Variant report

Variant nsv1040560
Chromosome Location chr12:11370919-11588024
allele n/a
Outlinks Ensembl   UCSC
Chromatin state (count:136 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:11362200-11371800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr12:11371800-11372600 ZNF genes & repeats Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
3 chr12:11379800-11381400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
4 chr12:11380400-11380800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
5 chr12:11381400-11381600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr12:11386400-11386800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
7 chr12:11386600-11386800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
8 chr12:11391200-11391600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr12:11391200-11391600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
10 chr12:11391200-11391600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
11 chr12:11391400-11392200 Enhancers iPS-15b Cell Line embryonic stem cell
12 chr12:11391600-11392600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr12:11392400-11392600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
14 chr12:11392600-11394000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
15 chr12:11392600-11397400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
16 chr12:11394000-11394600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
17 chr12:11394200-11394600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr12:11394200-11395200 Enhancers HMEC breast
19 chr12:11394600-11396200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
20 chr12:11395400-11395800 Enhancers HepG2 liver
21 chr12:11396200-11396600 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
22 chr12:11397400-11399800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
23 chr12:11398400-11405200 Weak transcription Primary T cells from cord blood blood
24 chr12:11398600-11399000 Active TSS Hela-S3 cervix
25 chr12:11399800-11400400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
26 chr12:11400400-11401200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr12:11401200-11401400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
28 chr12:11402400-11410800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
29 chr12:11403600-11403800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr12:11403800-11404400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr12:11405200-11407400 Strong transcription Primary T cells from cord blood blood
32 chr12:11407400-11440200 Weak transcription Primary T cells from cord blood blood
33 chr12:11418400-11418600 Bivalent Enhancer HUVEC blood vessel
34 chr12:11418600-11419200 Enhancers HUVEC blood vessel
35 chr12:11420200-11420400 ZNF genes & repeats Pancreas Pancrea
36 chr12:11420400-11423000 Weak transcription Pancreas Pancrea
37 chr12:11422400-11422600 Bivalent Enhancer Foreskin Melanocyte Primary Cells skin01 Skin
38 chr12:11423000-11423200 ZNF genes & repeats Pancreas Pancrea
39 chr12:11424400-11425000 Enhancers Fetal Adrenal Gland Adrenal Gland
40 chr12:11425000-11432400 Weak transcription Fetal Adrenal Gland Adrenal Gland
41 chr12:11426200-11427000 Enhancers HMEC breast
42 chr12:11429800-11433800 Weak transcription Liver Liver
43 chr12:11430600-11433200 Weak transcription Left Ventricle heart
44 chr12:11431000-11431200 Active TSS Adipose Nuclei Adipose
45 chr12:11431000-11433200 Weak transcription Primary T cells fromperipheralblood blood
46 chr12:11431200-11433400 Weak transcription Adipose Nuclei Adipose
47 chr12:11432400-11433000 Enhancers Fetal Adrenal Gland Adrenal Gland
48 chr12:11433400-11434000 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr12:11433400-11434200 Strong transcription Adipose Nuclei Adipose
50 chr12:11433800-11434000 ZNF genes & repeats Liver Liver

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