Variant report
Variant | nsv1037731 |
---|---|
Chromosome Location | chr14:19877060-20425497 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:2149)
- CpG islands (count:2870)
- Chromatin interactive region (count:5)
- LncRNA region (count:124)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr14:20346227-20346537 | HepG2 | liver: | n/a | n/a |
2 | ARID3A | chr14:20346241-20346527 | K562 | blood: | n/a | n/a |
3 | ARID3A | chr14:20387153-20387455 | HepG2 | liver: | n/a | n/a |
4 | ATF1 | chr14:20319622-20319703 | K562 | blood: | n/a | n/a |
5 | ATF1 | chr14:20374096-20374405 | K562 | blood: | n/a | n/a |
6 | ATF1 | chr14:20325048-20325100 | K562 | blood: | n/a | n/a |
7 | ATF1 | chr14:20388271-20388560 | K562 | blood: | n/a | n/a |
8 | BACH1 | chr14:20348120-20348235 | K562 | blood: | n/a | n/a |
9 | BATF | chr14:20131255-20131487 | GM12878 | blood: | n/a | n/a |
10 | BATF | chr14:19921485-19921738 | GM12878 | blood: | n/a | n/a |
11 | BATF | chr14:19937525-19937845 | GM12878 | blood: | n/a | chr14:19937698-19937709 |
12 | BATF | chr14:20026256-20026650 | GM12878 | blood: | n/a | n/a |
13 | BATF | chr14:20085953-20086237 | GM12878 | blood: | n/a | n/a |
14 | BATF | chr14:19986920-19987123 | GM12878 | blood: | n/a | n/a |
15 | BATF | chr14:20031700-20032016 | GM12878 | blood: | n/a | n/a |
16 | BATF | chr14:20025214-20025459 | GM12878 | blood: | n/a | n/a |
17 | BATF | chr14:19937503-19937859 | GM12878 | blood: | n/a | chr14:19937698-19937709 |
18 | BATF | chr14:20025031-20025541 | GM12878 | blood: | n/a | n/a |
19 | BCL11A | chr14:20084307-20084477 | GM12878 | blood: | n/a | n/a |
20 | BCL11A | chr14:19920793-19920958 | GM12878 | blood: | n/a | n/a |
21 | BCL11A | chr14:20025076-20025493 | GM12878 | blood: | n/a | chr14:20025351-20025360 |
22 | BCL11A | chr14:19937474-19937874 | GM12878 | blood: | n/a | n/a |
23 | BCL11A | chr14:19937603-19937812 | GM12878 | blood: | n/a | n/a |
24 | BCL11A | chr14:19921178-19921362 | GM12878 | blood: | n/a | n/a |
25 | BHLHE40 | chr14:20136685-20136689 | K562 | blood: | n/a | n/a |
26 | BHLHE40 | chr14:19984674-19984958 | HepG2 | liver: | n/a | n/a |
27 | BHLHE40 | chr14:19937479-19937774 | HepG2 | liver: | n/a | n/a |
28 | BHLHE40 | chr14:19933072-19933376 | HepG2 | liver: | n/a | n/a |
29 | BHLHE40 | chr14:19921007-19921253 | HepG2 | liver: | n/a | n/a |
30 | BHLHE40 | chr14:19925145-19925472 | HepG2 | liver: | n/a | n/a |
31 | BHLHE40 | chr14:19973726-19973967 | HepG2 | liver: | n/a | n/a |
32 | BHLHE40 | chr14:19978638-19978868 | HepG2 | liver: | n/a | n/a |
33 | BHLHE40 | chr14:19932458-19932823 | HepG2 | liver: | n/a | chr14:19932665-19932681 chr14:19932534-19932550 |
34 | BHLHE40 | chr14:19918428-19918670 | HepG2 | liver: | n/a | n/a |
35 | CBX3 | chr14:19925121-19925504 | K562 | blood: | n/a | n/a |
36 | CBX3 | chr14:19937708-19938010 | K562 | blood: | n/a | n/a |
37 | CBX3 | chr14:19925184-19925431 | K562 | blood: | n/a | n/a |
38 | CBX3 | chr14:19937536-19938018 | K562 | blood: | n/a | n/a |
39 | CEBPB | chr14:20347421-20347704 | K562 | blood: | n/a | n/a |
40 | CEBPB | chr14:19877398-19877707 | K562 | blood: | n/a | n/a |
41 | CEBPB | chr14:20144535-20144743 | IMR90 | lung: | n/a | chr14:20144569-20144580 |
42 | CEBPB | chr14:20279888-20280102 | A549 | lung: | n/a | n/a |
43 | CEBPB | chr14:20353091-20353443 | IMR90 | lung: | n/a | n/a |
44 | CEBPB | chr14:20374855-20375196 | IMR90 | lung: | n/a | chr14:20375036-20375045 chr14:20375036-20375047 chr14:20375036-20375045 chr14:20375034-20375045 chr14:20375036-20375045 chr14:20375034-20375047 chr14:20375036-20375047 chr14:20375036-20375045 chr14:20375034-20375047 |
45 | CEBPB | chr14:20420582-20420802 | HepG2 | liver: | n/a | chr14:20420660-20420671 |
46 | CEBPB | chr14:20346421-20346658 | HepG2 | liver: | n/a | chr14:20346574-20346585 |
47 | CEBPB | chr14:20245850-20246106 | IMR90 | lung: | n/a | chr14:20245944-20245955 |
48 | CEBPB | chr14:20374865-20375205 | K562 | blood: | n/a | chr14:20375036-20375045 chr14:20375036-20375047 chr14:20375036-20375045 chr14:20375034-20375045 chr14:20375036-20375045 chr14:20375034-20375047 chr14:20375036-20375047 chr14:20375036-20375045 chr14:20375034-20375047 |
49 | CEBPB | chr14:20365988-20366164 | HepG2 | liver: | n/a | n/a |
50 | CEBPB | chr14:20394073-20394339 | HepG2 | liver: | n/a | chr14:20394191-20394202 |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr14:19932946-19932996 | A549 | lung: | n/a |
2 | chr14:19932946-19932996 | NHDF-neo | bronchial: | n/a |
3 | chr14:20344394-20344444 | ProgFib | skin: | n/a |
4 | chr14:19932946-19932996 | A549 | lung: | n/a |
5 | chr14:19932946-19932996 | NHDF-neo | bronchial: | n/a |
6 | chr14:20344394-20344444 | ProgFib | skin: | n/a |
7 | chr14:20344394-20344444 | IMR90 | lung: | fetal |
8 | chr14:19890087-19890137 | SK-N-SH_RA | brain: | n/a |
9 | chr14:20136693-20136743 | HCPEpiC | choroid plexus: | n/a |
10 | chr14:19887082-19887132 | HepG2 | liver: | n/a |
11 | chr14:20295616-20295666 | GM19239 | blood: | n/a |
12 | chr14:19960920-19960970 | U87 | brain: | n/a |
13 | chr14:19890601-19890651 | GM06990 | blood: | n/a |
14 | chr14:19890601-19890651 | PrEC | prostate: | n/a |
15 | chr14:19932946-19932996 | Hepatocyte | liver: | n/a |
16 | chr14:20106919-20106969 | HMEC | breast: | n/a |
17 | chr14:20148103-20148153 | AG10803 | skin: | n/a |
18 | chr14:20012038-20012088 | U87 | brain: | n/a |
19 | chr14:20134518-20134568 | Jurkat | blood: | n/a |
20 | chr14:19962440-19962490 | HAEpiC | amniotic membrane: | n/a |
21 | chr14:19949555-19949605 | ECC-1 | luminal epithelium: | n/a |
22 | chr14:19925080-19925130 | HRCEpiC | kidney: | n/a |
23 | chr14:19960920-19960970 | Caco-2 | colon: | n/a |
24 | chr14:20147187-20147237 | RPTEC | kidney: | n/a |
25 | chr14:19962440-19962490 | MCF-7 | breast: | n/a |
26 | chr14:20148125-20148175 | GM12892 | blood: | n/a |
27 | chr14:20247697-20247747 | CMK | blood: | n/a |
28 | chr14:20020024-20020074 | HEEpiC | esophagus: | n/a |
29 | chr14:20387292-20387342 | NH-A | brain: | n/a |
30 | chr14:20344394-20344444 | GM12892 | blood: | n/a |
31 | chr14:20403239-20403289 | HEK293 | kidney: | embryo |
32 | chr14:20106919-20106969 | HUVEC | blood vessel: | n/a |
33 | chr14:19962440-19962490 | HRCEpiC | kidney: | n/a |
34 | chr14:19888434-19888484 | HAEpiC | amniotic membrane: | n/a |
35 | chr14:19960920-19960970 | HEK293 | kidney: | embryo |
36 | chr14:20012038-20012088 | ECC-1 | luminal epithelium: | n/a |
37 | chr14:20215980-20216030 | Jurkat | blood: | n/a |
38 | chr14:19932946-19932996 | GM12892 | blood: | n/a |
39 | chr14:20389177-20389227 | AG09309 | skin: | n/a |
40 | chr14:20020668-20020718 | SK-N-SH_RA | brain: | n/a |
41 | chr14:20139478-20139528 | ovcar-3 | ovarian: | n/a |
42 | chr14:19888629-19888679 | PrEC | prostate: | n/a |
43 | chr14:20146694-20146744 | HIPEpiC | eye: | n/a |
44 | chr14:20403845-20403895 | MCF10A-Er-Src | breast: | n/a |
45 | chr14:20134518-20134568 | NHDF-neo | bronchial: | n/a |
46 | chr14:20020024-20020074 | NHBE | bronchial: | n/a |
47 | chr14:19890087-19890137 | HUVEC | blood vessel: | n/a |
48 | chr14:20020024-20020074 | HepG2 | liver: | n/a |
49 | chr14:20344394-20344444 | BJ | skin: | n/a |
50 | chr14:19887082-19887132 | PFSK-1 | brain: | n/a |
(count:5 , 50 per page) page:
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr14:20378405..20379102-chr22:33621834..33622612,2 | MCF-7 | breast: | |
2 | chr14:20421291..20423829-chr14:20424473..20427279,2 | MCF-7 | breast: | |
3 | chr14:20382435..20385861-chr14:20389212..20390807,3 | K562 | blood: | |
4 | chr14:20330082..20332945-chr14:20336237..20338891,2 | K562 | blood: | |
5 | chr14:20382435..20385861-chr14:20389212..20390807,3 | K562 | blood: |
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-POTEM-2 | chr14:19921591-19921738 | ENSG00000244306 |
2 | lnc-POTEM-1 | chr14:19968877-19972292 | ENSG00000257931 |
3 | lnc-POTEM-1 | chr14:19955880-19955945 | ENSG00000257931 |
4 | lnc-POTEM-2 | chr14:19880209-19884029 | NONHSAT035503 |
5 | lnc-POTEM-2 | chr14:19925240-19925305 | ENSG00000244306 |
6 | lnc-POTEM-2 | chr14:19921359-19921470 | NONHSAT035520 |
7 | lnc-POTEM-2 | chr14:19883543-19884029 | ENSG00000244306 |
8 | lnc-POTEM-2 | chr14:19894700-19894790 | ENSG00000244306 |
9 | lnc-OR4N2-1 | chr14:20150010-20150118 | ENSG00000257395 |
10 | lnc-POTEM-2 | chr14:19923013-19923123 | NONHSAT035521 |
11 | lnc-POTEM-2 | chr14:19921359-19921470 | NONHSAT140152 |
12 | lnc-POTEM-2 | chr14:19925240-19925345 | ENSG00000244306 |
13 | lnc-POTEM-6 | chr14:19887445-19887497 | ENSG00000257898.1 |
14 | lnc-POTEM-2 | chr14:19921591-19921738 | ENSG00000244306 |
15 | lnc-POTEM-1 | chr14:19963420-19963645 | ENSG00000257931.2 |
16 | lnc-POTEM-2 | chr14:19894700-19894790 | ENSG00000244306 |
17 | lnc-POTEM-2 | chr14:19921359-19921470 | NONHSAT035521 |
18 | lnc-POTEM-2 | chr14:19881070-19881410 | ucscGeneNc_uc001vxa_1 |
19 | lnc-POTEM-2 | chr14:19919492-19919581 | ENSG00000244306 |
20 | lnc-POTEM-2 | chr14:19892138-19892361 | ENSG00000244306 |
21 | lnc-POTEM-2 | chr14:19921359-19921470 | ENSG00000244306 |
22 | lnc-POTEM-2 | chr14:19919492-19919629 | ENSG00000244306 |
23 | lnc-POTEM-2 | chr14:19880596-19880882 | ENSG00000244306 |
24 | lnc-POTEM-1 | chr14:19932012-19932316 | ENSG00000257931 |
25 | lnc-POTEM-2 | chr14:19919492-19919629 | NR_110526 |
26 | lnc-POTEM-2 | chr14:19912755-19913184 | ENSG00000244306 |
27 | lnc-POTEM-2 | chr14:19925240-19925300 | ENSG00000244306 |
28 | lnc-POTEM-2 | chr14:19884775-19884897 | ENSG00000244306 |
29 | lnc-POTEM-1 | chr14:19955880-19955945 | ENSG00000257931.2 |
30 | lnc-POTEM-2 | chr14:19891517-19892052 | ENSG00000244306 |
31 | lnc-POTEM-2 | chr14:19919138-19919273 | ENSG00000244306 |
32 | lnc-POTEM-2 | chr14:19893856-19894790 | ENSG00000244306 |
33 | lnc-OR4N2-1 | chr14:20149579-20149748 | ENSG00000257395 |
34 | lnc-POTEM-2 | chr14:19919492-19919629 | NONHSAT035503 |
35 | lnc-POTEM-2 | chr14:19925240-19925333 | NONHSAT035520 |
36 | lnc-POTEM-2 | chr14:19923009-19923123 | ENSG00000244306 |
37 | lnc-POTEM-2 | chr14:19919492-19919629 | ENSG00000244306 |
38 | lnc-POTEM-2 | chr14:19921591-19921738 | ENSG00000244306 |
39 | lnc-POTEM-2 | chr14:19883801-19884029 | ENSG00000244306 |
40 | lnc-POTEM-2 | chr14:19923013-19923123 | ENSG00000244306 |
41 | lnc-POTEM-2 | chr14:19921359-19921470 | ENSG00000244306 |
42 | lnc-POTEM-2 | chr14:19923013-19923123 | NR_110526 |
43 | lnc-POTEM-4 | chr14:20145803-20146140 | ENSG00000259069.1 |
44 | lnc-OR4N2-1 | chr14:20151685-20152898 | ENSG00000257395 |
45 | lnc-POTEM-2 | chr14:19919492-19919629 | ENSG00000244306 |
46 | lnc-POTEM-2 | chr14:19918476-19918662 | ENSG00000244306 |
47 | lnc-POTEM-2 | chr14:19919492-19919629 | ENSG00000244306 |
48 | lnc-POTEM-2 | chr14:19923013-19923068 | NONHSAT035522 |
49 | lnc-POTEM-2 | chr14:19894700-19894790 | ENSG00000244306 |
50 | lnc-OR4N2-4 | chr14:19894369-19894691 | ENSG00000215394 |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000259016 | TF binding region |
OR4K5 | TF binding region |
ENSG00000244306 | TF binding region |
ENSG00000257142 | TF binding region |
ENSG00000259069 | TF binding region |
OR4K4P | TF binding region |
ENSG00000257884 | TF binding region |
ENSG00000258324 | TF binding region |
OR4K3 | TF binding region |
ARHGAP42P4 | TF binding region |
ENSG00000238492 | TF binding region |
OR4K16P | TF binding region |
ENSG00000257846 | TF binding region |
BMS1P18 | TF binding region |
OR11H2 | TF binding region |
ENSG00000257357 | TF binding region |
ENSG00000257868 | TF binding region |
OR4N2 | TF binding region |
ENSG00000258027 | TF binding region |
OR4K1 | TF binding region |
MED15P6 | TF binding region |
OR4M1 | TF binding region |
OR11K2P | TF binding region |
ENSG00000257395 | TF binding region |
OR4N1P | TF binding region |
ENSG00000257493 | TF binding region |
OR4Q3 | TF binding region |
ENSG00000258276 | TF binding region |
OR4H12P | TF binding region |
ENSG00000257931 | TF binding region |
OR4K6P | TF binding region |
GRAMD4P4 | TF binding region |
ENSG00000257751 | TF binding region |
RNU6-1268P | TF binding region |
ENSG00000257977 | TF binding region |
ENSG00000257432 | TF binding region |
POTEM | TF binding region |
OR4K2 | TF binding region |
ENSG00000259016 | CpG island |
OR4K5 | CpG island |
ENSG00000244306 | CpG island |
ENSG00000257142 | CpG island |
ENSG00000259069 | CpG island |
OR4K4P | CpG island |
ENSG00000257884 | CpG island |
ENSG00000258324 | CpG island |
OR4K3 | CpG island |
ARHGAP42P4 | CpG island |
ENSG00000238492 | CpG island |
OR4K16P | CpG island |
ENSG00000257846 | CpG island |
BMS1P18 | CpG island |
OR11H2 | CpG island |
ENSG00000257357 | CpG island |
ENSG00000257868 | CpG island |
OR4N2 | CpG island |
ENSG00000258027 | CpG island |
OR4K1 | CpG island |
MED15P6 | CpG island |
OR4M1 | CpG island |
OR11K2P | CpG island |
ENSG00000257395 | CpG island |
OR4N1P | CpG island |
ENSG00000257493 | CpG island |
OR4Q3 | CpG island |
ENSG00000258276 | CpG island |
OR4H12P | CpG island |
ENSG00000257931 | CpG island |
OR4K6P | CpG island |
GRAMD4P4 | CpG island |
ENSG00000257751 | CpG island |
RNU6-1268P | CpG island |
ENSG00000257977 | CpG island |
ENSG00000257432 | CpG island |
POTEM | CpG island |
OR4K2 | CpG island |
ENSG00000176290 | chromatin interactions |
ENSG00000258822 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs112347668 | chr14:19878069-19878070 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
2 | rs116111797 | chr14:19878078-19878079 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
3 | rs183610156 | chr14:19878097-19878098 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
4 | rs188704255 | chr14:19878112-19878113 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
5 | rs559792128 | chr14:19878125-19878126 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
6 | rs533415631 | chr14:19878136-19878137 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
7 | rs77774152 | chr14:19878162-19878163 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
8 | rs113754282 | chr14:19878183-19878184 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
9 | rs569860297 | chr14:19878186-19878187 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
10 | rs72661549 | chr14:19878187-19878188 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
11 | rs374711775 | chr14:19878193-19878194 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
12 | rs200582753 | chr14:19878221-19878222 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
13 | rs549239757 | chr14:19878222-19878223 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
14 | rs567421667 | chr14:19878232-19878233 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
15 | rs368859796 | chr14:19878404-19878405 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
16 | rs202062072 | chr14:19878419-19878420 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
17 | rs552511737 | chr14:19878428-19878429 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
18 | rs577223310 | chr14:19878438-19878439 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
19 | rs181141059 | chr14:19878461-19878462 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
20 | rs146196558 | chr14:19878480-19878481 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
21 | rs28636498 | chr14:19878503-19878504 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
22 | rs368439428 | chr14:19878563-19878564 | Enhancers | n/a | n/a | Overlapped CNVs | n/a |
23 | rs373142970 | chr14:19880223-19880224 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
24 | rs560923600 | chr14:19880393-19880394 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
25 | rs377507852 | chr14:19880408-19880409 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
26 | rs546467886 | chr14:19880419-19880420 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
27 | rs571179833 | chr14:19880436-19880437 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
28 | rs370696599 | chr14:19880480-19880481 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
29 | rs532288359 | chr14:19880800-19880801 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
30 | rs550118999 | chr14:19880808-19880809 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
31 | rs568836455 | chr14:19880859-19880860 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
32 | rs535959905 | chr14:19880867-19880868 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
33 | rs554687445 | chr14:19880882-19880883 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
34 | rs375381403 | chr14:19880904-19880905 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
35 | rs367631003 | chr14:19880917-19880918 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
36 | rs370349132 | chr14:19880934-19880935 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
37 | rs375494041 | chr14:19880941-19880942 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
38 | rs368706431 | chr14:19880959-19880960 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
39 | rs567740807 | chr14:19880974-19880975 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
40 | rs535264547 | chr14:19880980-19880981 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
41 | rs553627635 | chr14:19881006-19881007 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
42 | rs2495118 | chr14:19881022-19881023 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
43 | rs61968489 | chr14:19881057-19881058 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
44 | rs578241919 | chr14:19881125-19881126 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
45 | rs545726236 | chr14:19881166-19881167 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
46 | rs202116778 | chr14:19881184-19881185 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
47 | rs557027508 | chr14:19881189-19881190 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
48 | rs376974029 | chr14:19881205-19881206 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
49 | rs575642388 | chr14:19881232-19881233 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
50 | rs542746624 | chr14:19881296-19881297 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Cancer | 20164920 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Retinoblastoma | 21504564 | CNVD |
High-proliferative meningiomas | 17937814 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Autism | 22495311 | CNVD |
Cone-rod dystrophy | 18421352 | CNVD |
T-cell acute lymphoblastic leukemia | 20065082 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Non-small cell lung cancer | 21044232 | CNVD |
Renal cell carcinoma | 19461508 | CNVD |
Cancer | 21637783 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Melanoma | 18172304 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Oral cancer | 21386901 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 21264507 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Breast cancer | 17899364 | CNVD |
Colorectal cancer | 16774939 | CNVD |
Neuroblastoma | 19435921 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Monoclonal gammopathy of undetermined significance | 17077331 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Alzheimer''s disease | 21482944 | CNVD |
Mental retardation | 19951919 | CNVD |
Neuroblastoma | 21899760 | CNVD |
Cutaneous T-cell lymphoma | 21881587 | CNVD |
Heart disease | 21282601 | CNVD |
Esophageal cancer | 20955586 | CNVD |
Neurodevelopmental disorder | 22521361 | CNVD |
Lung cancer | 16773561 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Cancer | 17440070 | CNVD |
Breast cancer | 16272173 | CNVD |
Oral squamous cell carcinoma | 17134496 | CNVD |
Epilepsy | 20736978 | CNVD |
Mental retardation | 20736978 | CNVD |
severe speech impairment | 20736978 | CNVD |
speech impairment | 20736978 | CNVD |
Gastrointestinal stromal cancer | 16982739 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Developmental delay | 21147756 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Lung cancer | 18438408 | CNVD |
Gastrointestinal stromal cancer | 20818650 | CNVD |
Renal cell carcinoma | 21668985 | CNVD |
Breast cancer | 21364760 | CNVD |
Prostate cancer | 18632612 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Pancreatic ductal adenocarcinoma | 19077451 | CNVD |
Chronic myeloid leukemia | 20724749 | CNVD |
Breast cancer | 22522925 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Breast cancer | 21509527 | CNVD |
Amyotrophic lateral sclerosis | 20685689 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Ependymoma | 20639864 | CNVD |
Autism | 20531469 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Ovarian cancer | 21720365 | CNVD |
Non-syndromic sensorineural hearing loss | 17431168 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr14:19878000-19878600 | Enhancers | Dnd41 | blood |
2 | chr14:19885600-19888800 | Weak transcription | A549 | lung |
3 | chr14:19887200-19890200 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
4 | chr14:19887400-19894400 | Weak transcription | HepG2 | liver |
5 | chr14:19888400-19888600 | Active TSS | HUES6 Cell Line | embryonic stem cell |
6 | chr14:19888400-19889000 | Enhancers | Placenta | Placenta |
7 | chr14:19888400-19891000 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
8 | chr14:19888600-19888800 | Flanking Bivalent TSS/Enh | HUES6 Cell Line | embryonic stem cell |
9 | chr14:19888600-19889000 | ZNF genes & repeats | iPS DF 6.9 Cell Line | embryonic stem cell |
10 | chr14:19888600-19890400 | ZNF genes & repeats | H1 Cell Line | embryonic stem cell |
11 | chr14:19888600-19891000 | ZNF genes & repeats | Fetal Adrenal Gland | Adrenal Gland |
12 | chr14:19888600-19891200 | ZNF genes & repeats | ES-UCSF4 Cell Line | embryonic stem cell |
13 | chr14:19888800-19889000 | ZNF genes & repeats | A549 | lung |
14 | chr14:19888800-19889200 | Bivalent/Poised TSS | HUES6 Cell Line | embryonic stem cell |
15 | chr14:19889000-19892600 | Weak transcription | A549 | lung |
16 | chr14:19889800-19891000 | ZNF genes & repeats | Foreskin Fibroblast Primary Cells skin02 | Skin |
17 | chr14:19890000-19891000 | ZNF genes & repeats | Dnd41 | blood |
18 | chr14:19890200-19891200 | Strong transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
19 | chr14:19890600-19891000 | ZNF genes & repeats | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
20 | chr14:19890800-19891000 | ZNF genes & repeats | Fetal Kidney | kidney |
21 | chr14:19890800-19891200 | ZNF genes & repeats | K562 | blood |
22 | chr14:19891000-19891200 | Enhancers | Dnd41 | blood |
23 | chr14:19891000-19893000 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
24 | chr14:19891200-19894200 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
25 | chr14:19893000-19893200 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
26 | chr14:19916600-19920400 | Weak transcription | HepG2 | liver |
27 | chr14:19919800-19920400 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
28 | chr14:19920400-19920800 | Flanking Active TSS | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
29 | chr14:19920400-19920800 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
30 | chr14:19920400-19920800 | Enhancers | HepG2 | liver |
31 | chr14:19920600-19920800 | Enhancers | Dnd41 | blood |
32 | chr14:19920800-19924400 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
33 | chr14:19920800-19924800 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
34 | chr14:19920800-19924800 | Weak transcription | HepG2 | liver |
35 | chr14:19921000-19921600 | Weak transcription | Dnd41 | blood |
36 | chr14:19921600-19922600 | Enhancers | Dnd41 | blood |
37 | chr14:19924400-19925200 | Active TSS | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
38 | chr14:19924800-19925200 | Active TSS | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
39 | chr14:19924800-19925200 | Active TSS | HepG2 | liver |
40 | chr14:19932800-19933400 | Active TSS | HepG2 | liver |
41 | chr14:19933000-19933400 | Active TSS | A549 | lung |
42 | chr14:20031400-20031800 | Enhancers | HepG2 | liver |
43 | chr14:20094600-20095000 | Enhancers | Adipose Nuclei | Adipose |
44 | chr14:20094600-20095000 | Enhancers | Placenta | Placenta |
45 | chr14:20136400-20136600 | Bivalent/Poised TSS | ES-WA7 Cell Line | embryonic stem cell |
46 | chr14:20136400-20137600 | Bivalent/Poised TSS | ES-I3 Cell Line | embryonic stem cell |
47 | chr14:20136400-20137800 | ZNF genes & repeats | HUES6 Cell Line | embryonic stem cell |
48 | chr14:20136400-20138000 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
49 | chr14:20136600-20136800 | Active TSS | ES-WA7 Cell Line | embryonic stem cell |
50 | chr14:20137200-20137800 | ZNF genes & repeats | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |