Variant report

Variant	nsv1037430
Chromosome Location	chr11:33183475-33341784
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:2171)
CpG islands
(count:1895)
Chromatin interactive
region (count:144)
LncRNA
region (count:14)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:2171 , 50 per page) page: 1 2 3 4 5 6 7 ... 44

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr11:33279537-33280483	HepG2	liver:	n/a	n/a
2	ARID3A	chr11:33193183-33193188	K562	blood:	n/a	n/a
3	ARID3A	chr11:33280884-33281018	HepG2	liver:	n/a	n/a
4	ARID3A	chr11:33280061-33280282	K562	blood:	n/a	n/a
5	ARID3A	chr11:33187786-33188158	HepG2	liver:	n/a	n/a
6	ARID3A	chr11:33229217-33229421	K562	blood:	n/a	n/a
7	ARID3A	chr11:33187666-33188187	K562	blood:	n/a	chr11:33188154-33188170
8	ARID3A	chr11:33204058-33204223	HepG2	liver:	n/a	n/a
9	ARID3A	chr11:33280804-33281150	K562	blood:	n/a	n/a
10	ARID3A	chr11:33201178-33201210	K562	blood:	n/a	n/a
11	ARID3A	chr11:33278760-33279150	HepG2	liver:	n/a	n/a
12	ARID3A	chr11:33288174-33288395	K562	blood:	n/a	n/a
13	ARID3A	chr11:33288039-33288460	HepG2	liver:	n/a	n/a
14	ARID3A	chr11:33233161-33233450	HepG2	liver:	n/a	n/a
15	ARID3A	chr11:33277822-33278022	HepG2	liver:	n/a	n/a
16	ARID3A	chr11:33182051-33183545	K562	blood:	n/a	n/a
17	ATF1	chr11:33190481-33190793	K562	blood:	n/a	n/a
18	ATF1	chr11:33341606-33341888	K562	blood:	n/a	n/a
19	ATF1	chr11:33182918-33183497	K562	blood:	n/a	n/a
20	ATF1	chr11:33275258-33275288	K562	blood:	n/a	n/a
21	ATF1	chr11:33329665-33330069	K562	blood:	n/a	n/a
22	ATF1	chr11:33249480-33249846	K562	blood:	n/a	n/a
23	ATF2	chr11:33279439-33280494	GM12878	blood:	n/a	n/a
24	ATF2	chr11:33182564-33183612	H1-hESC	embryonic stem cell:	n/a	chr11:33183172-33183183
25	ATF2	chr11:33279927-33280370	H1-hESC	embryonic stem cell:	n/a	n/a
26	ATF2	chr11:33182565-33183521	H1-hESC	embryonic stem cell:	n/a	chr11:33183172-33183183
27	ATF3	chr11:33249491-33249809	K562	blood:	n/a	n/a
28	ATF3	chr11:33182601-33183715	A549	lung:	n/a	chr11:33183174-33183181 chr11:33183174-33183182 chr11:33183170-33183185 chr11:33183172-33183185 chr11:33183172-33183183 chr11:33183151-33183160 chr11:33183171-33183182
29	ATF3	chr11:33279487-33279990	A549	lung:	n/a	n/a
30	ATF3	chr11:33279599-33280413	A549	lung:	n/a	n/a
31	BACH1	chr11:33279652-33280280	H1-hESC	embryonic stem cell:	n/a	n/a
32	BACH1	chr11:33279271-33279281	H1-hESC	embryonic stem cell:	n/a	n/a
33	BACH1	chr11:33182721-33183535	H1-hESC	embryonic stem cell:	n/a	n/a
34	BACH1	chr11:33189975-33189977	K562	blood:	n/a	n/a
35	BCL3	chr11:33279715-33280657	A549	lung:	n/a	chr11:33280069-33280078 chr11:33280094-33280107 chr11:33280065-33280078 chr11:33280086-33280099 chr11:33280095-33280108
36	BCL3	chr11:33262786-33263061	GM12878	blood:	n/a	n/a
37	BCL3	chr11:33279580-33280476	A549	lung:	n/a	chr11:33280069-33280078 chr11:33280094-33280107 chr11:33280065-33280078 chr11:33280086-33280099 chr11:33280095-33280108
38	BCL3	chr11:33182611-33183511	A549	lung:	n/a	chr11:33183037-33183050
39	BCL3	chr11:33278860-33279547	A549	lung:	n/a	chr11:33279283-33279296 chr11:33279375-33279384
40	BCLAF1	chr11:33182620-33183480	K562	blood:	n/a	chr11:33183037-33183050
41	BCLAF1	chr11:33279558-33280680	K562	blood:	n/a	chr11:33280069-33280078 chr11:33280094-33280107 chr11:33280065-33280078 chr11:33280086-33280099 chr11:33280095-33280108
42	BCLAF1	chr11:33278387-33279453	GM12878	blood:	n/a	chr11:33278749-33278762 chr11:33279283-33279296 chr11:33278715-33278728 chr11:33279375-33279384
43	BCLAF1	chr11:33279496-33280164	GM12878	blood:	n/a	chr11:33280069-33280078 chr11:33280094-33280107 chr11:33280065-33280078 chr11:33280086-33280099 chr11:33280095-33280108
44	BCLAF1	chr11:33279706-33280419	GM12878	blood:	n/a	chr11:33280069-33280078 chr11:33280094-33280107 chr11:33280065-33280078 chr11:33280086-33280099 chr11:33280095-33280108
45	BCLAF1	chr11:33182707-33183496	K562	blood:	n/a	chr11:33183037-33183050
46	BCLAF1	chr11:33280280-33280701	GM12878	blood:	n/a	n/a
47	BHLHE40	chr11:33200013-33200212	K562	blood:	n/a	n/a
48	BHLHE40	chr11:33278538-33280495	K562	blood:	n/a	chr11:33278914-33278930 chr11:33278754-33278770 chr11:33279027-33279043
49	BHLHE40	chr11:33279326-33280463	GM12878	blood:	n/a	n/a
50	BHLHE40	chr11:33308243-33308452	K562	blood:	n/a	n/a

(count:1895 , 50 per page) page: 1 2 3 4 5 6 7 ... 38

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:33278679-33278729	SK-N-SH	brain:	n/a
2	chr11:33217195-33217245	IMR90	lung:	fetal
3	chr11:33278752-33278802	AG04449	skin:	fetal
4	chr11:33334443-33334493	SK-N-SH_RA	brain:	n/a
5	chr11:33278679-33278729	SK-N-SH	brain:	n/a
6	chr11:33217195-33217245	IMR90	lung:	fetal
7	chr11:33278752-33278802	AG04449	skin:	fetal
8	chr11:33334443-33334493	SK-N-SH_RA	brain:	n/a
9	chr11:33317039-33317089	ovcar-3	ovarian:	n/a
10	chr11:33278752-33278802	GM06990	blood:	n/a
11	chr11:33280012-33280062	AG10803	skin:	n/a
12	chr11:33209645-33209695	BJ	skin:	n/a
13	chr11:33334443-33334493	GM12891	blood:	n/a
14	chr11:33278752-33278802	HL-60	blood:	n/a
15	chr11:33317039-33317089	HepG2	liver:	n/a
16	chr11:33276523-33276573	HPAEpiC	pulmonary alveolar:	n/a
17	chr11:33308269-33308319	HEK293	kidney:	embryo
18	chr11:33199839-33199889	Hepatocyte	liver:	n/a
19	chr11:33278186-33278236	SK-N-MC	brain:	n/a
20	chr11:33189542-33189592	HCT-116	colon:	n/a
21	chr11:33279084-33279134	SK-N-SH_RA	brain:	n/a
22	chr11:33279084-33279134	AG09319	gingival:	n/a
23	chr11:33279091-33279141	BJ	skin:	n/a
24	chr11:33317015-33317065	AoSMC	blood vessel:	n/a
25	chr11:33317039-33317089	IMR90	lung:	fetal
26	chr11:33280348-33280398	AG09319	gingival:	n/a
27	chr11:33279087-33279137	AG04449	skin:	fetal
28	chr11:33279084-33279134	AG09309	skin:	n/a
29	chr11:33189542-33189592	CMK	blood:	n/a
30	chr11:33279087-33279137	HRE	kidney:	n/a
31	chr11:33308269-33308319	Hela-S3	cervix:	n/a
32	chr11:33317093-33317143	NHDF-neo	bronchial:	n/a
33	chr11:33214297-33214347	SK-N-SH_RA	brain:	n/a
34	chr11:33280348-33280398	Caco-2	colon:	n/a
35	chr11:33282841-33282891	HCT-116	colon:	n/a
36	chr11:33211414-33211464	RPTEC	kidney:	n/a
37	chr11:33279091-33279141	NHBE	bronchial:	n/a
38	chr11:33278679-33278729	HCPEpiC	choroid plexus:	n/a
39	chr11:33185376-33185426	HL-60	blood:	n/a
40	chr11:33278679-33278729	Hepatocyte	liver:	n/a
41	chr11:33280012-33280062	NT2-D1	testis:	n/a
42	chr11:33279252-33279302	HIPEpiC	eye:	n/a
43	chr11:33211414-33211464	HNPCEpiC	eye:	n/a
44	chr11:33308269-33308319	AoSMC	blood vessel:	n/a
45	chr11:33279136-33279186	A549	lung:	n/a
46	chr11:33211414-33211464	HCPEpiC	choroid plexus:	n/a
47	chr11:33211414-33211464	SK-N-SH	brain:	n/a
48	chr11:33211414-33211464	HMEC	breast:	n/a
49	chr11:33265440-33265490	T-47D	breast:	n/a
50	chr11:33317015-33317065	HEK293	kidney:	embryo

(count:144 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr11:33294153..33295925-chr11:33303597..33306470,2	MCF-7	breast:
2	chr11:33272960..33276004-chr11:33277185..33279778,4	MCF-7	breast:
3	chr11:33290160..33295323-chr11:33296264..33299611,6	K562	blood:
4	chr11:33326071..33328703-chr11:33331126..33332666,2	K562	blood:
5	chr11:33180325..33183648-chr11:33198463..33201450,3	K562	blood:
6	chr11:32913171..32916144-chr11:33182605..33184521,3	K562	blood:
7	chr11:33279381..33279887-chr15:60689871..60690775,2	Hela-S3	cervix:
8	chr11:33308929..33311681-chr11:33352469..33354383,2	MCF-7	breast:
9	chr11:33284231..33286219-chr11:33288903..33290704,3	K562	blood:
10	chr11:33188152..33190790-chr11:33192662..33194860,2	K562	blood:
11	chr11:33287096..33288603-chr11:33295589..33298178,2	K562	blood:
12	chr11:33264545..33268685-chr11:33272682..33276323,4	MCF-7	breast:
13	chr11:33327923..33330739-chr11:33334207..33336221,2	K562	blood:
14	chr11:33180160..33185398-chr11:33277230..33283289,14	K562	blood:
15	chr11:33319935..33321547-chr11:33324870..33327830,2	K562	blood:
16	chr11:33181657..33184341-chr11:33279051..33282180,3	MCF-7	breast:
17	chr11:33323694..33328844-chr11:33341332..33344470,4	K562	blood:
18	chr11:33180418..33183694-chr11:33278346..33281012,5	MCF-7	breast:
19	chr11:33246053..33247762-chr11:33248545..33250079,2	K562	blood:
20	chr11:33107195..33109428-chr11:33181962..33183514,2	K562	blood:
21	chr11:33277785..33280697-chr11:33298696..33301567,3	K562	blood:
22	chr11:33279524..33280025-chr3:9437578..9438488,2	Hela-S3	cervix:
23	chr11:33266924..33271599-chr11:33276271..33279295,6	K562	blood:
24	chr11:33279068..33280061-chr11:67195914..67196832,2	Hela-S3	cervix:
25	chr11:33295510..33298168-chr11:33350276..33353237,2	K562	blood:
26	chr11:33249691..33251734-chr11:33277747..33280256,2	K562	blood:
27	chr11:33184452..33186716-chr11:33277546..33280813,3	MCF-7	breast:
28	chr11:33315778..33318693-chr11:33329241..33331442,2	K562	blood:
29	chr11:33278311..33281091-chr22:19157790..19160697,2	MCF-7	breast:
30	chr11:33278050..33279877-chr11:33311339..33315045,4	MCF-7	breast:
31	chr11:33278153..33279017-chr7:128379096..128379858,2	Hela-S3	cervix:
32	chr11:32911083..32916400-chr11:33180278..33184105,5	K562	blood:
33	chr11:33283955..33286219-chr11:33326919..33329577,2	K562	blood:
34	chr11:33272062..33275695-chr11:33277620..33281399,4	MCF-7	breast:
35	chr11:32914066..32915835-chr11:33278115..33280779,2	K562	blood:
36	chr11:33327923..33330739-chr11:33334207..33336221,2	K562	blood:
37	chr11:33278197..33279052-chr5:134240296..134240970,2	Hela-S3	cervix:
38	chr11:33187260..33188477-chr11:33350825..33351973,13	MCF-7	breast:
39	chr11:33206047..33208749-chr11:33277139..33279282,2	MCF-7	breast:
40	chr11:33326071..33328703-chr11:33331126..33332666,2	K562	blood:
41	chr11:33330031..33332498-chr11:33332591..33335075,2	MCF-7	breast:
42	chr11:33313913..33316207-chr11:33316446..33318411,2	MCF-7	breast:
43	chr11:33284231..33286219-chr11:33288903..33290704,3	K562	blood:
44	chr11:33290160..33295323-chr11:33296264..33299611,6	K562	blood:
45	chr11:33279534..33280463-chr2:39351094..39351986,2	Hela-S3	cervix:
46	chr11:33277371..33280516-chr11:33349638..33353162,5	MCF-7	breast:
47	chr11:33292487..33295323-chr11:33297832..33299611,2	K562	blood:
48	chr11:33300641..33303261-chr11:33311159..33314863,3	K562	blood:
49	chr11:33209345..33211297-chr11:33213358..33214880,2	K562	blood:
50	chr11:33253729..33256615-chr11:33278156..33280553,2	MCF-7	breast:

(count:14 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-TCP11L1-1	chr11:33210316-33210396	NONHSAT018691
2	lnc-CSTF3-4	chr11:33212346-33212446	NONHSAT018694
3	lnc-TCP11L1-1	chr11:33210316-33210396	ENSG00000247151
4	lnc-TCP11L1-4	chr11:33334713-33335041	expReg_chr11_2985_+
5	lnc-TCP11L1-1	chr11:33211479-33211840	ENSG00000247151
6	lnc-TCP11L1-1	chr11:33211479-33213142	NONHSAT018691
7	lnc-CSTF3-5	chr11:33222131-33222464	NONHSAT018696
8	lnc-CSTF3-4	chr11:33212459-33213144	NONHSAT018694
9	lnc-TCP11L1-1	chr11:33210914-33211103	ENSG00000247151
10	lnc-TCP11L1-3	chr11:33333205-33333598	expReg_chr11_2971_+
11	lnc-TCP11L1-1	chr11:33211479-33213144	ENSG00000247151
12	lnc-TCP11L1-1	chr11:33210316-33210396	ENSG00000247151
13	lnc-CSTF3-3	chr11:33211608-33212049	NONHSAT018693
14	lnc-TCP11L1-1	chr11:33210914-33211103	NONHSAT018691

No data

Variant related genes	Relation type
ENSG00000200485	TF binding region
ENSG00000206808	TF binding region
HIPK3	TF binding region
RPL29P23	TF binding region
CSTF3	TF binding region
ENSG00000241255	TF binding region
ENSG00000200485	CpG island
ENSG00000206808	CpG island
HIPK3	CpG island
RPL29P23	CpG island
CSTF3	CpG island
ENSG00000241255	CpG island
ENSG00000207972	chromatin interactions
ENSG00000085063	chromatin interactions
ENSG00000132570	chromatin interactions
ENSG00000199568	chromatin interactions
ENSG00000200485	chromatin interactions
ENSG00000079805	chromatin interactions
ENSG00000175634	chromatin interactions
ENSG00000130066	chromatin interactions
ENSG00000247151	chromatin interactions
ENSG00000060749	chromatin interactions
ENSG00000206573	chromatin interactions
ENSG00000135387	chromatin interactions
ENSG00000182718	chromatin interactions
ENSG00000134294	chromatin interactions
ENSG00000254718	chromatin interactions
ENSG00000206808	chromatin interactions
ENSG00000115904	chromatin interactions
ENSG00000102786	chromatin interactions
ENSG00000263004	chromatin interactions
ENSG00000260924	chromatin interactions
ENSG00000107745	chromatin interactions
ENSG00000236778	chromatin interactions
ENSG00000196331	chromatin interactions
ENSG00000110422	chromatin interactions
ENSG00000105479	chromatin interactions
ENSG00000176102	chromatin interactions
ENSG00000117335	chromatin interactions
ENSG00000128595	chromatin interactions
PSME3	miRNA target sites
ARID2	miRNA target sites
YWHAZ	miRNA target sites
MICALL1	miRNA target sites

Extended variants
information (count: 5430 )
Associated
traits (count: 80 )

Variant overlapped rSNPs/rCNVs (count:5430 , 50 per page) page: 1 2 3 4 5 6 7 ... 109

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs575000952	chr11:33183527-33183528	Active TSS Flanking Active TSS Enhancers ZNF genes & repeats Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
2	rs111603575	chr11:33183602-33183603	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
3	rs535934084	chr11:33183681-33183682	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
4	rs80134608	chr11:33183746-33183747	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
5	rs575901460	chr11:33183750-33183751	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
6	rs143208470	chr11:33183756-33183757	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
7	rs564917392	chr11:33183791-33183792	Active TSS Flanking Active TSS Enhancers Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
8	rs191302513	chr11:33183871-33183872	Flanking Active TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
9	rs112335056	chr11:33183908-33183909	Flanking Active TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
10	rs576954889	chr11:33183914-33183915	Flanking Active TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
11	rs560889134	chr11:33183915-33183916	Flanking Active TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
12	rs386752265	chr11:33183939-33183940	Flanking Active TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
13	rs201350790	chr11:33183941-33183942	Flanking Active TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
14	rs543508767	chr11:33183947-33183948	Flanking Active TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
15	rs199528588	chr11:33183952-33183953	Flanking Active TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
16	rs532516150	chr11:33183954-33183955	Flanking Active TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
17	rs143687377	chr11:33183955-33183956	Flanking Active TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
18	rs552143173	chr11:33183956-33183957	Flanking Active TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
19	rs34931687	chr11:33183961-33183962	Flanking Active TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
20	rs543221491	chr11:33183968-33183969	Flanking Active TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
21	rs528737651	chr11:33183984-33183985	Flanking Active TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
22	rs113749093	chr11:33183985-33183986	Flanking Active TSS Enhancers Active TSS Weak transcription	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
23	rs548881202	chr11:33184022-33184023	Weak transcription Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
24	rs568522087	chr11:33184067-33184068	Weak transcription Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
25	rs537655271	chr11:33184071-33184072	Weak transcription Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
26	rs557319399	chr11:33184085-33184086	Weak transcription Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
27	rs114602572	chr11:33184124-33184125	Weak transcription Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
28	rs538775807	chr11:33184160-33184161	Weak transcription Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
29	rs561204763	chr11:33184171-33184172	Weak transcription Enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
30	rs148575486	chr11:33184204-33184205	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
31	rs528762303	chr11:33184217-33184218	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
32	rs367595421	chr11:33184222-33184223	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
33	rs186628771	chr11:33184300-33184301	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
34	rs541297424	chr11:33184304-33184305	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
35	rs546935267	chr11:33184325-33184326	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
36	rs554855235	chr11:33184347-33184348	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region	4 gene(s)	Overlapped CNVs	n/a
37	rs142983162	chr11:33184357-33184358	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
38	rs112670688	chr11:33184388-33184389	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
39	rs571296355	chr11:33184396-33184397	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
40	rs4756102	chr11:33184404-33184405	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	3 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs191434917	chr11:33184472-33184473	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
42	rs545920083	chr11:33184518-33184519	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
43	rs559289890	chr11:33184519-33184520	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
44	rs555468376	chr11:33184526-33184527	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs528476368	chr11:33184549-33184550	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
46	rs35579027	chr11:33184580-33184581	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
47	rs548553682	chr11:33184584-33184585	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
48	rs150502013	chr11:33184597-33184598	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region	3 gene(s)	Overlapped CNVs	n/a
49	rs139451330	chr11:33184626-33184627	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs551140691	chr11:33184673-33184674	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:80)

Disease	PMID	Source
Breast cancer	17603634	CNVD
Medulloblastoma	21979893	CNVD
Thyroid cancer	19087340	CNVD
Melanoma	18172304	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Wilms tumour	21544195	CNVD
Parathyroid adenoma	22454399	CNVD
Chordoma	21602918	CNVD
Breast cancer	21949216	CNVD
Cancer	21637783	CNVD
Non-syndromic sensorineural hearing loss	19222835	CNVD
T-cell acute lymphoblastic leukemia	20065082	CNVD
Ewing''s sarcoma	21437220	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Astrocytoma	17387387	CNVD
Breast cancer	21264507	CNVD
Beckwith-Wiedemann syndrome	21518781	CNVD
Wilms tumour	21518781	CNVD
Hepatoblastoma	21518781	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Gastrointestinal stromal cancer	17535989	CNVD
Paraganglioma	17535989	CNVD
Pulmonary chondroma	17535989	CNVD
Gastric cancer	17908304	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Multiple myeloma	20724749	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Autism	22495311	CNVD
Prostate cancer	18632612	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Non-small cell lung cancer	21385341	CNVD
Intellectual disability	22102821	CNVD
Breast cancer	21785460	CNVD
Medulloblastoma	16783165	CNVD
small cell lung cancer	20016488	CNVD
Renal cell carcinoma	18194544	CNVD
Potocki-Shaffer syndrome	19222835	CNVD
WAGR syndrome	19222835	CNVD
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Chronic lymphocytic leukemia	20421269	CNVD
Breast cancer	21364760	CNVD
Glioblastoma multiforme	22286061	CNVD
Aniridia syndrome	21572526	CNVD
Myelofibrosis	22110671	CNVD
Breast cancer	16272173	CNVD
Retinoblastoma	22278416	CNVD
Denys-drash syndrome	21085971	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
WAGR syndrome	16773131	CNVD
Disorders of sex development	22290220	CNVD
Aniridia syndrome	17204608	CNVD
Mental retardation	17204608	CNVD
WAGR syndrome	19617690	CNVD
genitourinary abnormalities	17204608	CNVD
Breast cancer	16397240	CNVD
Mental retardation	16773131	CNVD
Multiple myeloma	16616336	CNVD
Cancer	17160897	CNVD
Cancer	21183584	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
WAGR syndrome	22470819	CNVD
Neurodevelopmental disorder	22521361	CNVD
Denys-drash syndrome	19566914	CNVD
Familial wilms tumor	19566914	CNVD
Frasier syndrome	19566914	CNVD
Non-small cell lung cancer	21829676	CNVD
WAGR syndrome	20603712	CNVD
Autism	17322880	CNVD
Renal cell carcinoma	18765545	CNVD
Breast cancer	21858162	CNVD
Cancer	20164920	CNVD
Breast cancer	16620391	CNVD
early-passage human iPS cells	21368824	CNVD
Breast cancer	22522925	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:3474 , 50 per page) page: 1 2 3 4 5 6 7 ... 70

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:33178000-33184800	Active TSS	GM12878-XiMat	blood
2	chr11:33180000-33183600	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr11:33180000-33183600	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr11:33180600-33183800	Active TSS	ES-I3 Cell Line	embryonic stem cell
5	chr11:33180600-33184000	Active TSS	H9 Cell Line	embryonic stem cell
6	chr11:33180800-33183600	Active TSS	HUES48 Cell Line	embryonic stem cell
7	chr11:33180800-33183600	Active TSS	HUES64 Cell Line	embryonic stem cell
8	chr11:33180800-33183800	Active TSS	iPS-15b Cell Line	embryonic stem cell
9	chr11:33180800-33183800	Active TSS	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr11:33180800-33184000	Active TSS	A549	lung
11	chr11:33181000-33183600	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
12	chr11:33181200-33183600	Active TSS	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr11:33181200-33183600	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
14	chr11:33181200-33183600	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
15	chr11:33181200-33183800	Active TSS	Brain Angular Gyrus	brain
16	chr11:33181400-33183600	Active TSS	H1 Cell Line	embryonic stem cell
17	chr11:33181400-33183600	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
18	chr11:33181400-33183600	Active TSS	Breast Myoepithelial Primary Cells	Breast
19	chr11:33181400-33183600	Active TSS	Right Atrium	heart
20	chr11:33181400-33183800	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
21	chr11:33181400-33183800	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
22	chr11:33181400-33183800	Active TSS	Fetal Lung	lung
23	chr11:33181600-33183600	Flanking Active TSS	Primary mononuclear cells fromperipheralblood	Blood
24	chr11:33181600-33183800	Flanking Active TSS	Primary hematopoietic stem cells	blood
25	chr11:33181600-33184000	Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
26	chr11:33181800-33183600	Active TSS	Aorta	Aorta
27	chr11:33181800-33183600	Active TSS	Colonic Mucosa	Colon
28	chr11:33181800-33183600	Active TSS	Left Ventricle	heart
29	chr11:33182000-33183600	Active TSS	Primary T killer memory cells from peripheral blood	blood
30	chr11:33182000-33183600	Active TSS	Dnd41	blood
31	chr11:33182200-33183600	Active TSS	Brain Cingulate Gyrus	brain
32	chr11:33182400-33183600	Active TSS	Primary T cells from cord blood	blood
33	chr11:33182600-33184000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
34	chr11:33183000-33183600	Enhancers	Stomach Mucosa	stomach
35	chr11:33183000-33183800	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
36	chr11:33183200-33183600	Flanking Active TSS	H9 Derived Neuron Cultured Cells	ES cell derived
37	chr11:33183200-33183600	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
38	chr11:33183200-33183600	Flanking Active TSS	Primary T helper memory cells from peripheral blood 1	blood
39	chr11:33183200-33183600	Flanking Active TSS	Primary T helper 17 cells PMA-I stimulated	--
40	chr11:33183200-33183600	Flanking Active TSS	Primary T helper cells fromperipheralblood	blood
41	chr11:33183200-33183600	Flanking Active TSS	Primary Natural Killer cells fromperipheralblood	blood
42	chr11:33183200-33183600	Flanking Active TSS	Primary T killer naive cells fromperipheralblood	blood
43	chr11:33183200-33183600	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
44	chr11:33183200-33183600	Flanking Active TSS	Adipose Nuclei	Adipose
45	chr11:33183200-33183600	Flanking Active TSS	Liver	Liver
46	chr11:33183200-33183600	Flanking Active TSS	Brain Anterior Caudate	brain
47	chr11:33183200-33183600	Flanking Active TSS	Duodenum Mucosa	Duodenum
48	chr11:33183200-33183600	Flanking Active TSS	Duodenum Smooth Muscle	Duodenum
49	chr11:33183200-33183600	Flanking Active TSS	Fetal Adrenal Gland	Adrenal Gland
50	chr11:33183200-33183600	Flanking Active TSS	Fetal Intestine Large	intestine

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