Variant report

Variant nsv1039819
Chromosome Location chr12:38377445-38482975
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:182 , 50 per page) page: 1 2 3 4
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:38364400-38389200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr12:38377800-38387000 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
3 chr12:38378800-38387000 ZNF genes & repeats Adipose Nuclei Adipose
4 chr12:38379000-38383400 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
5 chr12:38379000-38391800 ZNF genes & repeats Liver Liver
6 chr12:38379600-38391000 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
7 chr12:38381400-38383600 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
8 chr12:38382000-38382600 Active TSS Aorta Aorta
9 chr12:38385000-38399600 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
10 chr12:38389400-38392600 ZNF genes & repeats Adipose Nuclei Adipose
11 chr12:38392000-38392400 Active TSS Fetal Heart heart
12 chr12:38393400-38396600 ZNF genes & repeats Adipose Nuclei Adipose
13 chr12:38394200-38396800 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
14 chr12:38395200-38397400 ZNF genes & repeats Liver Liver
15 chr12:38397400-38398400 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
16 chr12:38397600-38400200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr12:38399200-38399600 ZNF genes & repeats Liver Liver
18 chr12:38406200-38417400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr12:38408200-38409600 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
20 chr12:38408400-38408600 ZNF genes & repeats H9 Cell Line embryonic stem cell
21 chr12:38408400-38408800 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr12:38409600-38410000 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
23 chr12:38410200-38421200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr12:38411000-38420600 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
25 chr12:38414800-38421200 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
26 chr12:38417000-38418000 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
27 chr12:38417400-38418200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
28 chr12:38418200-38439600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr12:38424800-38425400 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
30 chr12:38433800-38435200 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
31 chr12:38436600-38441200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr12:38441200-38450200 ZNF genes & repeats HUES48 Cell Line embryonic stem cell
33 chr12:38442200-38452200 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
34 chr12:38442400-38450800 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
35 chr12:38443000-38448800 Weak transcription Right Atrium heart
36 chr12:38443400-38445800 ZNF genes & repeats Monocytes-CD14+_RO01746 blood
37 chr12:38443600-38445000 ZNF genes & repeats iPS-18 Cell Line embryonic stem cell
38 chr12:38443800-38444000 Bivalent Enhancer Stomach Smooth Muscle stomach
39 chr12:38443800-38444800 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
40 chr12:38443800-38444800 ZNF genes & repeats Primary T helper memory cells from peripheral blood 2 blood
41 chr12:38443800-38444800 ZNF genes & repeats Colonic Mucosa Colon
42 chr12:38443800-38444800 ZNF genes & repeats Skeletal Muscle Male skeletal muscle
43 chr12:38443800-38444800 ZNF genes & repeats Spleen Spleen
44 chr12:38443800-38445000 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
45 chr12:38443800-38445000 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
46 chr12:38443800-38445000 ZNF genes & repeats Primary T cells fromperipheralblood blood
47 chr12:38443800-38445000 ZNF genes & repeats Fetal Muscle Trunk muscle
48 chr12:38443800-38445000 ZNF genes & repeats Gastric stomach
49 chr12:38443800-38445200 ZNF genes & repeats hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr12:38443800-38445200 ZNF genes & repeats HUES6 Cell Line embryonic stem cell

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