Variant report
Variant | nsv1040560 |
---|---|
Chromosome Location | chr12:11370919-11588024 |
allele | n/a |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr12:11362200-11371800 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
2 | chr12:11371800-11372600 | ZNF genes & repeats | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
3 | chr12:11379800-11381400 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
4 | chr12:11380400-11380800 | Enhancers | Foreskin Melanocyte Primary Cells skin01 | Skin |
5 | chr12:11381400-11381600 | Enhancers | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
6 | chr12:11386400-11386800 | Enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
7 | chr12:11386600-11386800 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
8 | chr12:11391200-11391600 | Enhancers | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
9 | chr12:11391200-11391600 | Enhancers | iPS DF 19.11 Cell Line | embryonic stem cell |
10 | chr12:11391200-11391600 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
11 | chr12:11391400-11392200 | Enhancers | iPS-15b Cell Line | embryonic stem cell |
12 | chr12:11391600-11392600 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
13 | chr12:11392400-11392600 | Enhancers | Foreskin Melanocyte Primary Cells skin01 | Skin |
14 | chr12:11392600-11394000 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
15 | chr12:11392600-11397400 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
16 | chr12:11394000-11394600 | Enhancers | Foreskin Melanocyte Primary Cells skin01 | Skin |
17 | chr12:11394200-11394600 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
18 | chr12:11394200-11395200 | Enhancers | HMEC | breast |
19 | chr12:11394600-11396200 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
20 | chr12:11395400-11395800 | Enhancers | HepG2 | liver |
21 | chr12:11396200-11396600 | Enhancers | Foreskin Melanocyte Primary Cells skin01 | Skin |
22 | chr12:11397400-11399800 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
23 | chr12:11398400-11405200 | Weak transcription | Primary T cells from cord blood | blood |
24 | chr12:11398600-11399000 | Active TSS | Hela-S3 | cervix |
25 | chr12:11399800-11400400 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
26 | chr12:11400400-11401200 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
27 | chr12:11401200-11401400 | Enhancers | Foreskin Melanocyte Primary Cells skin03 | Skin |
28 | chr12:11402400-11410800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
29 | chr12:11403600-11403800 | Enhancers | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
30 | chr12:11403800-11404400 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
31 | chr12:11405200-11407400 | Strong transcription | Primary T cells from cord blood | blood |
32 | chr12:11407400-11440200 | Weak transcription | Primary T cells from cord blood | blood |
33 | chr12:11418400-11418600 | Bivalent Enhancer | HUVEC | blood vessel |
34 | chr12:11418600-11419200 | Enhancers | HUVEC | blood vessel |
35 | chr12:11420200-11420400 | ZNF genes & repeats | Pancreas | Pancrea |
36 | chr12:11420400-11423000 | Weak transcription | Pancreas | Pancrea |
37 | chr12:11422400-11422600 | Bivalent Enhancer | Foreskin Melanocyte Primary Cells skin01 | Skin |
38 | chr12:11423000-11423200 | ZNF genes & repeats | Pancreas | Pancrea |
39 | chr12:11424400-11425000 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
40 | chr12:11425000-11432400 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
41 | chr12:11426200-11427000 | Enhancers | HMEC | breast |
42 | chr12:11429800-11433800 | Weak transcription | Liver | Liver |
43 | chr12:11430600-11433200 | Weak transcription | Left Ventricle | heart |
44 | chr12:11431000-11431200 | Active TSS | Adipose Nuclei | Adipose |
45 | chr12:11431000-11433200 | Weak transcription | Primary T cells fromperipheralblood | blood |
46 | chr12:11431200-11433400 | Weak transcription | Adipose Nuclei | Adipose |
47 | chr12:11432400-11433000 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
48 | chr12:11433400-11434000 | Enhancers | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
49 | chr12:11433400-11434200 | Strong transcription | Adipose Nuclei | Adipose |
50 | chr12:11433800-11434000 | ZNF genes & repeats | Liver | Liver |