Variant report

Variant	nsv1036924
Chromosome Location	chr15:55527874-55616480
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2508)
CpG islands
(count:2261)
Chromatin interactive
region (count:163)
LncRNA
region (count:12)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2508 , 50 per page) page: 1 2 3 4 5 6 7 ... 51

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:55530654-55532559	K562	blood:	n/a	n/a
2	ARID3A	chr15:55571287-55572489	K562	blood:	n/a	n/a
3	ARID3A	chr15:55527826-55528022	K562	blood:	n/a	n/a
4	ARID3A	chr15:55547675-55547685	K562	blood:	n/a	n/a
5	ARID3A	chr15:55611213-55612063	K562	blood:	n/a	n/a
6	ARID3A	chr15:55611067-55611566	HepG2	liver:	n/a	n/a
7	ARID3A	chr15:55552870-55553285	HepG2	liver:	n/a	n/a
8	ARID3A	chr15:55550744-55550788	K562	blood:	n/a	n/a
9	ARID3A	chr15:55576575-55577009	K562	blood:	n/a	n/a
10	ARID3A	chr15:55574357-55574917	K562	blood:	n/a	n/a
11	ARID3A	chr15:55582501-55582999	K562	blood:	n/a	n/a
12	ARID3A	chr15:55578355-55578439	K562	blood:	n/a	n/a
13	ARID3A	chr15:55582683-55582974	HepG2	liver:	n/a	n/a
14	ARID3A	chr15:55542686-55542931	K562	blood:	n/a	n/a
15	ARID3A	chr15:55611806-55612064	HepG2	liver:	n/a	n/a
16	ARID3A	chr15:55571700-55572175	HepG2	liver:	n/a	n/a
17	ARID3A	chr15:55529100-55530323	K562	blood:	n/a	n/a
18	ARID3A	chr15:55559634-55560031	K562	blood:	n/a	n/a
19	ARID3A	chr15:55542492-55543043	HepG2	liver:	n/a	n/a
20	ATF1	chr15:55547268-55547416	K562	blood:	n/a	n/a
21	ATF1	chr15:55527854-55528080	K562	blood:	n/a	n/a
22	ATF1	chr15:55611017-55611627	K562	blood:	n/a	n/a
23	ATF1	chr15:55531712-55532710	K562	blood:	n/a	n/a
24	ATF1	chr15:55578747-55579084	K562	blood:	n/a	n/a
25	ATF1	chr15:55529617-55530115	K562	blood:	n/a	n/a
26	ATF1	chr15:55612137-55612498	K562	blood:	n/a	n/a
27	ATF1	chr15:55571782-55572252	K562	blood:	n/a	n/a
28	ATF1	chr15:55574440-55574824	K562	blood:	n/a	n/a
29	ATF2	chr15:55582700-55583050	H1-hESC	embryonic stem cell:	n/a	n/a
30	ATF2	chr15:55547721-55548440	GM12878	blood:	n/a	n/a
31	ATF2	chr15:55571687-55572736	GM12878	blood:	n/a	n/a
32	ATF2	chr15:55569066-55569831	GM12878	blood:	n/a	n/a
33	ATF2	chr15:55582132-55582686	GM12878	blood:	n/a	n/a
34	ATF2	chr15:55610860-55611517	GM12878	blood:	n/a	n/a
35	ATF2	chr15:55611262-55611615	H1-hESC	embryonic stem cell:	n/a	n/a
36	ATF2	chr15:55571619-55572737	GM12878	blood:	n/a	n/a
37	ATF2	chr15:55581834-55583029	GM12878	blood:	n/a	n/a
38	ATF2	chr15:55568824-55569817	GM12878	blood:	n/a	n/a
39	ATF2	chr15:55610849-55611625	GM12878	blood:	n/a	n/a
40	ATF3	chr15:55582555-55583026	A549	lung:	n/a	n/a
41	ATF3	chr15:55559648-55559988	K562	blood:	n/a	n/a
42	ATF3	chr15:55574419-55574817	K562	blood:	n/a	n/a
43	ATF3	chr15:55571773-55572313	K562	blood:	n/a	n/a
44	ATF3	chr15:55611075-55611605	A549	lung:	n/a	n/a
45	ATF3	chr15:55529616-55530176	K562	blood:	n/a	n/a
46	ATF3	chr15:55571938-55572177	K562	blood:	n/a	n/a
47	ATF3	chr15:55611094-55611636	A549	lung:	n/a	n/a
48	BACH1	chr15:55582697-55583094	H1-hESC	embryonic stem cell:	n/a	n/a
49	BACH1	chr15:55529278-55529911	K562	blood:	n/a	n/a
50	BACH1	chr15:55582872-55582986	K562	blood:	n/a	n/a

(count:2261 , 50 per page) page: 1 2 3 4 5 6 7 ... 46

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:55582808-55582858	MCF-7	breast:	n/a
2	chr15:55610624-55610674	HCPEpiC	choroid plexus:	n/a
3	chr15:55574912-55574962	A549	lung:	n/a
4	chr15:55604363-55604413	AG09309	skin:	n/a
5	chr15:55582808-55582858	MCF-7	breast:	n/a
6	chr15:55610624-55610674	HCPEpiC	choroid plexus:	n/a
7	chr15:55574912-55574962	A549	lung:	n/a
8	chr15:55604363-55604413	AG09309	skin:	n/a
9	chr15:55611321-55611371	HepG2	liver:	n/a
10	chr15:55582494-55582544	HCF	heart:	n/a
11	chr15:55582494-55582544	SK-N-SH	brain:	n/a
12	chr15:55611440-55611490	RPTEC	kidney:	n/a
13	chr15:55579397-55579447	ProgFib	skin:	n/a
14	chr15:55608323-55608373	AG10803	skin:	n/a
15	chr15:55582165-55582215	Hepatocyte	liver:	n/a
16	chr15:55569533-55569583	SK-N-SH_RA	brain:	n/a
17	chr15:55579397-55579447	NB4	blood:	n/a
18	chr15:55582570-55582620	ovcar-3	ovarian:	n/a
19	chr15:55582890-55582940	T-47D	breast:	n/a
20	chr15:55582159-55582209	HCM	heart:	n/a
21	chr15:55581420-55581470	ovcar-3	ovarian:	n/a
22	chr15:55562773-55562823	T-47D	breast:	n/a
23	chr15:55611099-55611149	AG10803	skin:	n/a
24	chr15:55562699-55562749	HEEpiC	esophagus:	n/a
25	chr15:55594433-55594483	PrEC	prostate:	n/a
26	chr15:55583094-55583144	ovcar-3	ovarian:	n/a
27	chr15:55583094-55583144	SK-N-SH_RA	brain:	n/a
28	chr15:55611321-55611371	GM06990	blood:	n/a
29	chr15:55611440-55611490	AoSMC	blood vessel:	n/a
30	chr15:55581976-55582026	HEK293	kidney:	embryo
31	chr15:55611099-55611149	NT2-D1	testis:	n/a
32	chr15:55582394-55582444	HAEpiC	amniotic membrane:	n/a
33	chr15:55582808-55582858	MCF10A-Er-Src	breast:	n/a
34	chr15:55582159-55582209	AG04449	skin:	fetal
35	chr15:55611086-55611136	GM12891	blood:	n/a
36	chr15:55582494-55582544	HAEpiC	amniotic membrane:	n/a
37	chr15:55579397-55579447	AG04449	skin:	fetal
38	chr15:55582808-55582858	AG10803	skin:	n/a
39	chr15:55611440-55611490	HRCEpiC	kidney:	n/a
40	chr15:55563294-55563344	ECC-1	luminal epithelium:	n/a
41	chr15:55581976-55582026	A549	lung:	n/a
42	chr15:55582248-55582298	BE2_C	brain:	n/a
43	chr15:55559759-55559809	Hela-S3	cervix:	n/a
44	chr15:55559759-55559809	IMR90	lung:	fetal
45	chr15:55611099-55611149	LNCaP	prostate:	n/a
46	chr15:55581420-55581470	AG04449	skin:	fetal
47	chr15:55604363-55604413	HepG2	liver:	n/a
48	chr15:55582248-55582298	GM12891	blood:	n/a
49	chr15:55611214-55611264	PFSK-1	brain:	n/a
50	chr15:55585235-55585285	T-47D	breast:	n/a

(count:163 , 50 per page) page: 1 2 3 4

No.	Distal block	Cell Line	Cell type
1	chr15:55546620..55548726-chr15:55579934..55582507,2	K562	blood:
2	chr15:55603830..55605770-chr15:55609490..55611756,2	K562	blood:
3	chr15:55580735..55582255-chr15:55582320..55584429,2	MCF-7	breast:
4	chr15:55601212..55603506-chr15:55611537..55613795,2	MCF-7	breast:
5	chr15:55520021..55524159-chr15:55571941..55574919,3	K562	blood:
6	chr15:55557840..55559411-chr15:55561178..55563204,2	K562	blood:
7	chr15:55575274..55577450-chr15:55698113..55700653,2	K562	blood:
8	chr15:55558293..55561051-chr15:55570591..55574257,3	K562	blood:
9	chr15:55525732..55527261-chr15:55579170..55581534,2	K562	blood:
10	chr15:55610603..55613441-chr15:55640435..55642887,3	K562	blood:
11	chr15:55529753..55531504-chr15:55533201..55534943,2	K562	blood:
12	chr15:55528450..55530631-chr15:55610596..55613298,2	K562	blood:
13	chr15:55509049..55510463-chr15:55582084..55583305,19	MCF-7	breast:
14	chr15:55532146..55535139-chr15:55535159..55539232,4	K562	blood:
15	chr15:55556814..55559793-chr15:55572719..55574257,2	K562	blood:
16	chr15:55532146..55535139-chr15:55535159..55539232,4	K562	blood:
17	chr15:55580259..55584808-chr15:55609765..55612829,5	K562	blood:
18	chr15:55610027..55612992-chr15:55688713..55692198,3	K562	blood:
19	chr15:55580643..55583951-chr15:55698978..55701737,3	K562	blood:
20	chr15:55609847..55611398-chr15:55646178..55648636,2	K562	blood:
21	chr15:55540071..55542542-chr15:55580150..55582152,2	K562	blood:
22	chr15:55579894..55582757-chr15:55689915..55691723,2	K562	blood:
23	chr15:55561094..55566521-chr15:55568415..55573489,7	K562	blood:
24	chr15:55538333..55540219-chr15:55542009..55544600,2	MCF-7	breast:
25	chr15:55563187..55564952-chr15:55575957..55578942,3	K562	blood:
26	chr15:55577567..55579089-chr15:55694528..55696394,2	K562	blood:
27	chr15:55462838..55463684-chr15:55582353..55582908,2	K562	blood:
28	chr15:55550859..55553459-chr15:55571024..55573794,2	K562	blood:
29	chr15:55528685..55531049-chr15:55537192..55539121,2	MCF-7	breast:
30	chr15:55526209..55528745-chr15:55538036..55540440,2	K562	blood:
31	chr15:55536038..55538985-chr15:55542222..55544123,2	K562	blood:
32	chr15:55519854..55522805-chr15:55537341..55539230,2	MCF-7	breast:
33	chr15:55557767..55561627-chr15:55569250..55572425,4	K562	blood:
34	chr15:55574462..55576486-chr15:55577587..55580310,2	MCF-7	breast:
35	chr15:55533451..55535034-chr15:55546175..55548758,2	K562	blood:
36	chr15:55531824..55533387-chr15:55558858..55561281,2	K562	blood:
37	chr15:55496447..55499435-chr15:55582041..55583888,2	K562	blood:
38	chr15:55572666..55574858-chr15:55699937..55702712,2	K562	blood:
39	chr15:55529763..55532078-chr15:55535534..55537821,2	K562	blood:
40	chr15:55558293..55561051-chr15:55570591..55574257,3	K562	blood:
41	chr15:55528122..55530871-chr15:55531948..55534527,2	MCF-7	breast:
42	chr15:55557767..55561627-chr15:55569250..55572425,4	K562	blood:
43	chr15:55556814..55559793-chr15:55572719..55574257,2	K562	blood:
44	chr15:55485173..55489207-chr15:55609824..55611374,3	K562	blood:
45	chr15:55542658..55546534-chr15:55547557..55552018,8	K562	blood:
46	chr15:55545068..55547245-chr15:55548982..55551880,2	MCF-7	breast:
47	chr15:55524035..55525892-chr15:55526403..55529147,3	K562	blood:
48	chr15:55559026..55561608-chr15:55564139..55565881,2	K562	blood:
49	chr15:55582032..55583811-chr15:55727186..55728164,12	MCF-7	breast:
50	chr15:55485508..55492313-chr15:55579801..55583590,12	K562	blood:

(count:12 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-RSL24D1-2	chr15:55530316-55530689	NONHSAT043984
2	lnc-CCPG1-1	chr15:55611099-55611305	ENSG00000225973.3
3	lnc-RP11-178D12.1.1-4	chr15:55611832-55612228	NONHSAT043990
4	lnc-CCPG1-1	chr15:55609902-55610065	ENSG00000225973.3
5	lnc-RSL24D1-2	chr15:55561992-55562482	NONHSAT043985
6	lnc-CCPG1-1	chr15:55582086-55582594	NONHSAT043986
7	lnc-RSL24D1-2	chr15:55581914-55581989	NONHSAT043985
8	lnc-RSL24D1-2	chr15:55562363-55562482	NONHSAT043984
9	lnc-CCPG1-1	chr15:55611129-55611308	NONHSAT043986
10	lnc-RSL24D1-2	chr15:55581914-55582011	NONHSAT043984
11	lnc-RP11-178D12.1.1-4	chr15:55611430-55611611	NONHSAT043990
12	lnc-CCPG1-1	chr15:55606218-55606358	NONHSAT043986

No data

Variant related genes	Relation type
ENSG00000225973	TF binding region
PIGB	TF binding region
RAB27A	TF binding region
ENSG00000225973	CpG island
PIGB	CpG island
RAB27A	CpG island
ENSG00000260916	chromatin interactions
ENSG00000124795	chromatin interactions
ENSG00000225973	chromatin interactions
ENSG00000256061	chromatin interactions
ENSG00000199347	chromatin interactions
ENSG00000167565	chromatin interactions
ENSG00000261771	chromatin interactions
ENSG00000270103	chromatin interactions
ENSG00000261652	chromatin interactions
ENSG00000187147	chromatin interactions
ENSG00000128989	chromatin interactions
ENSG00000133316	chromatin interactions
ENSG00000069974	chromatin interactions
ENSG00000137876	chromatin interactions
ENSG00000181789	chromatin interactions
ENSG00000069943	chromatin interactions
ENSG00000138279	chromatin interactions

Extended variants
information (count: 3733 )
Associated
traits (count: 63 )

Variant overlapped rSNPs/rCNVs (count:3733 , 50 per page) page: 1 2 3 4 5 6 7 ... 75

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs189237136	chr15:55527886-55527887	Weak transcription Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
2	rs144225097	chr15:55527905-55527906	Weak transcription Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
3	rs543766897	chr15:55527956-55527957	Weak transcription Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
4	rs75353281	chr15:55527971-55527972	Weak transcription Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
5	rs539340429	chr15:55527975-55527976	Weak transcription Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
6	rs573900277	chr15:55527990-55527991	Weak transcription Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
7	rs200686769	chr15:55528001-55528002	Weak transcription Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
8	rs542760686	chr15:55528006-55528007	Weak transcription Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
9	rs78108178	chr15:55528009-55528010	Weak transcription Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs557254	chr15:55528012-55528013	Weak transcription Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
11	rs373621649	chr15:55528013-55528014	Weak transcription Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs76280681	chr15:55528014-55528015	Weak transcription Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs559185542	chr15:55528019-55528020	Weak transcription Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs58080368	chr15:55528040-55528041	Weak transcription Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
15	rs577155225	chr15:55528055-55528056	Weak transcription Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs59912005	chr15:55528074-55528075	Weak transcription Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
17	rs143665490	chr15:55528099-55528100	Weak transcription Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs146816672	chr15:55528126-55528127	Weak transcription Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs573657827	chr15:55528143-55528144	Weak transcription Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs372207391	chr15:55528188-55528189	Weak transcription Enhancers Strong transcription Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs140640830	chr15:55528205-55528206	Weak transcription Strong transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs7173971	chr15:55528208-55528209	Weak transcription Strong transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
23	rs566865608	chr15:55528224-55528225	Weak transcription Strong transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs535812520	chr15:55528225-55528226	Weak transcription Strong transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs542346850	chr15:55528229-55528230	Weak transcription Strong transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs181633012	chr15:55528286-55528287	Weak transcription Strong transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs569307322	chr15:55528288-55528289	Weak transcription Strong transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs7172628	chr15:55528308-55528309	Weak transcription Strong transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
29	rs370225731	chr15:55528337-55528338	Weak transcription Strong transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs11312412	chr15:55528363-55528364	Weak transcription Strong transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs562333021	chr15:55528369-55528370	Weak transcription Strong transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs60735285	chr15:55528373-55528374	Weak transcription Strong transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs189945404	chr15:55528377-55528378	Weak transcription Strong transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs553006240	chr15:55528381-55528382	Weak transcription Strong transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs572831496	chr15:55528382-55528383	Weak transcription Strong transcription Enhancers Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs531446537	chr15:55528432-55528433	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs541945532	chr15:55528435-55528436	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs561340954	chr15:55528477-55528478	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
39	rs530469805	chr15:55528531-55528532	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
40	rs113360503	chr15:55528549-55528550	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
41	rs6493773	chr15:55528565-55528566	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	4 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs376830468	chr15:55528567-55528568	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
43	rs141090803	chr15:55528594-55528595	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
44	rs180728750	chr15:55528652-55528653	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
45	rs546898472	chr15:55528653-55528654	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
46	rs560765195	chr15:55528667-55528668	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
47	rs551213363	chr15:55528719-55528720	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
48	rs186211869	chr15:55528737-55528738	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
49	rs549493259	chr15:55528758-55528759	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
50	rs150275594	chr15:55528887-55528888	Weak transcription Strong transcription Active TSS	Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:63)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Basal cell lymphoma	17053054	CNVD
Breast cancer	22032731	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Hirschsprung''s Disease	21712996	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Cancer	21129771	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Abnormal phenotypes	18644119	CNVD
Cancer	16751803	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Myelofibrosis	22110671	CNVD
Acute monocytic leukemia	16498392	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Breast cancer	17133270	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Autism	22495309	CNVD
Melanoma	20877625	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	18496225	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Acute lymphoblastic leukemia	21339820	CNVD

Chromatin state (count:2986 , 50 per page) page: 1 2 3 4 5 6 7 ... 60

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:55489800-55540200	Weak transcription	Esophagus	oesophagus
2	chr15:55490000-55529400	Weak transcription	Rectal Smooth Muscle	rectum
3	chr15:55490000-55562800	Weak transcription	Ovary	ovary
4	chr15:55509400-55541600	Weak transcription	Small Intestine	intestine
5	chr15:55510400-55528000	Weak transcription	Brain Inferior Temporal Lobe	brain
6	chr15:55512800-55541600	Weak transcription	Colonic Mucosa	Colon
7	chr15:55513400-55532400	Weak transcription	Left Ventricle	heart
8	chr15:55514200-55532000	Weak transcription	Lung	lung
9	chr15:55514200-55532600	Weak transcription	Psoas Muscle	Psoas
10	chr15:55514200-55540400	Weak transcription	Placenta Amnion	Placenta Amnion
11	chr15:55514200-55545200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr15:55514400-55541200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
13	chr15:55514600-55534200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr15:55514600-55542600	Weak transcription	Hela-S3	cervix
15	chr15:55514600-55543200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
16	chr15:55514800-55532600	Weak transcription	Adipose Nuclei	Adipose
17	chr15:55514800-55539800	Weak transcription	Duodenum Smooth Muscle	Duodenum
18	chr15:55514800-55560400	Weak transcription	Spleen	Spleen
19	chr15:55516000-55559600	Weak transcription	Fetal Stomach	stomach
20	chr15:55516200-55529400	Strong transcription	Foreskin Melanocyte Primary Cells skin03	Skin
21	chr15:55517600-55542800	Weak transcription	Thymus	Thymus
22	chr15:55517800-55532400	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
23	chr15:55517800-55539600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr15:55517800-55542200	Weak transcription	Fetal Thymus	thymus
25	chr15:55517800-55542800	Weak transcription	Primary B cells from peripheral blood	blood
26	chr15:55518000-55539200	Weak transcription	Fetal Lung	lung
27	chr15:55518600-55533600	Strong transcription	Monocytes-CD14+_RO01746	blood
28	chr15:55518600-55539400	Weak transcription	Placenta	Placenta
29	chr15:55518800-55541200	Weak transcription	Aorta	Aorta
30	chr15:55520800-55528400	Weak transcription	Rectal Mucosa Donor 29	rectum
31	chr15:55520800-55574800	Weak transcription	Stomach Smooth Muscle	stomach
32	chr15:55521000-55541400	Weak transcription	Fetal Intestine Large	intestine
33	chr15:55522400-55532400	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
34	chr15:55522600-55529600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
35	chr15:55522800-55532400	Weak transcription	Sigmoid Colon	Sigmoid Colon
36	chr15:55522800-55532600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
37	chr15:55522800-55534200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
38	chr15:55522800-55540600	Weak transcription	Liver	Liver
39	chr15:55522800-55543200	Weak transcription	Pancreas	Pancrea
40	chr15:55522800-55547000	Weak transcription	GM12878-XiMat	blood
41	chr15:55523200-55528200	Weak transcription	Primary T killer memory cells from peripheral blood	blood
42	chr15:55523200-55542600	Weak transcription	HMEC	breast
43	chr15:55523400-55529600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
44	chr15:55523600-55533200	Weak transcription	Primary hematopoietic stem cells	blood
45	chr15:55524000-55531800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
46	chr15:55525400-55531800	Weak transcription	Gastric	stomach
47	chr15:55526600-55531600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
48	chr15:55526800-55529400	Weak transcription	Stomach Mucosa	stomach
49	chr15:55526800-55537200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
50	chr15:55526800-55543200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood

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