Variant report

Variant nsv1040513
Chromosome Location chr9:115854339-115885060
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:115854400-115854800 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
2 chr9:115854800-115855200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
3 chr9:115855200-115855600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
4 chr9:115855600-115857200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
5 chr9:115857000-115857600 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr9:115857200-115858400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
7 chr9:115858400-115859000 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
8 chr9:115858800-115859000 ZNF genes & repeats H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr9:115858800-115859000 Bivalent Enhancer Breast Myoepithelial Primary Cells Breast
10 chr9:115858800-115859000 Enhancers Gastric stomach
11 chr9:115859000-115861800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr9:115859000-115862400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr9:115861600-115874000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
14 chr9:115861800-115862400 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr9:115862400-115862600 ZNF genes & repeats Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr9:115862400-115862800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
17 chr9:115862600-115866000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr9:115862800-115863600 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr9:115863600-115867000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
20 chr9:115866000-115867000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr9:115867000-115867400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr9:115867000-115867600 Genic enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr9:115867400-115874000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr9:115867600-115874000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr9:115873800-115874000 Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
26 chr9:115873800-115874000 Active TSS Adipose Nuclei Adipose
27 chr9:115873800-115874000 Enhancers Osteobl bone
28 chr9:115874000-115874200 Bivalent Enhancer Primary T cells fromperipheralblood blood
29 chr9:115874000-115874200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
30 chr9:115874000-115874200 Bivalent Enhancer Primary T helper naive cells from peripheral blood blood
31 chr9:115874000-115874200 Bivalent Enhancer Primary T helper naive cells fromperipheralblood blood
32 chr9:115874000-115874200 Bivalent Enhancer Primary T helper cells fromperipheralblood blood
33 chr9:115874000-115874200 Bivalent Enhancer Primary T killer memory cells from peripheral blood blood
34 chr9:115874000-115874200 Flanking Active TSS Adipose Nuclei Adipose
35 chr9:115874000-115874200 Enhancers Brain Cingulate Gyrus brain
36 chr9:115874000-115874200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
37 chr9:115874000-115874200 Enhancers Brain Substantia Nigra brain
38 chr9:115874000-115874200 Enhancers Placenta Placenta
39 chr9:115874000-115874400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr9:115874000-115874400 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
41 chr9:115874000-115874400 Enhancers Primary T helper cells PMA-I stimulated --
42 chr9:115874000-115874400 Bivalent Enhancer Primary Natural Killer cells fromperipheralblood blood
43 chr9:115874000-115874400 Enhancers Brain Anterior Caudate brain
44 chr9:115874000-115874400 Enhancers Brain Inferior Temporal Lobe brain
45 chr9:115874000-115874400 Bivalent Enhancer Skeletal Muscle Female skeletal muscle
46 chr9:115874000-115874400 Active TSS HSMMtube muscle
47 chr9:115874000-115874400 Active TSS NH-A brain
48 chr9:115874000-115874400 Flanking Active TSS Osteobl bone
49 chr9:115874000-115874600 Bivalent Enhancer Breast Myoepithelial Primary Cells Breast
50 chr9:115874000-115874600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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