Variant report

Variant nsv1040216
Chromosome Location chr15:53743780-53851679
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:295 , 50 per page) page: 1 2 3 4 5 6
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:53735400-53745200 Enhancers HepG2 liver
2 chr15:53739800-53745000 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr15:53740800-53744600 Weak transcription A549 lung
4 chr15:53740800-53750800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr15:53741000-53749400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
6 chr15:53741000-53752000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr15:53741200-53745000 Weak transcription Fetal Adrenal Gland Adrenal Gland
8 chr15:53743200-53747800 Enhancers Liver Liver
9 chr15:53743600-53744000 Enhancers Pancreas Pancrea
10 chr15:53744000-53745000 Weak transcription Pancreas Pancrea
11 chr15:53744400-53746400 Enhancers Rectal Mucosa Donor 31 rectum
12 chr15:53744600-53745800 Enhancers A549 lung
13 chr15:53744600-53746200 Enhancers Fetal Intestine Small intestine
14 chr15:53744600-53746400 Enhancers Fetal Intestine Large intestine
15 chr15:53744600-53747800 Enhancers Duodenum Mucosa Duodenum
16 chr15:53744800-53745200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr15:53745000-53745400 Enhancers Pancreas Pancrea
18 chr15:53745000-53745400 Enhancers Sigmoid Colon Sigmoid Colon
19 chr15:53745000-53746000 Enhancers Rectal Mucosa Donor 29 rectum
20 chr15:53745000-53747600 Enhancers Fetal Adrenal Gland Adrenal Gland
21 chr15:53745200-53745800 Flanking Active TSS HepG2 liver
22 chr15:53745400-53746200 Weak transcription Pancreas Pancrea
23 chr15:53745800-53746000 Flanking Active TSS A549 lung
24 chr15:53745800-53746200 Enhancers Stomach Mucosa stomach
25 chr15:53745800-53753000 Enhancers HepG2 liver
26 chr15:53746000-53746200 Enhancers A549 lung
27 chr15:53746200-53746400 Flanking Active TSS A549 lung
28 chr15:53746200-53747000 Enhancers Pancreas Pancrea
29 chr15:53746200-53747600 Weak transcription Fetal Intestine Small intestine
30 chr15:53746400-53747000 Enhancers A549 lung
31 chr15:53746800-53748000 Enhancers Small Intestine intestine
32 chr15:53747000-53748200 Flanking Active TSS A549 lung
33 chr15:53747000-53750600 Weak transcription Pancreas Pancrea
34 chr15:53747600-53748000 Enhancers Fetal Intestine Small intestine
35 chr15:53747800-53748000 Flanking Active TSS Liver Liver
36 chr15:53748000-53748200 Enhancers Liver Liver
37 chr15:53748200-53748400 Flanking Active TSS Liver Liver
38 chr15:53748200-53749800 Enhancers A549 lung
39 chr15:53748400-53753600 Weak transcription Liver Liver
40 chr15:53749200-53750200 Enhancers HUES48 Cell Line embryonic stem cell
41 chr15:53749200-53750800 Enhancers HUES64 Cell Line embryonic stem cell
42 chr15:53749400-53750200 Enhancers iPS-20b Cell Line embryonic stem cell
43 chr15:53749400-53750400 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr15:53749400-53750600 Enhancers iPS-18 Cell Line embryonic stem cell
45 chr15:53750600-53751400 Enhancers Pancreas Pancrea
46 chr15:53750800-53751200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr15:53751400-53754400 Weak transcription Pancreas Pancrea
48 chr15:53753000-53755200 Weak transcription Stomach Mucosa stomach
49 chr15:53753600-53754200 ZNF genes & repeats Liver Liver
50 chr15:53754400-53755200 Enhancers Pancreas Pancrea

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