Variant report
Variant | nsv1038225 |
---|---|
Chromosome Location | chr14:19437975-20424926 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:4856)
- CpG islands (count:4768)
- Chromatin interactive region (count:5)
- LncRNA region (count:252)
- Mature miRNA region (count: 0)
- miRNA target sites (count:1)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr14:20387153-20387455 | HepG2 | liver: | n/a | n/a |
2 | ARID3A | chr14:20346241-20346527 | K562 | blood: | n/a | n/a |
3 | ARID3A | chr14:20346227-20346537 | HepG2 | liver: | n/a | n/a |
4 | ARID3A | chr14:19614565-19614964 | K562 | blood: | n/a | n/a |
5 | ATF1 | chr14:20374096-20374405 | K562 | blood: | n/a | n/a |
6 | ATF1 | chr14:19795048-19796237 | K562 | blood: | n/a | n/a |
7 | ATF1 | chr14:19614523-19614771 | K562 | blood: | n/a | n/a |
8 | ATF1 | chr14:19610591-19610826 | K562 | blood: | n/a | n/a |
9 | ATF1 | chr14:19792967-19794009 | K562 | blood: | n/a | n/a |
10 | ATF1 | chr14:19609027-19609227 | K562 | blood: | n/a | n/a |
11 | ATF1 | chr14:19450073-19450214 | K562 | blood: | n/a | n/a |
12 | ATF1 | chr14:20319622-20319703 | K562 | blood: | n/a | n/a |
13 | ATF1 | chr14:20388271-20388560 | K562 | blood: | n/a | n/a |
14 | ATF1 | chr14:20325048-20325100 | K562 | blood: | n/a | n/a |
15 | ATF1 | chr14:19461425-19461537 | K562 | blood: | n/a | n/a |
16 | ATF1 | chr14:19619825-19620010 | K562 | blood: | n/a | n/a |
17 | ATF1 | chr14:19464826-19465023 | K562 | blood: | n/a | n/a |
18 | ATF1 | chr14:19697695-19697910 | K562 | blood: | n/a | n/a |
19 | ATF1 | chr14:19462190-19462538 | K562 | blood: | n/a | n/a |
20 | ATF3 | chr14:19614578-19614850 | K562 | blood: | n/a | n/a |
21 | BACH1 | chr14:19464051-19464239 | K562 | blood: | n/a | n/a |
22 | BACH1 | chr14:19608951-19609223 | K562 | blood: | n/a | n/a |
23 | BACH1 | chr14:19438368-19438886 | K562 | blood: | n/a | n/a |
24 | BACH1 | chr14:19462184-19462510 | K562 | blood: | n/a | n/a |
25 | BACH1 | chr14:19614506-19614753 | K562 | blood: | n/a | n/a |
26 | BACH1 | chr14:19795663-19796213 | K562 | blood: | n/a | n/a |
27 | BACH1 | chr14:20348120-20348235 | K562 | blood: | n/a | n/a |
28 | BATF | chr14:20131255-20131487 | GM12878 | blood: | n/a | n/a |
29 | BATF | chr14:19937503-19937859 | GM12878 | blood: | n/a | chr14:19937698-19937709 |
30 | BATF | chr14:19637509-19637829 | GM12878 | blood: | n/a | chr14:19637679-19637690 |
31 | BATF | chr14:19541408-19541756 | GM12878 | blood: | n/a | n/a |
32 | BATF | chr14:20031700-20032016 | GM12878 | blood: | n/a | n/a |
33 | BATF | chr14:19586478-19586681 | GM12878 | blood: | n/a | n/a |
34 | BATF | chr14:19548036-19548546 | GM12878 | blood: | n/a | n/a |
35 | BATF | chr14:20026256-20026650 | GM12878 | blood: | n/a | n/a |
36 | BATF | chr14:20025214-20025459 | GM12878 | blood: | n/a | n/a |
37 | BATF | chr14:19827024-19827305 | GM12878 | blood: | n/a | n/a |
38 | BATF | chr14:19653590-19653843 | GM12878 | blood: | n/a | n/a |
39 | BATF | chr14:19637495-19637851 | GM12878 | blood: | n/a | chr14:19637679-19637690 |
40 | BATF | chr14:20025031-20025541 | GM12878 | blood: | n/a | n/a |
41 | BATF | chr14:19986920-19987123 | GM12878 | blood: | n/a | n/a |
42 | BATF | chr14:19937525-19937845 | GM12878 | blood: | n/a | chr14:19937698-19937709 |
43 | BATF | chr14:19487460-19487744 | GM12878 | blood: | n/a | n/a |
44 | BATF | chr14:19548118-19548363 | GM12878 | blood: | n/a | n/a |
45 | BATF | chr14:19541484-19541694 | GM12878 | blood: | n/a | n/a |
46 | BATF | chr14:19546952-19547321 | GM12878 | blood: | n/a | n/a |
47 | BATF | chr14:20085953-20086237 | GM12878 | blood: | n/a | n/a |
48 | BATF | chr14:19748478-19748726 | GM12878 | blood: | n/a | n/a |
49 | BATF | chr14:19921485-19921738 | GM12878 | blood: | n/a | n/a |
50 | BCL11A | chr14:19829015-19829207 | GM12878 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr14:20135228-20135278 | HMEC | breast: | n/a |
2 | chr14:19600442-19600492 | IMR90 | lung: | fetal |
3 | chr14:19602855-19602905 | SKMC | muscle: | n/a |
4 | chr14:20247697-20247747 | MCF10A-Er-Src | breast: | n/a |
5 | chr14:19585143-19585193 | HPAEpiC | pulmonary alveolar: | n/a |
6 | chr14:20403845-20403895 | HAEpiC | amniotic membrane: | n/a |
7 | chr14:20387292-20387342 | SK-N-SH | brain: | n/a |
8 | chr14:19562827-19562877 | HUVEC | blood vessel: | n/a |
9 | chr14:19641452-19641502 | HCT-116 | colon: | n/a |
10 | chr14:19950047-19950097 | Hepatocyte | liver: | n/a |
11 | chr14:20135228-20135278 | HMEC | breast: | n/a |
12 | chr14:19600442-19600492 | IMR90 | lung: | fetal |
13 | chr14:19602855-19602905 | SKMC | muscle: | n/a |
14 | chr14:20247697-20247747 | MCF10A-Er-Src | breast: | n/a |
15 | chr14:19585143-19585193 | HPAEpiC | pulmonary alveolar: | n/a |
16 | chr14:20403845-20403895 | HAEpiC | amniotic membrane: | n/a |
17 | chr14:20387292-20387342 | SK-N-SH | brain: | n/a |
18 | chr14:19562827-19562877 | HUVEC | blood vessel: | n/a |
19 | chr14:19641452-19641502 | HCT-116 | colon: | n/a |
20 | chr14:19950047-19950097 | Hepatocyte | liver: | n/a |
21 | chr14:20215980-20216030 | CMK | blood: | n/a |
22 | chr14:19858845-19858895 | NHBE | bronchial: | n/a |
23 | chr14:19960920-19960970 | HRCEpiC | kidney: | n/a |
24 | chr14:19614829-19614879 | MCF10A-Er-Src | breast: | n/a |
25 | chr14:20146694-20146744 | HepG2 | liver: | n/a |
26 | chr14:20295616-20295666 | HNPCEpiC | eye: | n/a |
27 | chr14:19960976-19961026 | SAEC | small airway: | n/a |
28 | chr14:20387292-20387342 | GM19239 | blood: | n/a |
29 | chr14:19925080-19925130 | HepG2 | liver: | n/a |
30 | chr14:19950047-19950097 | MCF10A-Er-Src | breast: | n/a |
31 | chr14:20136822-20136872 | NHDF-neo | bronchial: | n/a |
32 | chr14:19686672-19686722 | HNPCEpiC | eye: | n/a |
33 | chr14:19855113-19855163 | SKMC | muscle: | n/a |
34 | chr14:19949555-19949605 | HMEC | breast: | n/a |
35 | chr14:20215980-20216030 | HepG2 | liver: | n/a |
36 | chr14:19647166-19647216 | HEK293 | kidney: | embryo |
37 | chr14:20148103-20148153 | AG09319 | gingival: | n/a |
38 | chr14:19613906-19613956 | RPTEC | kidney: | n/a |
39 | chr14:19602149-19602199 | AG04450 | lung: | fetal |
40 | chr14:19641452-19641502 | U87 | brain: | n/a |
41 | chr14:19887082-19887132 | HIPEpiC | eye: | n/a |
42 | chr14:19613906-19613956 | T-47D | breast: | n/a |
43 | chr14:20137365-20137415 | PFSK-1 | brain: | n/a |
44 | chr14:19614556-19614606 | ovcar-3 | ovarian: | n/a |
45 | chr14:19643599-19643649 | HMEC | breast: | n/a |
46 | chr14:19888327-19888377 | SKMC | muscle: | n/a |
47 | chr14:20020024-20020074 | PANC-1 | pancreas: | n/a |
48 | chr14:19614829-19614879 | LNCaP | prostate: | n/a |
49 | chr14:19613906-19613956 | ProgFib | skin: | n/a |
50 | chr14:20146493-20146543 | ovcar-3 | ovarian: | n/a |
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No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr14:20382435..20385861-chr14:20389212..20390807,3 | K562 | blood: | |
2 | chr14:20378405..20379102-chr22:33621834..33622612,2 | MCF-7 | breast: | |
3 | chr14:20421291..20423829-chr14:20424473..20427279,2 | MCF-7 | breast: | |
4 | chr14:20330082..20332945-chr14:20336237..20338891,2 | K562 | blood: | |
5 | chr14:20382435..20385861-chr14:20389212..20390807,3 | K562 | blood: |
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-POTEM-1 | chr14:19963420-19963689 | ENSG00000257931 |
2 | lnc-POTEM-2 | chr14:19919492-19919629 | ENSG00000244306 |
3 | lnc-POTEG-5 | chr14:19859457-19859970 | ENSG00000258188.1 |
4 | lnc-POTEG-6 | chr14:19566012-19566082 | NR_027480 |
5 | lnc-POTEM-2 | chr14:19919138-19919273 | ENSG00000244306 |
6 | lnc-POTEG-7 | chr14:19595933-19596023 | NONHSAT035463 |
7 | lnc-POTEG-4 | chr14:19683336-19683870 | ENSG00000225210 |
8 | lnc-POTEM-7 | chr14:19670480-19671105 | ENSG00000228294 |
9 | lnc-POTEG-4 | chr14:19650055-19650126 | ENSG00000225210 |
10 | lnc-POTEG-4 | chr14:19680595-19681593 | ENSG00000225210 |
11 | lnc-POTEG-7 | chr14:19602828-19602942 | NONHSAT035463 |
12 | lnc-POTEM-1 | chr14:19944559-19944820 | ENSG00000257931 |
13 | lnc-POTEM-2 | chr14:19880059-19884029 | ENSG00000244306 |
14 | lnc-POTEM-3 | chr14:19940995-19941024 | ENSG00000249549 |
15 | lnc-POTEM-2 | chr14:19921591-19921738 | NONHSAT035503 |
16 | lnc-POTEG-6 | chr14:19571348-19571418 | NR_027480 |
17 | lnc-POTEM-2 | chr14:19894700-19894790 | ENSG00000244306 |
18 | lnc-POTEM-2 | chr14:19923013-19923123 | NONHSAT035521 |
19 | lnc-POTEG-4 | chr14:19680591-19680685 | ENSG00000225210 |
20 | lnc-POTEG-4 | chr14:19680595-19680685 | ENSG00000225210 |
21 | lnc-POTEM-2 | chr14:19919138-19919273 | ENSG00000244306 |
22 | lnc-POTEM-2 | chr14:19925240-19925346 | ENSG00000244306 |
23 | lnc-POTEM-2 | chr14:19923013-19923123 | NR_110526 |
24 | lnc-POTEM-2 | chr14:19925240-19925332 | ENSG00000244306 |
25 | lnc-POTEM-2 | chr14:19919134-19919273 | ENSG00000244306 |
26 | lnc-POTEG-6 | chr14:19563404-19563541 | NR_027480 |
27 | lnc-POTEM-2 | chr14:19925240-19925345 | ENSG00000244306 |
28 | lnc-POTEG-4 | chr14:19650037-19650126 | ENSG00000225210 |
29 | lnc-POTEM-2 | chr14:19921591-19921738 | NR_110526 |
30 | lnc-OR4N2-4 | chr14:19904259-19904571 | XLOC_010749 |
31 | lnc-POTEM-2 | chr14:19921591-19921738 | ENSG00000244306 |
32 | lnc-POTEG-6 | chr14:19558717-19558831 | NR_027480 |
33 | lnc-POTEM-2 | chr14:19921359-19921470 | NONHSAT140152 |
34 | lnc-POTEM-2 | chr14:19925240-19925333 | NONHSAT035503 |
35 | lnc-POTEM-2 | chr14:19894700-19894790 | ENSG00000244306 |
36 | lnc-POTEG-4 | chr14:19655734-19655798 | NONHSAT035478 |
37 | lnc-POTEM-2 | chr14:19919492-19919629 | NONHSAT140152 |
38 | lnc-POTEM-2 | chr14:19923013-19923123 | ENSG00000244306 |
39 | lnc-POTEG-4 | chr14:19680595-19680685 | ENSG00000225210 |
40 | lnc-POTEM-2 | chr14:19882464-19884029 | ENSG00000244306 |
41 | lnc-POTEM-2 | chr14:19921359-19921470 | NR_110526 |
42 | lnc-POTEM-2 | chr14:19919138-19919273 | ENSG00000244306 |
43 | lnc-POTEM-2 | chr14:19894700-19894731 | NONHSAT035499 |
44 | lnc-POTEM-2 | chr14:19894700-19894790 | ENSG00000244306 |
45 | lnc-POTEG-5 | chr14:19812176-19812247 | ENSG00000258188.1 |
46 | lnc-POTEM-15 | chr14:19458358-19458713 | NONHSAT035446 |
47 | lnc-POTEM-2 | chr14:19921648-19921738 | NONHSAT035522 |
48 | lnc-POTEM-1 | chr14:19935898-19936380 | ENSG00000257931 |
49 | lnc-POTEM-1 | chr14:19932012-19932316 | ENSG00000257931 |
50 | lnc-POTEM-2 | chr14:19856964-19857070 | NONHSAT035499 |
No data |
(count:1 , 50 per page) page:
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No. | miRNA target gene | miRNA name | Chromosome Location | mirBase accession |
---|---|---|---|---|
1 | POTEG | hsa-miR-26b-5p | chr14:19563442-19563464 |
Variant related genes | Relation type |
---|---|
OR11K2P | TF binding region |
ENSG00000259016 | TF binding region |
OR4K5 | TF binding region |
ENSG00000257891 | TF binding region |
GRAMD4P3 | TF binding region |
ENSG00000257395 | TF binding region |
OR4N1P | TF binding region |
ENSG00000244306 | TF binding region |
ENSG00000257493 | TF binding region |
ENSG00000257142 | TF binding region |
ENSG00000258265 | TF binding region |
ENSG00000257558 | TF binding region |
OR4Q3 | TF binding region |
ENSG00000259069 | TF binding region |
OR4K4P | TF binding region |
ENSG00000258276 | TF binding region |
ENSG00000257884 | TF binding region |
ENSG00000271632 | TF binding region |
ENSG00000258324 | TF binding region |
OR4K3 | TF binding region |
MED15P1 | TF binding region |
OR4H12P | TF binding region |
ENSG00000257931 | TF binding region |
ENSG00000257635 | TF binding region |
OR4K6P | TF binding region |
ARHGAP42P4 | TF binding region |
ENSG00000238492 | TF binding region |
OR4K16P | TF binding region |
ENSG00000257573 | TF binding region |
ENSG00000239200 | TF binding region |
ENSG00000225210 | TF binding region |
ENSG00000257846 | TF binding region |
BMS1P18 | TF binding region |
ENSG00000257310 | TF binding region |
GRAMD4P4 | TF binding region |
OR11H2 | TF binding region |
ENSG00000257357 | TF binding region |
ENSG00000257868 | TF binding region |
OR4N2 | TF binding region |
ENSG00000258314 | TF binding region |
ENSG00000257224 | TF binding region |
ENSG00000257751 | TF binding region |
RNU6-1268P | TF binding region |
OR11H13P | TF binding region |
ENSG00000257749 | TF binding region |
ENSG00000258188 | TF binding region |
ENSG00000258027 | TF binding region |
ENSG00000257977 | TF binding region |
OR4K1 | TF binding region |
ENSG00000258198 | TF binding region |
MED15P6 | TF binding region |
ENSG00000257432 | TF binding region |
POTEM | TF binding region |
OR4K2 | TF binding region |
RNU6-1239P | TF binding region |
OR4M1 | TF binding region |
BMS1P17 | TF binding region |
ENSG00000258781 | TF binding region |
ENSG00000258252 | TF binding region |
NF1P4 | TF binding region |
POTEG | TF binding region |
DUXAP10 | TF binding region |
OR11K2P | CpG island |
ENSG00000259016 | CpG island |
OR4K5 | CpG island |
ENSG00000257891 | CpG island |
GRAMD4P3 | CpG island |
ENSG00000257395 | CpG island |
OR4N1P | CpG island |
ENSG00000244306 | CpG island |
ENSG00000257493 | CpG island |
ENSG00000257142 | CpG island |
ENSG00000258265 | CpG island |
ENSG00000257558 | CpG island |
OR4Q3 | CpG island |
ENSG00000259069 | CpG island |
OR4K4P | CpG island |
ENSG00000258276 | CpG island |
ENSG00000257884 | CpG island |
ENSG00000271632 | CpG island |
ENSG00000258324 | CpG island |
OR4K3 | CpG island |
MED15P1 | CpG island |
OR4H12P | CpG island |
ENSG00000257931 | CpG island |
ENSG00000257635 | CpG island |
OR4K6P | CpG island |
ARHGAP42P4 | CpG island |
ENSG00000238492 | CpG island |
OR4K16P | CpG island |
ENSG00000257573 | CpG island |
ENSG00000239200 | CpG island |
ENSG00000225210 | CpG island |
ENSG00000257846 | CpG island |
BMS1P18 | CpG island |
ENSG00000257310 | CpG island |
GRAMD4P4 | CpG island |
OR11H2 | CpG island |
ENSG00000257357 | CpG island |
ENSG00000257868 | CpG island |
OR4N2 | CpG island |
ENSG00000258314 | CpG island |
ENSG00000257224 | CpG island |
ENSG00000257751 | CpG island |
RNU6-1268P | CpG island |
OR11H13P | CpG island |
ENSG00000257749 | CpG island |
ENSG00000258188 | CpG island |
ENSG00000258027 | CpG island |
ENSG00000257977 | CpG island |
OR4K1 | CpG island |
ENSG00000258198 | CpG island |
MED15P6 | CpG island |
ENSG00000257432 | CpG island |
POTEM | CpG island |
OR4K2 | CpG island |
RNU6-1239P | CpG island |
OR4M1 | CpG island |
BMS1P17 | CpG island |
ENSG00000258781 | CpG island |
ENSG00000258252 | CpG island |
NF1P4 | CpG island |
POTEG | CpG island |
DUXAP10 | CpG island |
ENSG00000176290 | chromatin interactions |
ENSG00000258822 | chromatin interactions |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs28706201 | chr14:19437976-19437977 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
2 | rs373949112 | chr14:19437978-19437979 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
3 | rs556266041 | chr14:19437985-19437986 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
4 | rs28553467 | chr14:19438002-19438003 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
5 | rs58967785 | chr14:19438077-19438078 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
6 | rs28609530 | chr14:19438109-19438110 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
7 | rs575735544 | chr14:19438127-19438128 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
8 | rs369724001 | chr14:19438139-19438140 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
9 | rs200327112 | chr14:19438143-19438144 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
10 | rs542831928 | chr14:19438144-19438145 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
11 | rs28581956 | chr14:19438150-19438151 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
12 | rs535863865 | chr14:19438157-19438158 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
13 | rs112630065 | chr14:19438158-19438159 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
14 | rs200224267 | chr14:19438163-19438164 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
15 | rs192486649 | chr14:19438167-19438168 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
16 | rs554807232 | chr14:19438181-19438182 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
17 | rs573208348 | chr14:19438224-19438225 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
18 | rs61971337 | chr14:19438229-19438230 | ZNF genes & repeats | n/a | n/a | LD-proxies of rSNPOverlapped rCNV | n/a |
19 | rs143647591 | chr14:19438239-19438240 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
20 | rs370443902 | chr14:19438244-19438245 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
21 | rs386775203 | chr14:19438284-19438285 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
22 | rs111954436 | chr14:19438285-19438286 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
23 | rs28682372 | chr14:19438286-19438287 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
24 | rs74549489 | chr14:19438287-19438288 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
25 | rs374262160 | chr14:19438288-19438289 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
26 | rs78188770 | chr14:19438292-19438293 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
27 | rs77885938 | chr14:19438309-19438310 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
28 | rs373617955 | chr14:19438310-19438311 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
29 | rs59904937 | chr14:19438311-19438312 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
30 | rs376869206 | chr14:19438312-19438313 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
31 | rs540186311 | chr14:19438359-19438360 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
32 | rs116114715 | chr14:19438360-19438361 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
33 | rs201556088 | chr14:19438371-19438372 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
34 | rs28540244 | chr14:19438381-19438382 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
35 | rs142638829 | chr14:19438402-19438403 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
36 | rs386775204 | chr14:19438465-19438466 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
37 | rs28537277 | chr14:19438466-19438467 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
38 | rs28671467 | chr14:19438472-19438473 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
39 | rs563025578 | chr14:19438502-19438503 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
40 | rs529822283 | chr14:19438551-19438552 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
41 | rs74033288 | chr14:19438561-19438562 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
42 | rs184517519 | chr14:19438568-19438569 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
43 | rs566734017 | chr14:19438569-19438570 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
44 | rs527587598 | chr14:19438572-19438573 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
45 | rs552553173 | chr14:19438615-19438616 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
46 | rs577005789 | chr14:19438636-19438637 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
47 | rs537884600 | chr14:19438645-19438646 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
48 | rs555955661 | chr14:19438674-19438675 | ZNF genes & repeats | n/a | n/a | Overlapped CNVs | n/a |
49 | rs568161254 | chr14:19438752-19438753 | ZNF genes & repeats | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
50 | rs28655231 | chr14:19438771-19438772 | ZNF genes & repeats | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Cancer | 20164920 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Retinoblastoma | 21504564 | CNVD |
High-proliferative meningiomas | 17937814 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Autism | 22495311 | CNVD |
Cone-rod dystrophy | 18421352 | CNVD |
T-cell acute lymphoblastic leukemia | 20065082 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Non-small cell lung cancer | 21044232 | CNVD |
Renal cell carcinoma | 19461508 | CNVD |
Cancer | 21637783 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Melanoma | 18172304 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Oral cancer | 21386901 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 21264507 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Breast cancer | 17899364 | CNVD |
Colorectal cancer | 16774939 | CNVD |
Neuroblastoma | 19435921 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Monoclonal gammopathy of undetermined significance | 17077331 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Schizophrenia | 20967226 | CNVD |
Autism | 19287141 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Urothelial carcinoma | 21177765 | CNVD |
Breast cancer | 17142309 | CNVD |
Rett syndrome | 21593744 | CNVD |
Breast cancer | 20369283 | CNVD |
Ovarian clear cell carcinoma | 21343371 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Incontinentia Pigmenti | 22033527 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Alzheimer''s disease | 21482944 | CNVD |
Mental retardation | 19951919 | CNVD |
Neuroblastoma | 21899760 | CNVD |
Cutaneous T-cell lymphoma | 21881587 | CNVD |
Heart disease | 21282601 | CNVD |
Esophageal cancer | 20955586 | CNVD |
Neurodevelopmental disorder | 22521361 | CNVD |
Lung cancer | 16773561 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Cancer | 17440070 | CNVD |
Breast cancer | 16272173 | CNVD |
Oral squamous cell carcinoma | 17134496 | CNVD |
Epilepsy | 20736978 | CNVD |
Mental retardation | 20736978 | CNVD |
severe speech impairment | 20736978 | CNVD |
speech impairment | 20736978 | CNVD |
Gastrointestinal stromal cancer | 16982739 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Breast cancer | 21364760 | CNVD |
Oligozoospermia | 20877625 | CNVD |
Sertoli-cell only syndrome | 20877625 | CNVD |
Williams Syndrome | 20824207 | CNVD |
Developmental delay | 21147756 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Lung cancer | 18438408 | CNVD |
Bladder cancer | 21909424 | CNVD |
Gastrointestinal stromal cancer | 20818650 | CNVD |
Renal cell carcinoma | 21668985 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Breast cancer | 22522925 | CNVD |
Prostate cancer | 18632612 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Ependymoma | 20639864 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Non-syndromic sensorineural hearing loss | 19587683 | CNVD |
Glioma | 20126413 | CNVD |
Pancreatic ductal adenocarcinoma | 19077451 | CNVD |
Schizophrenia | 23813976 | CNVD |
Chronic myeloid leukemia | 20724749 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Breast cancer | 21509527 | CNVD |
Amyotrophic lateral sclerosis | 20685689 | CNVD |
Autism | 20531469 | CNVD |
Non-syndromic sensorineural hearing loss | 22037309 | CNVD |
Ovarian cancer | 21720365 | CNVD |
Non-syndromic sensorineural hearing loss | 17431168 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr14:19435400-19439200 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
2 | chr14:19444400-19444800 | ZNF genes & repeats | Foreskin Fibroblast Primary Cells skin02 | Skin |
3 | chr14:19444400-19445200 | ZNF genes & repeats | Fetal Lung | lung |
4 | chr14:19444400-19445800 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
5 | chr14:19444400-19446000 | Active TSS | Fetal Heart | heart |
6 | chr14:19445000-19445200 | ZNF genes & repeats | iPS DF 6.9 Cell Line | embryonic stem cell |
7 | chr14:19462400-19462800 | ZNF genes & repeats | Fetal Kidney | kidney |
8 | chr14:19500000-19500200 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
9 | chr14:19597000-19597600 | ZNF genes & repeats | iPS DF 6.9 Cell Line | embryonic stem cell |
10 | chr14:19597200-19597600 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
11 | chr14:19607400-19609600 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
12 | chr14:19608600-19609200 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
13 | chr14:19610800-19612800 | Weak transcription | Fetal Lung | lung |
14 | chr14:19611000-19611200 | Enhancers | Lung | lung |
15 | chr14:19611200-19612800 | Weak transcription | Lung | lung |
16 | chr14:19612600-19615200 | Weak transcription | Right Atrium | heart |
17 | chr14:19612800-19613400 | ZNF genes & repeats | Fetal Kidney | kidney |
18 | chr14:19612800-19613400 | ZNF genes & repeats | Fetal Lung | lung |
19 | chr14:19612800-19613400 | ZNF genes & repeats | Lung | lung |
20 | chr14:19613000-19613200 | ZNF genes & repeats | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
21 | chr14:19613000-19613200 | ZNF genes & repeats | Gastric | stomach |
22 | chr14:19613000-19613200 | Bivalent Enhancer | K562 | blood |
23 | chr14:19613000-19613400 | ZNF genes & repeats | H1 Derived Mesenchymal Stem Cells | ES cell derived |
24 | chr14:19613000-19613400 | ZNF genes & repeats | H9 Cell Line | embryonic stem cell |
25 | chr14:19613000-19613400 | ZNF genes & repeats | iPS DF 6.9 Cell Line | embryonic stem cell |
26 | chr14:19613000-19613400 | ZNF genes & repeats | Fetal Brain Male | brain |
27 | chr14:19613000-19613400 | ZNF genes & repeats | Pancreas | Pancrea |
28 | chr14:19613000-19615000 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
29 | chr14:19613400-19614200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
30 | chr14:19613400-19614400 | Weak transcription | Pancreas | Pancrea |
31 | chr14:19613400-19614600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
32 | chr14:19613400-19616200 | Weak transcription | Fetal Lung | lung |
33 | chr14:19613600-19614200 | Weak transcription | Lung | lung |
34 | chr14:19614200-19614800 | ZNF genes & repeats | iPS DF 6.9 Cell Line | embryonic stem cell |
35 | chr14:19614200-19614800 | Active TSS | K562 | blood |
36 | chr14:19614400-19614800 | ZNF genes & repeats | Foreskin Fibroblast Primary Cells skin01 | Skin |
37 | chr14:19614400-19614800 | ZNF genes & repeats | Foreskin Fibroblast Primary Cells skin02 | Skin |
38 | chr14:19614400-19614800 | Bivalent Enhancer | Lung | lung |
39 | chr14:19614400-19614800 | ZNF genes & repeats | Pancreas | Pancrea |
40 | chr14:19614400-19615000 | Bivalent/Poised TSS | A549 | lung |
41 | chr14:19614600-19614800 | ZNF genes & repeats | H1 Derived Mesenchymal Stem Cells | ES cell derived |
42 | chr14:19614600-19614800 | Bivalent/Poised TSS | Colon Smooth Muscle | Colon |
43 | chr14:19614600-19614800 | Bivalent Enhancer | Right Ventricle | heart |
44 | chr14:19614800-19616000 | Weak transcription | Pancreas | Pancrea |
45 | chr14:19619800-19620000 | Bivalent Enhancer | A549 | lung |
46 | chr14:19641200-19641400 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
47 | chr14:19641200-19641400 | Enhancers | K562 | blood |
48 | chr14:19641200-19641600 | Active TSS | A549 | lung |
49 | chr14:19641200-19641600 | Active TSS | HepG2 | liver |
50 | chr14:19641600-19642800 | Weak transcription | HepG2 | liver |