Variant report

Variant	nsv1039841
Chromosome Location	chr15:52357448-52381377
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:922)
CpG islands
(count:183)
Chromatin interactive
region (count:88)
LncRNA
region (count:7)
Mature miRNA
region (count: 0)
miRNA target
sites (count:3)

(count:922 , 50 per page) page: 1 2 3 4 5 6 7 ... 19

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:52361888-52362214	HepG2	liver:	n/a	n/a
2	ARID3A	chr15:52369286-52369388	K562	blood:	n/a	n/a
3	ARID3A	chr15:52363908-52364196	HepG2	liver:	n/a	n/a
4	ARID3A	chr15:52380845-52380892	HepG2	liver:	n/a	n/a
5	ARID3A	chr15:52370520-52371354	HepG2	liver:	n/a	n/a
6	ATF1	chr15:52369187-52369507	K562	blood:	n/a	n/a
7	ATF2	chr15:52369038-52369763	GM12878	blood:	n/a	n/a
8	ATF2	chr15:52374724-52375267	GM12878	blood:	n/a	n/a
9	ATF2	chr15:52374774-52375274	GM12878	blood:	n/a	n/a
10	BATF	chr15:52369158-52369534	GM12878	blood:	n/a	chr15:52369343-52369353 chr15:52369342-52369353
11	BATF	chr15:52369125-52369570	GM12878	blood:	n/a	chr15:52369343-52369353 chr15:52369342-52369353
12	BATF	chr15:52375368-52375622	GM12878	blood:	n/a	n/a
13	BCL11A	chr15:52374843-52375269	GM12878	blood:	n/a	n/a
14	BCL11A	chr15:52374861-52375221	GM12878	blood:	n/a	n/a
15	BCL3	chr15:52369201-52369583	GM12878	blood:	n/a	n/a
16	BCL3	chr15:52369085-52369663	GM12878	blood:	n/a	n/a
17	BCLAF1	chr15:52374781-52375230	GM12878	blood:	n/a	n/a
18	BCLAF1	chr15:52371018-52371527	GM12878	blood:	n/a	n/a
19	BCLAF1	chr15:52374627-52375303	GM12878	blood:	n/a	n/a
20	BHLHE40	chr15:52369230-52369519	GM12878	blood:	n/a	n/a
21	BHLHE40	chr15:52363792-52364160	HepG2	liver:	n/a	n/a
22	BHLHE40	chr15:52363850-52364052	K562	blood:	n/a	n/a
23	BHLHE40	chr15:52371162-52371448	K562	blood:	n/a	n/a
24	BHLHE40	chr15:52369182-52369781	K562	blood:	n/a	n/a
25	BHLHE40	chr15:52374856-52375306	GM12878	blood:	n/a	n/a
26	CBX3	chr15:52378623-52378899	K562	blood:	n/a	n/a
27	CBX3	chr15:52378598-52379019	HCT-116	colon:	n/a	n/a
28	CCNT2	chr15:52360345-52360598	K562	blood:	n/a	n/a
29	CEBPB	chr15:52363801-52364172	K562	blood:	n/a	chr15:52363982-52363991 chr15:52363980-52363991 chr15:52363980-52363993 chr15:52363980-52363993 chr15:52363982-52363993
30	CEBPB	chr15:52363735-52364139	HepG2	liver:	n/a	chr15:52363982-52363991 chr15:52363980-52363991 chr15:52363980-52363993 chr15:52363980-52363993 chr15:52363982-52363993
31	CEBPB	chr15:52363497-52364350	MCF-7	breast:	n/a	chr15:52363982-52363991 chr15:52363980-52363991 chr15:52363980-52363993 chr15:52363980-52363993 chr15:52363982-52363993
32	CEBPB	chr15:52363762-52364185	HepG2	liver:	n/a	chr15:52363982-52363991 chr15:52363980-52363991 chr15:52363980-52363993 chr15:52363980-52363993 chr15:52363982-52363993
33	CEBPB	chr15:52368810-52369133	A549	lung:	n/a	chr15:52368960-52368971
34	CEBPB	chr15:52370561-52370815	HepG2	liver:	n/a	chr15:52370711-52370722 chr15:52370709-52370722 chr15:52370709-52370720
35	CEBPB	chr15:52368826-52369075	Hela-S3	cervix:	n/a	chr15:52368960-52368971
36	CEBPB	chr15:52368808-52369123	K562	blood:	n/a	chr15:52368960-52368971
37	CEBPB	chr15:52370429-52370914	HepG2	liver:	n/a	chr15:52370711-52370722 chr15:52370709-52370722 chr15:52370709-52370720
38	CEBPB	chr15:52363806-52364165	IMR90	lung:	n/a	chr15:52363982-52363991 chr15:52363980-52363991 chr15:52363980-52363993 chr15:52363980-52363993 chr15:52363982-52363993
39	CEBPB	chr15:52370504-52370897	HepG2	liver:	n/a	chr15:52370711-52370722 chr15:52370709-52370722 chr15:52370709-52370720
40	CEBPB	chr15:52361552-52362250	HepG2	liver:	n/a	chr15:52361807-52361820 chr15:52361807-52361820
41	CEBPB	chr15:52363526-52364525	MCF-7	breast:	n/a	chr15:52363982-52363991 chr15:52363980-52363991 chr15:52363980-52363993 chr15:52363980-52363993 chr15:52363982-52363993
42	CEBPB	chr15:52374732-52375336	GM12878	blood:	n/a	n/a
43	CEBPB	chr15:52363786-52364183	ECC-1	luminal epithelium:	n/a	chr15:52363982-52363991 chr15:52363980-52363991 chr15:52363980-52363993 chr15:52363980-52363993 chr15:52363982-52363993
44	CEBPB	chr15:52363834-52364097	HepG2	liver:	n/a	chr15:52363982-52363991 chr15:52363980-52363991 chr15:52363980-52363993 chr15:52363980-52363993 chr15:52363982-52363993
45	CEBPB	chr15:52363808-52364122	K562	blood:	n/a	chr15:52363982-52363991 chr15:52363980-52363991 chr15:52363980-52363993 chr15:52363980-52363993 chr15:52363982-52363993
46	CEBPB	chr15:52368797-52369636	IMR90	lung:	n/a	chr15:52368960-52368971
47	CEBPB	chr15:52377582-52377875	Hela-S3	cervix:	n/a	n/a
48	CEBPB	chr15:52361847-52362079	A549	lung:	n/a	n/a
49	CEBPB	chr15:52370383-52370950	HepG2	liver:	n/a	chr15:52370711-52370722 chr15:52370709-52370722 chr15:52370709-52370720
50	CEBPB	chr15:52370600-52370778	Hela-S3	cervix:	n/a	chr15:52370711-52370722 chr15:52370709-52370722 chr15:52370709-52370720

(count:183 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:52369237-52369287	BE2_C	brain:	n/a
2	chr15:52358353-52358403	HCF	heart:	n/a
3	chr15:52361955-52362005	AG09319	gingival:	n/a
4	chr15:52361955-52362005	SKMC	muscle:	n/a
5	chr15:52369237-52369287	HIPEpiC	eye:	n/a
6	chr15:52369237-52369287	NB4	blood:	n/a
7	chr15:52358353-52358403	HRE	kidney:	n/a
8	chr15:52369237-52369287	LNCaP	prostate:	n/a
9	chr15:52358353-52358403	K562	blood:	n/a
10	chr15:52369237-52369287	SK-N-SH_RA	brain:	n/a
11	chr15:52369237-52369287	HCM	heart:	n/a
12	chr15:52361955-52362005	SK-N-MC	brain:	n/a
13	chr15:52369237-52369287	H1-hESC	embryonic stem cell:	embryo
14	chr15:52361955-52362005	HCF	heart:	n/a
15	chr15:52369237-52369287	Hela-S3	cervix:	n/a
16	chr15:52361955-52362005	AG10803	skin:	n/a
17	chr15:52358353-52358403	Caco-2	colon:	n/a
18	chr15:52369237-52369287	IMR90	lung:	fetal
19	chr15:52361955-52362005	BJ	skin:	n/a
20	chr15:52358353-52358403	SK-N-SH	brain:	n/a
21	chr15:52361955-52362005	NH-A	brain:	n/a
22	chr15:52361955-52362005	ProgFib	skin:	n/a
23	chr15:52358353-52358403	H1-hESC	embryonic stem cell:	embryo
24	chr15:52369237-52369287	SK-N-MC	brain:	n/a
25	chr15:52358353-52358403	HRCEpiC	kidney:	n/a
26	chr15:52361955-52362005	GM19239	blood:	n/a
27	chr15:52361955-52362005	NB4	blood:	n/a
28	chr15:52358353-52358403	SKMC	muscle:	n/a
29	chr15:52361955-52362005	RPTEC	kidney:	n/a
30	chr15:52358353-52358403	HCM	heart:	n/a
31	chr15:52358353-52358403	SK-N-SH_RA	brain:	n/a
32	chr15:52361955-52362005	MCF10A-Er-Src	breast:	n/a
33	chr15:52369237-52369287	HMEC	breast:	n/a
34	chr15:52369237-52369287	HCPEpiC	choroid plexus:	n/a
35	chr15:52369237-52369287	HEEpiC	esophagus:	n/a
36	chr15:52369237-52369287	GM12878	blood:	n/a
37	chr15:52369237-52369287	GM12891	blood:	n/a
38	chr15:52369237-52369287	SKMC	muscle:	n/a
39	chr15:52358353-52358403	NT2-D1	testis:	n/a
40	chr15:52358353-52358403	AoSMC	blood vessel:	n/a
41	chr15:52358353-52358403	IMR90	lung:	fetal
42	chr15:52358353-52358403	NB4	blood:	n/a
43	chr15:52361955-52362005	LNCaP	prostate:	n/a
44	chr15:52369237-52369287	HNPCEpiC	eye:	n/a
45	chr15:52358353-52358403	PFSK-1	brain:	n/a
46	chr15:52358353-52358403	T-47D	breast:	n/a
47	chr15:52358353-52358403	HL-60	blood:	n/a
48	chr15:52369237-52369287	NH-A	brain:	n/a
49	chr15:52369237-52369287	A549	lung:	n/a
50	chr15:52358353-52358403	AG09309	skin:	n/a

(count:88 , 50 per page) page: 1 2

No.	Distal block	Cell Line	Cell type
1	chr15:52371710..52374413-chr15:52385596..52389516,3	MCF-7	breast:
2	chr15:52370736..52372537-chr15:52471693..52473323,2	MCF-7	breast:
3	chr15:52273987..52275289-chr15:52370394..52371967,22	MCF-7	breast:
4	chr15:52355832..52357497-chr15:52369964..52372920,2	MCF-7	breast:
5	chr15:52329669..52331948-chr15:52362152..52363907,2	MCF-7	breast:
6	chr15:52359987..52361803-chr15:52364183..52366513,2	K562	blood:
7	chr15:52342647..52344200-chr15:52358974..52361107,2	MCF-7	breast:
8	chr15:52362758..52365823-chr15:52370997..52373206,3	K562	blood:
9	chr15:52359015..52361742-chr15:52367466..52369559,2	MCF-7	breast:
10	chr15:52262485..52265375-chr15:52359294..52361353,2	MCF-7	breast:
11	chr15:52359410..52361152-chr15:52361561..52364348,3	MCF-7	breast:
12	chr15:52371129..52371827-chr15:52430855..52431660,3	MCF-7	breast:
13	chr15:52359015..52361742-chr15:52367466..52369559,2	MCF-7	breast:
14	chr15:52310063..52313646-chr15:52362500..52366264,6	MCF-7	breast:
15	chr15:52344231..52347096-chr15:52361163..52363365,2	K562	blood:
16	chr15:52274413..52275086-chr15:52368881..52369577,2	MCF-7	breast:
17	chr15:52263755..52264751-chr15:52370850..52371704,2	MCF-7	breast:
18	chr15:52074652..52075239-chr15:52370872..52371682,3	MCF-7	breast:
19	chr15:52351305..52354173-chr15:52357852..52359999,2	MCF-7	breast:
20	chr15:52371404..52373055-chr15:52373147..52374878,2	MCF-7	breast:
21	chr15:52348523..52350823-chr15:52362331..52364029,2	MCF-7	breast:
22	chr15:52362582..52365416-chr15:52366428..52369427,4	MCF-7	breast:
23	chr15:52263135..52264823-chr15:52362303..52364330,2	MCF-7	breast:
24	chr15:52362758..52364447-chr15:52370997..52373206,2	K562	blood:
25	chr15:52311665..52312617-chr15:52370871..52371422,2	MCF-7	breast:
26	chr15:52310998..52313546-chr15:52356718..52359024,2	MCF-7	breast:
27	chr15:52346904..52348485-chr15:52369068..52371304,2	MCF-7	breast:
28	chr15:52262482..52265786-chr15:52362257..52365520,5	MCF-7	breast:
29	chr15:52327404..52329717-chr15:52360419..52362718,2	MCF-7	breast:
30	chr15:52371333..52373042-chr15:52391102..52393252,2	MCF-7	breast:
31	chr15:52369845..52371701-chr15:52385019..52386714,2	MCF-7	breast:
32	chr15:52309334..52315760-chr15:52366746..52373412,20	MCF-7	breast:
33	chr15:52263873..52266562-chr15:52369853..52372558,3	MCF-7	breast:
34	chr15:52362196..52364059-chr15:52503832..52506248,2	K562	blood:
35	chr15:52377651..52380251-chr15:52438624..52441229,2	MCF-7	breast:
36	chr15:52362758..52364447-chr15:52370997..52373206,2	K562	blood:
37	chr15:52365247..52369257-chr15:52370072..52371646,3	MCF-7	breast:
38	chr15:52359987..52361803-chr15:52364183..52366513,2	K562	blood:
39	chr15:52371628..52374569-chr15:52379401..52381612,2	MCF-7	breast:
40	chr15:52272788..52276993-chr15:52369760..52371998,4	MCF-7	breast:
41	chr15:52267047..52268763-chr15:52371441..52374035,2	K562	blood:
42	chr15:52360023..52361929-chr15:52364183..52367724,3	K562	blood:
43	chr15:52348774..52350850-chr15:52362227..52365104,3	MCF-7	breast:
44	chr15:52367787..52369559-chr15:52372887..52374614,2	MCF-7	breast:
45	chr15:52354567..52357172-chr15:52358028..52360343,2	K562	blood:
46	chr15:52365247..52369257-chr15:52370072..52371646,3	MCF-7	breast:
47	chr15:52274218..52275165-chr15:52370716..52372312,7	MCF-7	breast:
48	chr15:52347158..52349875-chr15:52357794..52360368,2	K562	blood:
49	chr15:52308069..52314807-chr15:52359242..52376066,34	MCF-7	breast:
50	chr15:52360405..52361171-chr15:52370393..52371006,2	MCF-7	breast:

(count:7 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-MAPK6-13	chr15:52369355-52369810	NONHSAT043908
2	lnc-MAPK6-2	chr15:52374499-52374551	ENSG00000259178.1
3	lnc-MAPK6-2	chr15:52378514-52378771	ENSG00000259178.1
4	lnc-MAPK6-2	chr15:52378514-52378754	XLOC_011252
5	lnc-MAPK6-2	chr15:52376180-52376330	ENSG00000259178.1
6	lnc-MAPK6-13	chr15:52372326-52372524	NONHSAT043908
7	lnc-MAPK6-2	chr15:52375567-52375860	XLOC_011252

No data

(count:3 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location
1	MAPK6	hsa-miR-128-3p	chr15:52358050-52358070
2	MAPK6	hsa-miR-128-3p	chr15:52357659-52357680
3	MAPK6	hsa-miR-128-3p	chr15:52358063-52358069

Variant related genes	Relation type
ENSG00000259178	TF binding region
ENSG00000259178	CpG island
ENSG00000128872	chromatin interactions
ENSG00000166477	chromatin interactions
ENSG00000128833	chromatin interactions
ENSG00000259712	chromatin interactions
ENSG00000069956	chromatin interactions
ENSG00000259577	chromatin interactions
ENSG00000259178	chromatin interactions
ENSG00000069966	chromatin interactions
ENSG00000259438	chromatin interactions
ENSG00000242327	chromatin interactions

Extended variants
information (count: 1080 )
Associated
traits (count: 56 )

Variant overlapped rSNPs/rCNVs (count:1080 , 50 per page) page: 1 2 3 4 5 6 7 ... 22

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs575080376	chr15:52357449-52357450	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
2	rs542128701	chr15:52357457-52357458	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
3	rs187774960	chr15:52357460-52357461	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
4	rs3542	chr15:52357552-52357553	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
5	rs541380271	chr15:52357553-52357554	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
6	rs575216815	chr15:52357584-52357585	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
7	rs560295245	chr15:52357588-52357589	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
8	rs58936667	chr15:52357589-52357590	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs564239957	chr15:52357615-52357616	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
10	rs570947349	chr15:52357675-52357676	Weak transcription Strong transcription	Chromatin interactive region miRNA target site	3 gene(s)	Overlapped CNVs	n/a
11	rs528317738	chr15:52357763-52357764	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
12	rs574735983	chr15:52357771-52357772	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
13	rs567228101	chr15:52357786-52357787	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
14	rs542142107	chr15:52357802-52357803	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
15	rs563614299	chr15:52357856-52357857	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
16	rs546785428	chr15:52357862-52357863	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
17	rs192442196	chr15:52357887-52357888	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
18	rs201116439	chr15:52357938-52357939	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
19	rs113507272	chr15:52357940-52357941	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
20	rs112907912	chr15:52357943-52357944	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
21	rs113707949	chr15:52357944-52357945	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
22	rs61501443	chr15:52357946-52357947	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
23	rs550860005	chr15:52357967-52357968	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
24	rs568907820	chr15:52358023-52358024	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
25	rs532937502	chr15:52358039-52358040	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
26	rs76535650	chr15:52358065-52358066	Weak transcription Strong transcription	Chromatin interactive region miRNA target site	3 gene(s)	Overlapped CNVs	n/a
27	rs182410403	chr15:52358119-52358120	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
28	rs545706562	chr15:52358128-52358129	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
29	rs566580743	chr15:52358172-52358173	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
30	rs533605151	chr15:52358179-52358180	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
31	rs564180814	chr15:52358183-52358184	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
32	rs553552149	chr15:52358185-52358186	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
33	rs528190698	chr15:52358219-52358220	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
34	rs568524327	chr15:52358220-52358221	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
35	rs56367619	chr15:52358318-52358319	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
36	rs545362054	chr15:52358378-52358379	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
37	rs557207872	chr15:52358434-52358435	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
38	rs546534995	chr15:52358461-52358462	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
39	rs186756728	chr15:52358495-52358496	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
40	rs17540338	chr15:52358533-52358534	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
41	rs534434187	chr15:52358539-52358540	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
42	rs193004110	chr15:52358551-52358552	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
43	rs561935560	chr15:52358562-52358563	Weak transcription Strong transcription	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
44	rs529063224	chr15:52358603-52358604	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
45	rs544546806	chr15:52358611-52358612	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
46	rs141901816	chr15:52358632-52358633	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
47	rs562768545	chr15:52358655-52358656	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
48	rs140689993	chr15:52358670-52358671	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
49	rs150078684	chr15:52358672-52358673	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a
50	rs184557755	chr15:52358693-52358694	Weak transcription Strong transcription Genic enhancers	Chromatin interactive region	2 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:56)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21785460	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Basal cell lymphoma	17053054	CNVD
Breast cancer	22032731	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Hirschsprung''s Disease	21712996	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Cancer	21129771	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Abnormal phenotypes	18644119	CNVD
Cancer	16751803	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Ovarian clear cell carcinoma	21343371	CNVD
Myelofibrosis	22110671	CNVD
Pancreatic ductal adenocarcinoma	19077451	CNVD

Chromatin state (count:522 , 50 per page) page: 1 2 3 4 5 6 7 ... 11

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:52314400-52359800	Weak transcription	Fetal Brain Male	brain
2	chr15:52332600-52361800	Weak transcription	Gastric	stomach
3	chr15:52334000-52361400	Weak transcription	Small Intestine	intestine
4	chr15:52337600-52360600	Weak transcription	Pancreatic Islets	Pancreatic Islet
5	chr15:52339400-52359200	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
6	chr15:52340200-52362200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
7	chr15:52341600-52357600	Strong transcription	Cortex derived primary cultured neurospheres	brain
8	chr15:52341800-52358000	Strong transcription	iPS-18 Cell Line	embryonic stem cell
9	chr15:52343000-52359400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
10	chr15:52344600-52362000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
11	chr15:52345000-52357800	Strong transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr15:52345000-52358600	Strong transcription	HUES64 Cell Line	embryonic stem cell
13	chr15:52345200-52358000	Strong transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
14	chr15:52345600-52358000	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
15	chr15:52345600-52358800	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr15:52345600-52358800	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
17	chr15:52345800-52359200	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
18	chr15:52346200-52359000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
19	chr15:52347000-52357600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
20	chr15:52347200-52358800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
21	chr15:52347600-52358800	Strong transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
22	chr15:52347800-52357600	Strong transcription	HUES48 Cell Line	embryonic stem cell
23	chr15:52347800-52358800	Strong transcription	HSMM	muscle
24	chr15:52348000-52357600	Strong transcription	IMR90 fetal lung fibroblasts Cell Line	lung
25	chr15:52348000-52361200	Weak transcription	Stomach Mucosa	stomach
26	chr15:52348200-52358600	Strong transcription	Primary B cells from cord blood	blood
27	chr15:52348400-52358800	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
28	chr15:52348400-52359200	Strong transcription	NHDF-Ad	bronchial
29	chr15:52348600-52357800	Strong transcription	iPS-20b Cell Line	embryonic stem cell
30	chr15:52348800-52357600	Strong transcription	Skeletal Muscle Female	skeletal muscle
31	chr15:52349000-52357600	Strong transcription	Dnd41	blood
32	chr15:52349200-52357600	Strong transcription	ES-UCSF4 Cell Line	embryonic stem cell
33	chr15:52350600-52357600	Strong transcription	Duodenum Mucosa	Duodenum
34	chr15:52350600-52357800	Strong transcription	Adipose Nuclei	Adipose
35	chr15:52350800-52357600	Strong transcription	H1 Cell Line	embryonic stem cell
36	chr15:52350800-52357800	Strong transcription	Liver	Liver
37	chr15:52350800-52358600	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
38	chr15:52351000-52357600	Strong transcription	Primary mononuclear cells fromperipheralblood	Blood
39	chr15:52351000-52357600	Strong transcription	Monocytes-CD14+_RO01746	blood
40	chr15:52351200-52357600	Strong transcription	Primary monocytes fromperipheralblood	blood
41	chr15:52351800-52357800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
42	chr15:52352200-52359200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
43	chr15:52352200-52361400	Weak transcription	iPS-15b Cell Line	embryonic stem cell
44	chr15:52352200-52363600	Weak transcription	Placenta Amnion	Placenta Amnion
45	chr15:52352800-52358800	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
46	chr15:52352800-52359800	Weak transcription	Colonic Mucosa	Colon
47	chr15:52353000-52360000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
48	chr15:52353000-52361800	Weak transcription	Pancreas	Pancrea
49	chr15:52353000-52362200	Weak transcription	ES-I3 Cell Line	embryonic stem cell
50	chr15:52353200-52357800	Weak transcription	Psoas Muscle	Psoas

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