Variant report
Variant | nsv1040110 |
---|---|
Chromosome Location | chr14:19382197-20105479 |
allele | n/a |
Outlinks | Ensembl   UCSC |
- TF binding region (count:4167)
- CpG islands (count:3357)
- Chromatin interactive region (count:0)
- LncRNA region (count:254)
- Mature miRNA region (count: 0)
- miRNA target sites (count:1)
No. | Transcrition factor | Chromosome Location | Cell Line | Cell type | Cell Stage | Matched TF binding sites |
---|---|---|---|---|---|---|
1 | ARID3A | chr14:19614565-19614964 | K562 | blood: | n/a | n/a |
2 | ATF1 | chr14:19436953-19437483 | K562 | blood: | n/a | n/a |
3 | ATF1 | chr14:19461425-19461537 | K562 | blood: | n/a | n/a |
4 | ATF1 | chr14:19610591-19610826 | K562 | blood: | n/a | n/a |
5 | ATF1 | chr14:19450073-19450214 | K562 | blood: | n/a | n/a |
6 | ATF1 | chr14:19609027-19609227 | K562 | blood: | n/a | n/a |
7 | ATF1 | chr14:19619825-19620010 | K562 | blood: | n/a | n/a |
8 | ATF1 | chr14:19795048-19796237 | K562 | blood: | n/a | n/a |
9 | ATF1 | chr14:19462190-19462538 | K562 | blood: | n/a | n/a |
10 | ATF1 | chr14:19614523-19614771 | K562 | blood: | n/a | n/a |
11 | ATF1 | chr14:19697695-19697910 | K562 | blood: | n/a | n/a |
12 | ATF1 | chr14:19792967-19794009 | K562 | blood: | n/a | n/a |
13 | ATF1 | chr14:19464826-19465023 | K562 | blood: | n/a | n/a |
14 | ATF3 | chr14:19614578-19614850 | K562 | blood: | n/a | n/a |
15 | BACH1 | chr14:19438368-19438886 | K562 | blood: | n/a | n/a |
16 | BACH1 | chr14:19614506-19614753 | K562 | blood: | n/a | n/a |
17 | BACH1 | chr14:19608951-19609223 | K562 | blood: | n/a | n/a |
18 | BACH1 | chr14:19464051-19464239 | K562 | blood: | n/a | n/a |
19 | BACH1 | chr14:19795663-19796213 | K562 | blood: | n/a | n/a |
20 | BACH1 | chr14:19462184-19462510 | K562 | blood: | n/a | n/a |
21 | BATF | chr14:19748478-19748726 | GM12878 | blood: | n/a | n/a |
22 | BATF | chr14:19637509-19637829 | GM12878 | blood: | n/a | chr14:19637679-19637690 |
23 | BATF | chr14:20031700-20032016 | GM12878 | blood: | n/a | n/a |
24 | BATF | chr14:19937525-19937845 | GM12878 | blood: | n/a | chr14:19937698-19937709 |
25 | BATF | chr14:19653590-19653843 | GM12878 | blood: | n/a | n/a |
26 | BATF | chr14:19548118-19548363 | GM12878 | blood: | n/a | n/a |
27 | BATF | chr14:19586478-19586681 | GM12878 | blood: | n/a | n/a |
28 | BATF | chr14:19546952-19547321 | GM12878 | blood: | n/a | n/a |
29 | BATF | chr14:19541408-19541756 | GM12878 | blood: | n/a | n/a |
30 | BATF | chr14:19827024-19827305 | GM12878 | blood: | n/a | n/a |
31 | BATF | chr14:20025214-20025459 | GM12878 | blood: | n/a | n/a |
32 | BATF | chr14:19986920-19987123 | GM12878 | blood: | n/a | n/a |
33 | BATF | chr14:19637495-19637851 | GM12878 | blood: | n/a | chr14:19637679-19637690 |
34 | BATF | chr14:20025031-20025541 | GM12878 | blood: | n/a | n/a |
35 | BATF | chr14:19541484-19541694 | GM12878 | blood: | n/a | n/a |
36 | BATF | chr14:19921485-19921738 | GM12878 | blood: | n/a | n/a |
37 | BATF | chr14:19548036-19548546 | GM12878 | blood: | n/a | n/a |
38 | BATF | chr14:19937503-19937859 | GM12878 | blood: | n/a | chr14:19937698-19937709 |
39 | BATF | chr14:20026256-20026650 | GM12878 | blood: | n/a | n/a |
40 | BATF | chr14:20085953-20086237 | GM12878 | blood: | n/a | n/a |
41 | BATF | chr14:19487460-19487744 | GM12878 | blood: | n/a | n/a |
42 | BCL11A | chr14:19637542-19637751 | GM12878 | blood: | n/a | n/a |
43 | BCL11A | chr14:19488926-19489115 | GM12878 | blood: | n/a | n/a |
44 | BCL11A | chr14:19826657-19827003 | GM12878 | blood: | n/a | n/a |
45 | BCL11A | chr14:19920793-19920958 | GM12878 | blood: | n/a | n/a |
46 | BCL11A | chr14:19776347-19776520 | GM12878 | blood: | n/a | n/a |
47 | BCL11A | chr14:20025076-20025493 | GM12878 | blood: | n/a | chr14:20025351-20025360 |
48 | BCL11A | chr14:19637480-19637880 | GM12878 | blood: | n/a | n/a |
49 | BCL11A | chr14:19819837-19820033 | GM12878 | blood: | n/a | n/a |
50 | BCL11A | chr14:19747489-19747677 | GM12878 | blood: | n/a | n/a |
No. | Chromosome Location | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr14:19613906-19613956 | T-47D | breast: | n/a |
2 | chr14:19402845-19402895 | AG04449 | skin: | fetal |
3 | chr14:19613906-19613956 | T-47D | breast: | n/a |
4 | chr14:19402845-19402895 | AG04449 | skin: | fetal |
5 | chr14:19625154-19625204 | PANC-1 | pancreas: | n/a |
6 | chr14:20020668-20020718 | ovcar-3 | ovarian: | n/a |
7 | chr14:19600442-19600492 | HEK293 | kidney: | embryo |
8 | chr14:19746900-19746950 | SAEC | small airway: | n/a |
9 | chr14:19964024-19964074 | GM12878 | blood: | n/a |
10 | chr14:19950047-19950097 | HNPCEpiC | eye: | n/a |
11 | chr14:19625820-19625870 | RPTEC | kidney: | n/a |
12 | chr14:19888629-19888679 | GM19239 | blood: | n/a |
13 | chr14:19855384-19855434 | HAEpiC | amniotic membrane: | n/a |
14 | chr14:19855384-19855434 | ECC-1 | luminal epithelium: | n/a |
15 | chr14:19625154-19625204 | Hela-S3 | cervix: | n/a |
16 | chr14:19888629-19888679 | BJ | skin: | n/a |
17 | chr14:19553612-19553662 | A549 | lung: | n/a |
18 | chr14:19562827-19562877 | NB4 | blood: | n/a |
19 | chr14:19855384-19855434 | NT2-D1 | testis: | n/a |
20 | chr14:20020024-20020074 | Jurkat | blood: | n/a |
21 | chr14:19964024-19964074 | K562 | blood: | n/a |
22 | chr14:19960920-19960970 | SK-N-SH_RA | brain: | n/a |
23 | chr14:19686155-19686205 | HMEC | breast: | n/a |
24 | chr14:20012038-20012088 | GM06990 | blood: | n/a |
25 | chr14:19602149-19602199 | PFSK-1 | brain: | n/a |
26 | chr14:19887082-19887132 | BE2_C | brain: | n/a |
27 | chr14:19747134-19747184 | GM12891 | blood: | n/a |
28 | chr14:19888327-19888377 | HCM | heart: | n/a |
29 | chr14:19959522-19959572 | PrEC | prostate: | n/a |
30 | chr14:19602149-19602199 | NH-A | brain: | n/a |
31 | chr14:19614829-19614879 | MCF-7 | breast: | n/a |
32 | chr14:19625154-19625204 | SK-N-SH_RA | brain: | n/a |
33 | chr14:19829406-19829456 | HCPEpiC | choroid plexus: | n/a |
34 | chr14:19625820-19625870 | NB4 | blood: | n/a |
35 | chr14:19888327-19888377 | NB4 | blood: | n/a |
36 | chr14:19932946-19932996 | HUVEC | blood vessel: | n/a |
37 | chr14:19887082-19887132 | HCM | heart: | n/a |
38 | chr14:19855384-19855434 | SAEC | small airway: | n/a |
39 | chr14:19890087-19890137 | NHDF-neo | bronchial: | n/a |
40 | chr14:19597077-19597127 | AG04449 | skin: | fetal |
41 | chr14:19585143-19585193 | SAEC | small airway: | n/a |
42 | chr14:20020024-20020074 | HCPEpiC | choroid plexus: | n/a |
43 | chr14:19686155-19686205 | U87 | brain: | n/a |
44 | chr14:19602855-19602905 | BJ | skin: | n/a |
45 | chr14:19585143-19585193 | HEK293 | kidney: | embryo |
46 | chr14:19858845-19858895 | PFSK-1 | brain: | n/a |
47 | chr14:20020024-20020074 | Hela-S3 | cervix: | n/a |
48 | chr14:19959522-19959572 | HL-60 | blood: | n/a |
49 | chr14:19600442-19600492 | AG10803 | skin: | n/a |
50 | chr14:19413192-19413242 | GM12891 | blood: | n/a |
No data |
No. | lncRNA name | Chromosome Location | lncRNA alias |
---|---|---|---|
1 | lnc-POTEM-2 | chr14:19880059-19884029 | ENSG00000244306 |
2 | lnc-POTEG-4 | chr14:19680595-19680685 | ENSG00000225210 |
3 | lnc-POTEG-4 | chr14:19652244-19652354 | NONHSAT035478 |
4 | lnc-POTEG-4 | chr14:19653893-19654004 | ENSG00000225210 |
5 | lnc-POTEM-2 | chr14:19921359-19921470 | ENSG00000244306 |
6 | lnc-POTEG-7 | chr14:19595933-19596023 | NONHSAT035463 |
7 | lnc-POTEM-2 | chr14:19925240-19925333 | NONHSAT035520 |
8 | lnc-POTEM-2 | chr14:19880596-19880882 | ENSG00000244306 |
9 | lnc-POTEG-4 | chr14:19653893-19654004 | NONHSAT035478 |
10 | lnc-POTEG-1 | chr14:19529958-19530169 | ENSG00000258265.1 |
11 | lnc-POTEG-7 | chr14:19597285-19597388 | NONHSAT035463 |
12 | lnc-POTEG-4 | chr14:19718326-19718379 | NONHSAT035478 |
13 | lnc-POTEM-2 | chr14:19894700-19894790 | ENSG00000244306 |
14 | lnc-POTEM-2 | chr14:19919492-19919629 | ENSG00000244306 |
15 | lnc-POTEM-2 | chr14:19925240-19925311 | ENSG00000244306 |
16 | lnc-POTEM-2 | chr14:19919138-19919273 | NR_110526 |
17 | lnc-OR4N2-3 | chr14:20008836-20010956 | NR_110505 |
18 | lnc-POTEM-2 | chr14:19921591-19921738 | ENSG00000244306 |
19 | lnc-POTEM-2 | chr14:19921591-19921738 | NONHSAT035503 |
20 | lnc-POTEM-2 | chr14:19881070-19881410 | ucscGeneNc_uc001vxa_1 |
21 | lnc-POTEM-2 | chr14:19921359-19921470 | NONHSAT035521 |
22 | lnc-POTEM-2 | chr14:19891517-19892052 | ENSG00000244306 |
23 | lnc-POTEG-4 | chr14:19680595-19680685 | ENSG00000225210 |
24 | lnc-OR4N2-3 | chr14:20006913-20007358 | ENSG00000258276 |
25 | lnc-POTEG-4 | chr14:19680595-19680685 | NONHSAT035478 |
26 | lnc-POTEM-1 | chr14:19944559-19944820 | ENSG00000257931 |
27 | lnc-POTEG-4 | chr14:19690487-19690609 | ENSG00000225210 |
28 | lnc-POTEM-2 | chr14:19925240-19925345 | ENSG00000244306 |
29 | lnc-POTEG-3 | chr14:19611695-19611964 | ENSG00000258314 |
30 | lnc-POTEM-2 | chr14:19921359-19921470 | ENSG00000244306 |
31 | lnc-POTEG-4 | chr14:19655782-19655871 | ENSG00000225210 |
32 | lnc-POTEM-2 | chr14:19921591-19921738 | ENSG00000244306 |
33 | lnc-POTEM-1 | chr14:19932012-19932316 | ENSG00000257931.2 |
34 | lnc-OR4N2-4 | chr14:19896785-19896872 | XLOC_010749 |
35 | lnc-POTEG-3 | chr14:19643072-19643377 | ENSG00000258314.2 |
36 | lnc-POTEM-2 | chr14:19925240-19925333 | NONHSAT035503 |
37 | lnc-POTEG-4 | chr14:19650060-19650126 | ENSG00000225210 |
38 | lnc-POTEM-2 | chr14:19919492-19919629 | ENSG00000244306 |
39 | lnc-POTEM-2 | chr14:19919492-19919581 | ENSG00000244306 |
40 | lnc-POTEM-1 | chr14:19955880-19955945 | ENSG00000257931 |
41 | lnc-POTEG-4 | chr14:19656089-19656224 | ENSG00000225210 |
42 | lnc-POTEM-2 | chr14:19921359-19921470 | ENSG00000244306 |
43 | lnc-POTEM-7 | chr14:19678513-19678600 | XLOC_010962 |
44 | lnc-POTEG-2 | chr14:19517501-19517607 | ENSG00000257891.1 |
45 | lnc-POTEM-6 | chr14:19837830-19837836 | ENSG00000257898.1 |
46 | lnc-POTEM-7 | chr14:19670792-19671105 | ENSG00000228294 |
47 | lnc-OR4N2-3 | chr14:20006913-20007358 | NR_110505 |
48 | lnc-POTEM-8 | chr14:19562689-19564808 | ENSG00000258252 |
49 | lnc-POTEM-2 | chr14:19921359-19921470 | NONHSAT140152 |
50 | lnc-POTEM-2 | chr14:19894700-19894790 | NONHSAT035503 |
No data |
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No. | miRNA target gene | miRNA name | Chromosome Location | mirBase accession |
---|---|---|---|---|
1 | POTEG | hsa-miR-26b-5p | chr14:19563442-19563464 |
Variant related genes | Relation type |
---|---|
GRAMD4P3 | TF binding region |
ENSG00000244306 | TF binding region |
ENSG00000258265 | TF binding region |
ENSG00000257558 | TF binding region |
ENSG00000258364 | TF binding region |
ENSG00000257504 | TF binding region |
ENSG00000257175 | TF binding region |
ENSG00000257573 | TF binding region |
ARHGAP42P5 | TF binding region |
BMS1P18 | TF binding region |
ENSG00000257357 | TF binding region |
ENSG00000257868 | TF binding region |
ENSG00000258314 | TF binding region |
OR11H13P | TF binding region |
ENSG00000257731 | TF binding region |
ENSG00000258027 | TF binding region |
ENSG00000258198 | TF binding region |
MED15P6 | TF binding region |
RNU6-1239P | TF binding region |
BMS1P17 | TF binding region |
ENSG00000258781 | TF binding region |
ENSG00000258252 | TF binding region |
NF1P4 | TF binding region |
ENSG00000257891 | TF binding region |
ENSG00000258076 | TF binding region |
ENSG00000258276 | TF binding region |
ENSG00000271632 | TF binding region |
MED15P1 | TF binding region |
ENSG00000257931 | TF binding region |
ENSG00000257635 | TF binding region |
ENSG00000257672 | TF binding region |
ENSG00000239200 | TF binding region |
ENSG00000225210 | TF binding region |
ENSG00000257310 | TF binding region |
GRAMD4P4 | TF binding region |
ENSG00000257224 | TF binding region |
RNU6-1268P | TF binding region |
ENSG00000257749 | TF binding region |
ENSG00000258188 | TF binding region |
ENSG00000257977 | TF binding region |
ENSG00000257432 | TF binding region |
POTEM | TF binding region |
ENSG00000257644 | TF binding region |
POTEG | TF binding region |
DUXAP10 | TF binding region |
GRAMD4P3 | CpG island |
ENSG00000244306 | CpG island |
ENSG00000258265 | CpG island |
ENSG00000257558 | CpG island |
ENSG00000258364 | CpG island |
ENSG00000257504 | CpG island |
ENSG00000257175 | CpG island |
ENSG00000257573 | CpG island |
ARHGAP42P5 | CpG island |
BMS1P18 | CpG island |
ENSG00000257357 | CpG island |
ENSG00000257868 | CpG island |
ENSG00000258314 | CpG island |
OR11H13P | CpG island |
ENSG00000257731 | CpG island |
ENSG00000258027 | CpG island |
ENSG00000258198 | CpG island |
MED15P6 | CpG island |
RNU6-1239P | CpG island |
BMS1P17 | CpG island |
ENSG00000258781 | CpG island |
ENSG00000258252 | CpG island |
NF1P4 | CpG island |
ENSG00000257891 | CpG island |
ENSG00000258076 | CpG island |
ENSG00000258276 | CpG island |
ENSG00000271632 | CpG island |
MED15P1 | CpG island |
ENSG00000257931 | CpG island |
ENSG00000257635 | CpG island |
ENSG00000257672 | CpG island |
ENSG00000239200 | CpG island |
ENSG00000225210 | CpG island |
ENSG00000257310 | CpG island |
GRAMD4P4 | CpG island |
ENSG00000257224 | CpG island |
RNU6-1268P | CpG island |
ENSG00000257749 | CpG island |
ENSG00000258188 | CpG island |
ENSG00000257977 | CpG island |
ENSG00000257432 | CpG island |
POTEM | CpG island |
ENSG00000257644 | CpG island |
POTEG | CpG island |
DUXAP10 | CpG island |
No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | rs200075830 | chr14:19389307-19389308 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
2 | rs572276773 | chr14:19389450-19389451 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
3 | rs61969997 | chr14:19389462-19389463 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
4 | rs539695307 | chr14:19389480-19389481 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
5 | rs61969998 | chr14:19389487-19389488 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
6 | rs199576637 | chr14:19389729-19389730 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
7 | rs200610431 | chr14:19389738-19389739 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
8 | rs573626430 | chr14:19390774-19390775 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
9 | rs74580404 | chr14:19390824-19390825 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
10 | rs541135598 | chr14:19390842-19390843 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
11 | rs77704721 | chr14:19390843-19390844 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
12 | rs201890645 | chr14:19390848-19390849 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
13 | rs527876486 | chr14:19390849-19390850 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
14 | rs200646044 | chr14:19403090-19403091 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
15 | rs537628062 | chr14:19403094-19403095 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
16 | rs201499575 | chr14:19403169-19403170 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
17 | rs199559481 | chr14:19403206-19403207 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
18 | rs556345784 | chr14:19403246-19403247 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
19 | rs111668312 | chr14:19403314-19403315 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
20 | rs61970029 | chr14:19403330-19403331 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
21 | rs61970030 | chr14:19403351-19403352 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
22 | rs564128162 | chr14:19406950-19406951 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
23 | rs199790270 | chr14:19406968-19406969 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
24 | rs576017576 | chr14:19407045-19407046 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
25 | rs543512210 | chr14:19407049-19407050 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
26 | rs562891113 | chr14:19407070-19407071 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
27 | rs530227441 | chr14:19407075-19407076 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
28 | rs548413310 | chr14:19407108-19407109 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
29 | rs560398137 | chr14:19407128-19407129 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
30 | rs199742475 | chr14:19407206-19407207 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
31 | rs200566280 | chr14:19407317-19407318 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
32 | rs61970053 | chr14:19407538-19407539 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
33 | rs528006000 | chr14:19407692-19407693 | Inactive region | TF binding regionlncRNA | 3 gene(s) | Overlapped CNVs | n/a |
34 | rs375201155 | chr14:19407714-19407715 | Inactive region | TF binding regionlncRNA | 3 gene(s) | Overlapped CNVs | n/a |
35 | rs570834517 | chr14:19407725-19407726 | Inactive region | TF binding regionlncRNA | 3 gene(s) | Overlapped CNVs | n/a |
36 | rs368081818 | chr14:19407726-19407727 | Inactive region | TF binding regionlncRNA | 3 gene(s) | Overlapped CNVs | n/a |
37 | rs537906403 | chr14:19407740-19407741 | Inactive region | TF binding regionlncRNA | 3 gene(s) | Overlapped CNVs | n/a |
38 | rs550246359 | chr14:19407747-19407748 | Inactive region | TF binding regionlncRNA | 3 gene(s) | Overlapped CNVs | n/a |
39 | rs568503854 | chr14:19407792-19407793 | Inactive region | TF binding regionlncRNA | 3 gene(s) | Overlapped CNVs | n/a |
40 | rs61970054 | chr14:19407819-19407820 | Inactive region | TF binding regionlncRNA | 3 gene(s) | Overlapped CNVs | n/a |
41 | rs535631669 | chr14:19407911-19407912 | Inactive region | TF binding regionlncRNA | 2 gene(s) | Overlapped CNVs | n/a |
42 | rs554040400 | chr14:19407924-19407925 | Inactive region | TF binding regionlncRNA | 2 gene(s) | Overlapped CNVs | n/a |
43 | rs565949825 | chr14:19408014-19408015 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
44 | rs539757761 | chr14:19408030-19408031 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
45 | rs557427171 | chr14:19408110-19408111 | Inactive region | TF binding region | 2 gene(s) | Overlapped CNVs | n/a |
46 | rs2027638 | chr14:19409171-19409172 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
47 | rs200578081 | chr14:19409239-19409240 | Inactive region | TF binding region | 1 gene(s) | Overlapped CNVs | n/a |
48 | rs201026949 | chr14:19409666-19409667 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
49 | rs371531146 | chr14:19409970-19409971 | Inactive region | lncRNA | n/a | Overlapped CNVs | n/a |
50 | rs568548118 | chr14:19410001-19410002 | Inactive region | TF binding regionlncRNA | 1 gene(s) | Overlapped CNVs | n/a |
Disease | PMID | Source |
---|---|---|
Cancer | 20164920 | CNVD |
Esophageal cancer | 21851588 | CNVD |
Ewing''s sarcoma | 21437220 | CNVD |
Glioblastoma multiforme | 21080181 | CNVD |
Retinoblastoma | 21504564 | CNVD |
High-proliferative meningiomas | 17937814 | CNVD |
Thoracic aortic aneurysm | 21092924 | CNVD |
Autism | 22495311 | CNVD |
Cone-rod dystrophy | 18421352 | CNVD |
T-cell acute lymphoblastic leukemia | 20065082 | CNVD |
T-cell prolymphocytic leukemia | 19278963 | CNVD |
Acute lymphoblastic leukemia | 20067559 | CNVD |
Non-small cell lung cancer | 21044232 | CNVD |
Renal cell carcinoma | 19461508 | CNVD |
Cancer | 21637783 | CNVD |
Colorectal cancer | 20709793 | CNVD |
Melanoma | 18172304 | CNVD |
Esophageal squamous carcinoma | 21637470 | CNVD |
Medulloblastoma | 21979893 | CNVD |
Oral cancer | 21386901 | CNVD |
Endometrial cancer | 22040021 | CNVD |
Breast cancer | 21264507 | CNVD |
Hepatocellular carcinoma | 22174799 | CNVD |
Breast cancer | 17899364 | CNVD |
Colorectal cancer | 16774939 | CNVD |
Neuroblastoma | 19435921 | CNVD |
Colorectal cancer | 19359472 | CNVD |
Gastrointestinal stromal cancer | 19259404 | CNVD |
Gastrointestinal stromal cancer | 17535989 | CNVD |
Monoclonal gammopathy of undetermined significance | 17077331 | CNVD |
Paraganglioma | 17535989 | CNVD |
Pulmonary chondroma | 17535989 | CNVD |
Endometrioid adenocarcinoma | 16974079 | CNVD |
Schizophrenia | 20967226 | CNVD |
Autism | 19287141 | CNVD |
early-passage human iPS cells | 21368824 | CNVD |
Breast cancer | 20932292 | CNVD |
Urothelial carcinoma | 21177765 | CNVD |
Breast cancer | 17142309 | CNVD |
Rett syndrome | 21593744 | CNVD |
Breast cancer | 20369283 | CNVD |
Ovarian clear cell carcinoma | 21343371 | CNVD |
Non-syndromic sensorineural hearing loss | 17122850 | CNVD |
Incontinentia Pigmenti | 22033527 | CNVD |
Myelofibrosis | 22110671 | CNVD |
Alzheimer''s disease | 21482944 | CNVD |
Mental retardation | 19951919 | CNVD |
Neuroblastoma | 21899760 | CNVD |
Cutaneous T-cell lymphoma | 21881587 | CNVD |
Heart disease | 21282601 | CNVD |
Esophageal cancer | 20955586 | CNVD |
Neurodevelopmental disorder | 22521361 | CNVD |
Lung cancer | 16773561 | CNVD |
Multiple myeloma | 16616336 | CNVD |
Cancer | 17440070 | CNVD |
Breast cancer | 16272173 | CNVD |
Oral squamous cell carcinoma | 17134496 | CNVD |
Epilepsy | 20736978 | CNVD |
Mental retardation | 20736978 | CNVD |
severe speech impairment | 20736978 | CNVD |
speech impairment | 20736978 | CNVD |
Gastrointestinal stromal cancer | 16982739 | CNVD |
small cell lung cancer | 20016488 | CNVD |
Breast cancer | 21364760 | CNVD |
Oligozoospermia | 20877625 | CNVD |
Sertoli-cell only syndrome | 20877625 | CNVD |
Ependymoma | 20639864 | CNVD |
Williams Syndrome | 20824207 | CNVD |
Developmental delay | 21147756 | CNVD |
Acute lymphoblastic leukemia | 20435627 | CNVD |
Lung cancer | 18438408 | CNVD |
Bladder cancer | 21909424 | CNVD |
Gastrointestinal stromal cancer | 20818650 | CNVD |
Renal cell carcinoma | 21668985 | CNVD |
Breast cancer | 22522925 | CNVD |
Non-syndromic sensorineural hearing loss | 18451855 | CNVD |
Pancreatic cancer | 17952125 | CNVD |
Non-syndromic sensorineural hearing loss | 21293372 | CNVD |
Prostate cancer | 18632612 | CNVD |
Hodgkin''s lymphoma | 17606441 | CNVD |
Non-syndromic sensorineural hearing loss | 19587683 | CNVD |
Glioma | 20126413 | CNVD |
Pancreatic ductal adenocarcinoma | 19077451 | CNVD |
Schizophrenia | 23813976 | CNVD |
Chronic myeloid leukemia | 20724749 | CNVD |
Breast cancer | 20668451 | CNVD |
Cancer | 20668451 | CNVD |
Lung cancer | 20668451 | CNVD |
Ovarian cancer | 20668451 | CNVD |
Pancreas cancer | 20668451 | CNVD |
Prostate cancer | 20668451 | CNVD |
Breast cancer | 21509527 | CNVD |
Amyotrophic lateral sclerosis | 20685689 | CNVD |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr14:19433200-19433800 | ZNF genes & repeats | HUES64 Cell Line | embryonic stem cell |
2 | chr14:19433600-19433800 | ZNF genes & repeats | iPS-20b Cell Line | embryonic stem cell |
3 | chr14:19435400-19439200 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
4 | chr14:19444400-19444800 | ZNF genes & repeats | Foreskin Fibroblast Primary Cells skin02 | Skin |
5 | chr14:19444400-19445200 | ZNF genes & repeats | Fetal Lung | lung |
6 | chr14:19444400-19445800 | ZNF genes & repeats | HUES48 Cell Line | embryonic stem cell |
7 | chr14:19444400-19446000 | Active TSS | Fetal Heart | heart |
8 | chr14:19445000-19445200 | ZNF genes & repeats | iPS DF 6.9 Cell Line | embryonic stem cell |
9 | chr14:19462400-19462800 | ZNF genes & repeats | Fetal Kidney | kidney |
10 | chr14:19500000-19500200 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
11 | chr14:19597000-19597600 | ZNF genes & repeats | iPS DF 6.9 Cell Line | embryonic stem cell |
12 | chr14:19597200-19597600 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
13 | chr14:19607400-19609600 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
14 | chr14:19608600-19609200 | Enhancers | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
15 | chr14:19610800-19612800 | Weak transcription | Fetal Lung | lung |
16 | chr14:19611000-19611200 | Enhancers | Lung | lung |
17 | chr14:19611200-19612800 | Weak transcription | Lung | lung |
18 | chr14:19612600-19615200 | Weak transcription | Right Atrium | heart |
19 | chr14:19612800-19613400 | ZNF genes & repeats | Fetal Kidney | kidney |
20 | chr14:19612800-19613400 | ZNF genes & repeats | Fetal Lung | lung |
21 | chr14:19612800-19613400 | ZNF genes & repeats | Lung | lung |
22 | chr14:19613000-19613200 | ZNF genes & repeats | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
23 | chr14:19613000-19613200 | ZNF genes & repeats | Gastric | stomach |
24 | chr14:19613000-19613200 | Bivalent Enhancer | K562 | blood |
25 | chr14:19613000-19613400 | ZNF genes & repeats | H1 Derived Mesenchymal Stem Cells | ES cell derived |
26 | chr14:19613000-19613400 | ZNF genes & repeats | H9 Cell Line | embryonic stem cell |
27 | chr14:19613000-19613400 | ZNF genes & repeats | iPS DF 6.9 Cell Line | embryonic stem cell |
28 | chr14:19613000-19613400 | ZNF genes & repeats | Fetal Brain Male | brain |
29 | chr14:19613000-19613400 | ZNF genes & repeats | Pancreas | Pancrea |
30 | chr14:19613000-19615000 | ZNF genes & repeats | iPS DF 19.11 Cell Line | embryonic stem cell |
31 | chr14:19613400-19614200 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
32 | chr14:19613400-19614400 | Weak transcription | Pancreas | Pancrea |
33 | chr14:19613400-19614600 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
34 | chr14:19613400-19616200 | Weak transcription | Fetal Lung | lung |
35 | chr14:19613600-19614200 | Weak transcription | Lung | lung |
36 | chr14:19614200-19614800 | ZNF genes & repeats | iPS DF 6.9 Cell Line | embryonic stem cell |
37 | chr14:19614200-19614800 | Active TSS | K562 | blood |
38 | chr14:19614400-19614800 | ZNF genes & repeats | Foreskin Fibroblast Primary Cells skin01 | Skin |
39 | chr14:19614400-19614800 | ZNF genes & repeats | Foreskin Fibroblast Primary Cells skin02 | Skin |
40 | chr14:19614400-19614800 | Bivalent Enhancer | Lung | lung |
41 | chr14:19614400-19614800 | ZNF genes & repeats | Pancreas | Pancrea |
42 | chr14:19614400-19615000 | Bivalent/Poised TSS | A549 | lung |
43 | chr14:19614600-19614800 | ZNF genes & repeats | H1 Derived Mesenchymal Stem Cells | ES cell derived |
44 | chr14:19614600-19614800 | Bivalent/Poised TSS | Colon Smooth Muscle | Colon |
45 | chr14:19614600-19614800 | Bivalent Enhancer | Right Ventricle | heart |
46 | chr14:19614800-19616000 | Weak transcription | Pancreas | Pancrea |
47 | chr14:19619800-19620000 | Bivalent Enhancer | A549 | lung |
48 | chr14:19641200-19641400 | Enhancers | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
49 | chr14:19641200-19641400 | Enhancers | K562 | blood |
50 | chr14:19641200-19641600 | Active TSS | A549 | lung |