Variant report

Variant nsv1040028
Chromosome Location chr15:43893072-43992646
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:281 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:43871400-43898000 Weak transcription Gastric stomach
2 chr15:43887400-43894200 Weak transcription Placenta Placenta
3 chr15:43887400-43894400 Weak transcription Colonic Mucosa Colon
4 chr15:43887400-43894400 Weak transcription HMEC breast
5 chr15:43887400-43894400 Weak transcription NHEK skin
6 chr15:43887600-43894000 Weak transcription Rectal Smooth Muscle rectum
7 chr15:43888200-43894400 Weak transcription Esophagus oesophagus
8 chr15:43889200-43893600 Weak transcription H9 Cell Line embryonic stem cell
9 chr15:43889400-43894800 Weak transcription Rectal Mucosa Donor 29 rectum
10 chr15:43890000-43894400 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr15:43890000-43894400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
12 chr15:43890400-43894400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr15:43891400-43894400 Weak transcription HUES48 Cell Line embryonic stem cell
14 chr15:43891600-43893600 Weak transcription Rectal Mucosa Donor 31 rectum
15 chr15:43891600-43896600 Weak transcription Duodenum Mucosa Duodenum
16 chr15:43892000-43894400 Weak transcription Fetal Intestine Small intestine
17 chr15:43893000-43897200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr15:43893600-43893800 Enhancers Rectal Mucosa Donor 31 rectum
19 chr15:43893600-43894400 Enhancers Hela-S3 cervix
20 chr15:43894200-43894600 Enhancers Placenta Placenta
21 chr15:43894200-43894800 Bivalent Enhancer Fetal Muscle Leg muscle
22 chr15:43894400-43894600 Enhancers Cortex derived primary cultured neurospheres brain
23 chr15:43894400-43894600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr15:43894400-43894600 Enhancers Esophagus oesophagus
25 chr15:43894400-43894600 Enhancers NHEK skin
26 chr15:43895400-43895600 Bivalent Enhancer Fetal Muscle Leg muscle
27 chr15:43913400-43914400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
28 chr15:43914000-43914400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
29 chr15:43914200-43914600 Enhancers Fetal Intestine Small intestine
30 chr15:43914600-43937400 Weak transcription Fetal Intestine Small intestine
31 chr15:43915000-43915400 Enhancers Hela-S3 cervix
32 chr15:43915400-43941000 Weak transcription Hela-S3 cervix
33 chr15:43917000-43918000 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr15:43917200-43917800 Bivalent Enhancer IMR90 fetal lung fibroblasts Cell Line lung
35 chr15:43917400-43918000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
36 chr15:43917600-43917800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
37 chr15:43919600-43941600 Weak transcription Rectal Mucosa Donor 31 rectum
38 chr15:43920400-43941400 Weak transcription Brain Hippocampus Middle brain
39 chr15:43921000-43940600 Weak transcription Gastric stomach
40 chr15:43921400-43950400 Weak transcription Aorta Aorta
41 chr15:43921800-43952600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr15:43922200-43922600 Enhancers Placenta Placenta
43 chr15:43922800-43937600 Weak transcription Fetal Intestine Large intestine
44 chr15:43923200-43937400 Weak transcription Breast Myoepithelial Primary Cells Breast
45 chr15:43923200-43951800 Weak transcription Brain Inferior Temporal Lobe brain
46 chr15:43924200-43924800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr15:43925200-43939200 Weak transcription Brain Angular Gyrus brain
48 chr15:43925200-43939800 Weak transcription Brain Anterior Caudate brain
49 chr15:43929600-43940200 Weak transcription Primary hematopoietic stem cells short term culture blood
50 chr15:43929800-43937600 Weak transcription Skeletal Muscle Male skeletal muscle

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