood:
20	chr10:5078550..5080875-chr10:5082513..5084099,2	K562	blood:
21	chr10:5056836..5057474-chr10:5082161..5082671,2	MCF-7	breast:
22	chr10:5132364..5134075-chr10:5134147..5137113,2	MCF-7	breast:
23	chr10:5118918..5120947-chr10:5130785..5133580,2	MCF-7	breast:
24	chr10:5112556..5115410-chr10:5118342..5122673,4	K562	blood:
25	chr10:5077326..5079910-chr10:5080689..5083376,2	K562	blood:
26	chr10:5086402..5088845-chr10:5091899..5093648,2	K562	blood:
27	chr10:5124077..5126424-chr10:5132088..5134931,2	K562	blood:
28	chr10:5067000..5068647-chr10:5074072..5076812,2	MCF-7	breast:
29	chr10:5082340..5083456-chr10:5325202..5326034,4	MCF-7	breast:
30	chr10:5086986..5088845-chr10:5092148..5094003,2	K562	blood:
31	chr10:4973639..4975791-chr10:5115008..5116577,2	K562	blood:

No data

Variant related genes	Relation type
AKR1C3	TF binding region
ENSG00000237831	TF binding region
ENSG00000251740	TF binding region
AKR1C3	CpG island
ENSG00000237831	CpG island
ENSG00000251740	CpG island
ENSG00000196139	chromatin interactions
ENSG00000239142	chromatin interactions
ENSG00000151632	chromatin interactions

Extended variants
information (count: 2747 )
Associated
traits (count: 55 )

Variant overlapped rSNPs/rCNVs (count:2747 , 50 per page) page: 1 2 3 4 5 6 7 ... 55

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs543900890	chr10:5076280-5076281	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs558741836	chr10:5076313-5076314	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs371153189	chr10:5076354-5076355	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs12416161	chr10:5076367-5076368	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
5	rs544258876	chr10:5076368-5076369	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs59774735	chr10:5076400-5076401	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
7	rs578181680	chr10:5076443-5076444	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
8	rs75785373	chr10:5076445-5076446	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
9	rs72772114	chr10:5076450-5076451	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
10	rs527904702	chr10:5076454-5076455	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
11	rs145881523	chr10:5076496-5076497	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
12	rs371288133	chr10:5076511-5076512	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
13	rs61301840	chr10:5076533-5076534	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
14	rs72772115	chr10:5076585-5076586	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs186734769	chr10:5076629-5076630	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
16	rs532005368	chr10:5076654-5076655	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
17	rs138487032	chr10:5076685-5076686	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
18	rs529028074	chr10:5076775-5076776	Weak transcription Flanking Active TSS Enhancers ZNF genes & repeats	TF binding region	1 gene(s)	Overlapped CNVs	n/a
19	rs7081787	chr10:5076866-5076867	Enhancers ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs190359108	chr10:5076878-5076879	Enhancers ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
21	rs548141464	chr10:5076915-5076916	Enhancers ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
22	rs68192167	chr10:5076937-5076938	Enhancers ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs7081949	chr10:5076992-5076993	Enhancers ZNF genes & repeats Weak transcription	TF binding region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
24	rs183099884	chr10:5077001-5077002	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
25	rs199991051	chr10:5077069-5077070	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
26	rs201109785	chr10:5077070-5077071	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
27	rs200777914	chr10:5077071-5077072	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
28	rs12248104	chr10:5077072-5077073	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
29	rs528408074	chr10:5077073-5077074	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
30	rs11458751	chr10:5077083-5077084	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
31	rs147266422	chr10:5077084-5077085	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
32	rs535057865	chr10:5077121-5077122	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
33	rs551720420	chr10:5077126-5077127	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
34	rs55933224	chr10:5077188-5077189	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
35	rs574838633	chr10:5077196-5077197	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
36	rs12570555	chr10:5077244-5077245	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
37	rs542546165	chr10:5077283-5077284	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
38	rs548700630	chr10:5077320-5077321	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
39	rs533959996	chr10:5077380-5077381	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
40	rs373363021	chr10:5077391-5077392	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
41	rs575814728	chr10:5077394-5077395	Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
42	rs188132647	chr10:5077409-5077410	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
43	rs565027974	chr10:5077467-5077468	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
44	rs532071004	chr10:5077481-5077482	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs201580533	chr10:5077483-5077484	Enhancers Weak transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs35198121	chr10:5077493-5077494	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
47	rs547040078	chr10:5077518-5077519	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
48	rs558930091	chr10:5077524-5077525	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
49	rs529603757	chr10:5077530-5077531	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a
50	rs548481221	chr10:5077540-5077541	Enhancers Weak transcription	TF binding region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:55)

Disease	PMID	Source
Sudden cardiac death	19188705	CNVD
Digeorge syndrome	22283845	CNVD
Cancer	21129771	CNVD
Colorectal cancer	20709793	CNVD
Wilms tumour	19047088	CNVD
Hepatocellular carcinoma	16750200	CNVD
Acute myeloid leukemia	16864856	CNVD
Cancer	21183584	CNVD
Barakat syndrome	22470819	CNVD
Melanoma	18172304	CNVD
Ovarian cancer	21720365	CNVD
Autism	18414403	CNVD
Malignant melanoma	18718029	CNVD
Breast cancer	22032731	CNVD
Medulloblastoma	16783165	CNVD
Breast cancer	17133270	CNVD
Endometrioid adenocarcinoma	16974079	CNVD
Breast cancer	17603634	CNVD
Endometrial cancer	22040021	CNVD
Glioblastoma multiforme	21080181	CNVD
Breast cancer	21264507	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Phyllodes tumor	17334353	CNVD
Acute lymphoblastic leukemia	17690704	CNVD
Pancreatic endocrine tumor	17639061	CNVD
Gastric cancer	17908304	CNVD
Chordoma	21602918	CNVD
Ewing''s sarcoma	21437220	CNVD
Medulloblastoma	21979893	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
small cell lung cancer	20016488	CNVD
Lung cancer	18438408	CNVD
Thoracic aortic aneurysm	21092924	CNVD
Melanoma	17363583	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Ewing''s sarcoma	17952124	CNVD
Oral cancer	21386901	CNVD
Breast cancer	21785460	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Prostate cancer	18632612	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Breast cancer	21858162	CNVD
Breast cancer	21364760	CNVD
Acute lymphoblastic leukemia	20724749	CNVD
Autism	22495311	CNVD
Renal cell carcinoma	18765545	CNVD
lymphocytic leukemia	21291569	CNVD
Urothelial cell carcinoma	18451213	CNVD
Myelofibrosis	22110671	CNVD
Glioblastoma multiforme	22286061	CNVD
Myxofibrosarcoma	16751306	CNVD
Non-muscle invasive bladder neoplasm	19445696	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:519 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:5068000-5076800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr10:5074000-5078800	Weak transcription	Stomach Mucosa	stomach
3	chr10:5074800-5076600	Enhancers	Hela-S3	cervix
4	chr10:5075000-5076400	Enhancers	HMEC	breast
5	chr10:5075000-5076800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr10:5075000-5076800	Enhancers	Muscle Satellite Cultured Cells	--
7	chr10:5075200-5076600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
8	chr10:5075200-5076600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
9	chr10:5075200-5076600	Enhancers	NH-A	brain
10	chr10:5075200-5077000	ZNF genes & repeats	Adipose Nuclei	Adipose
11	chr10:5075600-5076800	Enhancers	Osteobl	bone
12	chr10:5076000-5076800	Flanking Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr10:5076200-5077400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
14	chr10:5076200-5080800	Weak transcription	NHDF-Ad	bronchial
15	chr10:5076400-5076600	ZNF genes & repeats	A549	lung
16	chr10:5076600-5077000	ZNF genes & repeats	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr10:5076800-5077000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr10:5077000-5078000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr10:5077400-5077600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
20	chr10:5077400-5077800	Enhancers	iPS-18 Cell Line	embryonic stem cell
21	chr10:5077600-5078600	Enhancers	HUES48 Cell Line	embryonic stem cell
22	chr10:5077600-5078600	Enhancers	iPS-20b Cell Line	embryonic stem cell
23	chr10:5077600-5083000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
24	chr10:5077800-5078200	Enhancers	HUES64 Cell Line	embryonic stem cell
25	chr10:5078400-5078600	Enhancers	Rectal Mucosa Donor 29	rectum
26	chr10:5078400-5078800	Enhancers	Fetal Intestine Large	intestine
27	chr10:5078400-5079200	Weak transcription	Sigmoid Colon	Sigmoid Colon
28	chr10:5078600-5079200	Enhancers	Duodenum Mucosa	Duodenum
29	chr10:5078600-5080200	Weak transcription	Rectal Mucosa Donor 29	rectum
30	chr10:5078600-5081000	Enhancers	Rectal Mucosa Donor 31	rectum
31	chr10:5078800-5081400	Enhancers	Stomach Mucosa	stomach
32	chr10:5079200-5079400	Enhancers	Sigmoid Colon	Sigmoid Colon
33	chr10:5079200-5080400	Weak transcription	Duodenum Mucosa	Duodenum
34	chr10:5079400-5084600	Weak transcription	Sigmoid Colon	Sigmoid Colon
35	chr10:5080000-5080200	Enhancers	Small Intestine	intestine
36	chr10:5080200-5080600	Enhancers	Rectal Mucosa Donor 29	rectum
37	chr10:5080200-5083200	Weak transcription	Small Intestine	intestine
38	chr10:5080400-5080800	Enhancers	Duodenum Mucosa	Duodenum
39	chr10:5080600-5083000	Weak transcription	Rectal Mucosa Donor 29	rectum
40	chr10:5080800-5081400	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
41	chr10:5080800-5081600	Enhancers	NHDF-Ad	bronchial
42	chr10:5080800-5083600	Weak transcription	Duodenum Mucosa	Duodenum
43	chr10:5081000-5081600	Enhancers	HepG2	liver
44	chr10:5081000-5083600	Weak transcription	Rectal Mucosa Donor 31	rectum
45	chr10:5081200-5081400	Enhancers	Adipose Nuclei	Adipose
46	chr10:5081200-5081400	Enhancers	Liver	Liver
47	chr10:5081400-5082600	Weak transcription	Adipose Nuclei	Adipose
48	chr10:5081400-5082800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
49	chr10:5081400-5083400	Weak transcription	Stomach Mucosa	stomach
50	chr10:5081600-5082800	Weak transcription	Liver	Liver

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links