Variant report

Variant	nsv1041278
Chromosome Location	chr9:92965701-93560454
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:3618)
CpG islands
(count:736)
Chromatin interactive
region (count:150)
LncRNA
region (count:34)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:3618 , 50 per page) page: 1 2 3 4 5 6 7 ... 73

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr9:93220829-93221088	HepG2	liver:	n/a	n/a
2	ARID3A	chr9:93319272-93319490	HepG2	liver:	n/a	n/a
3	ATF2	chr9:93555851-93556401	GM12878	blood:	n/a	n/a
4	ATF2	chr9:93558086-93558762	GM12878	blood:	n/a	n/a
5	ATF2	chr9:93049726-93050109	GM12878	blood:	n/a	n/a
6	ATF2	chr9:93550280-93550647	GM12878	blood:	n/a	n/a
7	ATF2	chr9:93558128-93558701	GM12878	blood:	n/a	n/a
8	ATF2	chr9:93532527-93532947	GM12878	blood:	n/a	n/a
9	ATF2	chr9:93555884-93556513	GM12878	blood:	n/a	n/a
10	ATF2	chr9:93550323-93550619	GM12878	blood:	n/a	n/a
11	ATF2	chr9:93532527-93533075	GM12878	blood:	n/a	n/a
12	ATF3	chr9:93518024-93518301	GM12878	blood:	n/a	n/a
13	BACH1	chr9:93088544-93088830	K562	blood:	n/a	n/a
14	BACH1	chr9:92989234-92989338	H1-hESC	embryonic stem cell:	n/a	n/a
15	BACH1	chr9:93477345-93477357	K562	blood:	n/a	n/a
16	BACH1	chr9:93404937-93405201	H1-hESC	embryonic stem cell:	n/a	n/a
17	BACH1	chr9:93088508-93088797	H1-hESC	embryonic stem cell:	n/a	n/a
18	BACH1	chr9:93195766-93196225	H1-hESC	embryonic stem cell:	n/a	n/a
19	BATF	chr9:93049762-93050054	GM12878	blood:	n/a	n/a
20	BATF	chr9:92989064-92989394	GM12878	blood:	n/a	n/a
21	BATF	chr9:93277191-93277466	GM12878	blood:	n/a	n/a
22	BATF	chr9:93550280-93550640	GM12878	blood:	n/a	chr9:93550390-93550399
23	BATF	chr9:93555938-93556401	GM12878	blood:	n/a	n/a
24	BATF	chr9:93558330-93558658	GM12878	blood:	n/a	n/a
25	BATF	chr9:93486508-93486776	GM12878	blood:	n/a	n/a
26	BATF	chr9:93525920-93526256	GM12878	blood:	n/a	n/a
27	BATF	chr9:93266772-93267124	GM12878	blood:	n/a	n/a
28	BATF	chr9:93558312-93558666	GM12878	blood:	n/a	n/a
29	BATF	chr9:93518120-93518393	GM12878	blood:	n/a	n/a
30	BATF	chr9:93532620-93532940	GM12878	blood:	n/a	chr9:93532837-93532846 chr9:93532702-93532713
31	BATF	chr9:93550664-93551183	GM12878	blood:	n/a	n/a
32	BATF	chr9:93038458-93038777	GM12878	blood:	n/a	n/a
33	BATF	chr9:93277829-93278161	GM12878	blood:	n/a	n/a
34	BATF	chr9:93049789-93050096	GM12878	blood:	n/a	n/a
35	BATF	chr9:93518052-93518358	GM12878	blood:	n/a	n/a
36	BATF	chr9:92989140-92989405	GM12878	blood:	n/a	n/a
37	BATF	chr9:93555879-93556434	GM12878	blood:	n/a	n/a
38	BATF	chr9:92999499-92999649	GM12878	blood:	n/a	n/a
39	BATF	chr9:93550365-93550612	GM12878	blood:	n/a	chr9:93550390-93550399
40	BATF	chr9:93038508-93038817	GM12878	blood:	n/a	n/a
41	BATF	chr9:93532486-93533004	GM12878	blood:	n/a	chr9:93532837-93532846 chr9:93532702-93532713
42	BCL11A	chr9:93536992-93537244	GM12878	blood:	n/a	n/a
43	BCL11A	chr9:93536865-93537286	GM12878	blood:	n/a	chr9:93536894-93536907
44	BCL11A	chr9:93550306-93550649	GM12878	blood:	n/a	n/a
45	BCL11A	chr9:93532591-93533005	GM12878	blood:	n/a	n/a
46	BCL11A	chr9:93556018-93556304	GM12878	blood:	n/a	n/a
47	BCL11A	chr9:93555930-93556381	GM12878	blood:	n/a	n/a
48	BCL3	chr9:93063601-93063866	GM12878	blood:	n/a	n/a
49	BCL3	chr9:93518037-93518382	A549	lung:	n/a	n/a
50	BCL3	chr9:92989044-92989494	A549	lung:	n/a	n/a

(count:736 , 50 per page) page: 1 2 3 4 5 6 7 ... 15

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr9:93377568-93377618	BE2_C	brain:	n/a
2	chr9:92982316-92982366	HUVEC	blood vessel:	n/a
3	chr9:93373496-93373546	NB4	blood:	n/a
4	chr9:93404977-93405027	HIPEpiC	eye:	n/a
5	chr9:93377568-93377618	BE2_C	brain:	n/a
6	chr9:92982316-92982366	HUVEC	blood vessel:	n/a
7	chr9:93373496-93373546	NB4	blood:	n/a
8	chr9:93404977-93405027	HIPEpiC	eye:	n/a
9	chr9:92982316-92982366	BE2_C	brain:	n/a
10	chr9:93377568-93377618	PFSK-1	brain:	n/a
11	chr9:93375779-93375829	GM12892	blood:	n/a
12	chr9:92981825-92981875	HPAEpiC	pulmonary alveolar:	n/a
13	chr9:93404977-93405027	HCF	heart:	n/a
14	chr9:93375779-93375829	HEK293	kidney:	embryo
15	chr9:93405134-93405184	GM06990	blood:	n/a
16	chr9:93375779-93375829	MCF-7	breast:	n/a
17	chr9:93523028-93523078	AG04449	skin:	fetal
18	chr9:93404977-93405027	HEEpiC	esophagus:	n/a
19	chr9:93523028-93523078	ECC-1	luminal epithelium:	n/a
20	chr9:93279614-93279664	PrEC	prostate:	n/a
21	chr9:93523028-93523078	HMEC	breast:	n/a
22	chr9:92981825-92981875	HRPEpiC	eye:	n/a
23	chr9:93377568-93377618	HPAEpiC	pulmonary alveolar:	n/a
24	chr9:92981825-92981875	SKMC	muscle:	n/a
25	chr9:92983726-92983776	HAEpiC	amniotic membrane:	n/a
26	chr9:93523028-93523078	HRCEpiC	kidney:	n/a
27	chr9:93377568-93377618	SK-N-MC	brain:	n/a
28	chr9:93404977-93405027	GM19239	blood:	n/a
29	chr9:92982316-92982366	AG04450	lung:	fetal
30	chr9:93205862-93205912	NHBE	bronchial:	n/a
31	chr9:92981825-92981875	HAEpiC	amniotic membrane:	n/a
32	chr9:92983726-92983776	PrEC	prostate:	n/a
33	chr9:93375779-93375829	HEEpiC	esophagus:	n/a
34	chr9:93523028-93523078	HEK293	kidney:	embryo
35	chr9:93405134-93405184	HCM	heart:	n/a
36	chr9:93375779-93375829	HMEC	breast:	n/a
37	chr9:93205862-93205912	HepG2	liver:	n/a
38	chr9:93205862-93205912	SK-N-SH_RA	brain:	n/a
39	chr9:93405134-93405184	A549	lung:	n/a
40	chr9:92983726-92983776	AG04449	skin:	fetal
41	chr9:93381712-93381762	HCM	heart:	n/a
42	chr9:93381712-93381762	AG04449	skin:	fetal
43	chr9:93375779-93375829	HNPCEpiC	eye:	n/a
44	chr9:93377568-93377618	SK-N-SH_RA	brain:	n/a
45	chr9:93279614-93279664	AG10803	skin:	n/a
46	chr9:93373496-93373546	HEEpiC	esophagus:	n/a
47	chr9:93405134-93405184	HNPCEpiC	eye:	n/a
48	chr9:92982316-92982366	HepG2	liver:	n/a
49	chr9:93373496-93373546	AG10803	skin:	n/a
50	chr9:93404977-93405027	HRE	kidney:	n/a

(count:150 , 50 per page) page: 1 2 3

No.	Distal block	Cell Line	Cell type
1	chr9:93548131..93550213-chr9:93558299..93561058,2	MCF-7	breast:
2	chr9:93331305..93333153-chr9:93360734..93362248,2	MCF-7	breast:
3	chr9:93169990..93172318-chr9:93276774..93279418,2	MCF-7	breast:
4	chr9:93011546..93013972-chr9:93052355..93054328,2	MCF-7	breast:
5	chr9:93101009..93103302-chr9:93104269..93106230,2	MCF-7	breast:
6	chr9:92903793..92904418-chr9:92981541..92982063,2	MCF-7	breast:
7	chr9:93553805..93555797-chr9:93557563..93559338,2	MCF-7	breast:
8	chr9:92904573..92905325-chr9:92981766..92982487,4	MCF-7	breast:
9	chr9:93484649..93486514-chr9:93487785..93489688,2	K562	blood:
10	chr9:93318353..93320254-chr9:93329682..93331358,2	MCF-7	breast:
11	chr9:93211161..93212918-chr9:93221258..93222920,2	MCF-7	breast:
12	chr9:93241440..93243163-chr9:93250628..93252389,2	MCF-7	breast:
13	chr9:93263372..93266232-chr9:93320840..93322569,2	MCF-7	breast:
14	chr9:93274702..93277219-chr9:93278665..93280297,2	MCF-7	breast:
15	chr9:93338251..93341231-chr9:93341988..93344366,3	K562	blood:
16	chr9:93553805..93555797-chr9:93557563..93559338,2	MCF-7	breast:
17	chr17:41380195..41382142-chr9:93202874..93204394,2	K562	blood:
18	chr9:93397196..93399394-chr9:93400643..93403183,2	MCF-7	breast:
19	chr9:93556987..93560757-chr9:93560998..93566241,6	MCF-7	breast:
20	chr9:93463508..93465542-chr9:93470108..93472362,2	MCF-7	breast:
21	chr9:93011459..93013580-chr9:93031679..93033930,2	MCF-7	breast:
22	chr17:41464874..41468297-chr9:93204374..93205874,3	K562	blood:
23	chr9:93181865..93183574-chr9:93187872..93189669,2	MCF-7	breast:
24	chr9:93181865..93183574-chr9:93187872..93189669,2	MCF-7	breast:
25	chr9:93167062..93168707-chr9:93170210..93172372,2	MCF-7	breast:
26	chr9:93375433..93377153-chr9:93379481..93381219,2	MCF-7	breast:
27	chr9:93211161..93212918-chr9:93221258..93222920,2	MCF-7	breast:
28	chr9:93321655..93323736-chr9:93327516..93329786,2	MCF-7	breast:
29	chr9:93080535..93081683-chr9:93405150..93405933,3	MCF-7	breast:
30	chr9:93011459..93013580-chr9:93031679..93033930,2	MCF-7	breast:
31	chr9:93067169..93069123-chr9:93074585..93076643,2	MCF-7	breast:
32	chr9:93212462..93214630-chr9:93238958..93240612,2	MCF-7	breast:
33	chr9:93080669..93081254-chr9:93407694..93408434,5	MCF-7	breast:
34	chr9:93330757..93332440-chr9:93336528..93338799,2	MCF-7	breast:
35	chr9:93488467..93489082-chr9:93633187..93633730,2	MCF-7	breast:
36	chr9:93465686..93467916-chr9:93473022..93475228,2	K562	blood:
37	chr9:93531677..93533419-chr9:93534345..93537037,2	MCF-7	breast:
38	chr9:93005901..93009302-chr9:93010303..93013281,3	MCF-7	breast:
39	chr9:93298847..93301610-chr9:93304161..93305882,2	MCF-7	breast:
40	chr1:45185888..45187495-chr9:93118658..93120159,2	K562	blood:
41	chr9:93331305..93333153-chr9:93360734..93362248,2	MCF-7	breast:
42	chr9:93318353..93320254-chr9:93329682..93331358,2	MCF-7	breast:
43	chr9:93193019..93195566-chr9:93205294..93207843,2	K562	blood:
44	chr9:93536801..93537568-chr9:93617128..93617717,2	MCF-7	breast:
45	chr9:93226746..93228551-chr9:93229306..93230894,2	MCF-7	breast:
46	chr7:129799552..129800410-chr9:93407923..93408573,2	MCF-7	breast:
47	chr9:93408648..93410891-chr9:93417472..93420356,2	MCF-7	breast:
48	chr9:93204645..93206858-chr9:93212032..93213891,2	MCF-7	breast:
49	chr9:93212462..93214630-chr9:93238958..93240612,2	MCF-7	breast:
50	chr17:59487466..59488988-chr9:93218096..93219987,2	MCF-7	breast:

(count:34 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-DIRAS2-2	chr9:93195713-93195779	NONHSAT133001
2	lnc-SYK-11	chr9:92964974-92967679	NONHSAT132996
3	lnc-DIRAS2-10	chr9:93028093-93029379	NONHSAT132997
4	lnc-DIRAS2-1	chr9:93323311-93323434	ENSG00000229613
5	lnc-DIRAS2-1	chr9:93269540-93269701	XLOC_007770
6	lnc-DIRAS2-10	chr9:93034039-93034046	NONHSAT132997
7	lnc-DIRAS2-8	chr9:93217402-93217764	NONHSAT133003
8	lnc-DIRAS2-1	chr9:93229098-93229227	XLOC_007770
9	lnc-DIRAS2-8	chr9:93222504-93222652	NONHSAT133003
10	lnc-DIRAS2-1	chr9:93225453-93226084	XLOC_007770
11	lnc-DIRAS2-1	chr9:93225806-93226084	XLOC_007770
12	lnc-DIRAS2-1	chr9:93344810-93344976	ENSG00000229613
13	lnc-DIRAS2-2	chr9:93147298-93147865	XLOC_007769
14	lnc-SYK-8	chr9:93228341-93228499	NONHSAT133007
15	lnc-SYK-8	chr9:93228933-93229247	NONHSAT133007
16	lnc-DIRAS2-1	chr9:93268005-93268062	XLOC_007770
17	lnc-DIRAS2-2	chr9:93147298-93147564	XLOC_007769
18	lnc-DIRAS2-2	chr9:93145802-93146003	NR_109795
19	lnc-DIRAS2-1	chr9:93263921-93264066	XLOC_007770
20	lnc-DIRAS2-6	chr9:93504808-93505662	NONHSAT133099
21	lnc-SYK-3	chr9:93372114-93375848	ENSG00000249765
22	lnc-DIRAS2-1	chr9:93263655-93264066	XLOC_007770
23	lnc-DIRAS2-2	chr9:93145978-93146003	XLOC_007769
24	lnc-DIRAS2-1	chr9:93269540-93269701	XLOC_007770
25	lnc-DIRAS2-2	chr9:93195713-93195787	XLOC_007769
26	lnc-DIRAS2-5	chr9:93289135-93289399	l_3808_chr9:93286385-93289333_testes
27	lnc-DIRAS2-2	chr9:93063178-93063935	NR_109795
28	lnc-DIRAS2-2	chr9:93145892-93146003	XLOC_007769
29	lnc-SYK-9	chr9:93093837-93093904	NONHSAT133000
30	lnc-DIRAS2-5	chr9:93286386-93286818	l_3808_chr9:93286385-93289333_testes
31	lnc-SYK-9	chr9:93087618-93087758	NONHSAT133000
32	lnc-DIRAS2-2	chr9:93195713-93195771	NR_109795
33	lnc-DIRAS2-1	chr9:93268005-93268062	XLOC_007770
34	lnc-DIRAS2-2	chr9:93145799-93146003	NONHSAT133001

No data

Variant related genes	Relation type
ENSG00000231107	TF binding region
DIRAS2	TF binding region
OR7E31P	TF binding region
ENSG00000229613	TF binding region
OR7E108P	TF binding region
SYK	TF binding region
OR7E109P	TF binding region
OR7E116P	TF binding region
ENSG00000231107	CpG island
DIRAS2	CpG island
OR7E31P	CpG island
ENSG00000229613	CpG island
OR7E108P	CpG island
SYK	CpG island
OR7E109P	CpG island
OR7E116P	CpG island
ENSG00000062716	chromatin interactions
ENSG00000200169	chromatin interactions
ENSG00000236383	chromatin interactions
ENSG00000229613	chromatin interactions
ENSG00000124588	chromatin interactions
ENSG00000188825	chromatin interactions
ENSG00000231107	chromatin interactions
ENSG00000165023	chromatin interactions
ENSG00000165025	chromatin interactions
ENSG00000267280	chromatin interactions
LYN	miRNA target sites
PRDM1	miRNA target sites

Extended variants
information (count: 17511 )
Associated
traits (count: 77 )

Variant overlapped rSNPs/rCNVs (count:17511 , 50 per page) page: 1 2 3 4 5 6 7 ... 351

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs530616485	chr9:92965706-92965707	Weak transcription Enhancers	lncRNA	n/a	Overlapped CNVs	n/a
2	rs57450132	chr9:92965896-92965897	Enhancers Weak transcription	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
3	rs558195540	chr9:92965943-92965944	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
4	rs201585686	chr9:92965955-92965956	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
5	rs567456385	chr9:92965956-92965957	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
6	rs149808912	chr9:92965969-92965970	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
7	rs529951025	chr9:92965987-92965988	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
8	rs61089572	chr9:92965993-92965994	Enhancers Weak transcription	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs567183275	chr9:92966011-92966012	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
10	rs538769794	chr9:92966040-92966041	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
11	rs77668532	chr9:92966058-92966059	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
12	rs558685463	chr9:92966098-92966099	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
13	rs145931610	chr9:92966162-92966163	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
14	rs377079905	chr9:92966237-92966238	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
15	rs200189060	chr9:92966248-92966249	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
16	rs72439457	chr9:92966249-92966250	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
17	rs377175056	chr9:92966252-92966253	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
18	rs59971122	chr9:92966271-92966272	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
19	rs57654686	chr9:92966279-92966280	Enhancers Weak transcription	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
20	rs191025305	chr9:92966305-92966306	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
21	rs141835101	chr9:92966328-92966329	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
22	rs552925220	chr9:92966353-92966354	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
23	rs150782021	chr9:92966387-92966388	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
24	rs635283	chr9:92966417-92966418	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
25	rs635260	chr9:92966429-92966430	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
26	rs375442400	chr9:92966433-92966434	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
27	rs569549113	chr9:92966436-92966437	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
28	rs635249	chr9:92966441-92966442	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
29	rs374578	chr9:92966471-92966472	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
30	rs139145286	chr9:92966473-92966474	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
31	rs183542257	chr9:92966478-92966479	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
32	rs114833091	chr9:92966495-92966496	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
33	rs187444329	chr9:92966525-92966526	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
34	rs149918198	chr9:92966527-92966528	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
35	rs73490501	chr9:92966529-92966530	Enhancers Weak transcription	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
36	rs560239978	chr9:92966553-92966554	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
37	rs532138850	chr9:92966562-92966563	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
38	rs144289397	chr9:92966568-92966569	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
39	rs568979319	chr9:92966569-92966570	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
40	rs376394097	chr9:92966670-92966671	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
41	rs7019658	chr9:92966675-92966676	Enhancers Weak transcription	lncRNA	n/a	LD-proxies of rSNP Overlapped rCNV	n/a
42	rs140777237	chr9:92966723-92966724	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
43	rs574362509	chr9:92966724-92966725	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
44	rs377085688	chr9:92966728-92966729	Enhancers Weak transcription	lncRNA	n/a	Overlapped CNVs	n/a
45	rs567832564	chr9:92966843-92966844	Enhancers Bivalent Enhancer	lncRNA	n/a	Overlapped CNVs	n/a
46	rs543361081	chr9:92966860-92966861	Enhancers Bivalent Enhancer	lncRNA	n/a	Overlapped CNVs	n/a
47	rs191966160	chr9:92966880-92966881	Enhancers Bivalent Enhancer	lncRNA	n/a	Overlapped CNVs	n/a
48	rs77537856	chr9:92966881-92966882	Enhancers Bivalent Enhancer	lncRNA	n/a	Overlapped CNVs	n/a
49	rs114818177	chr9:92966903-92966904	Enhancers Bivalent Enhancer	lncRNA	n/a	Overlapped CNVs	n/a
50	rs538656209	chr9:92966904-92966905	Enhancers Bivalent Enhancer	lncRNA	n/a	Overlapped CNVs	n/a

Variant related diseases (count:77)

Disease	PMID	Source
Chordoma	18071362	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Chordoma	21602918	CNVD
Renal cell carcinoma	18592004	CNVD
Developmental delay	19490664	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Pleomorphic xanthoastrocytoma	20730472	CNVD
Medulloblastoma	21979893	CNVD
microdeletion syndrome	16199537	CNVD
Ovarian cancer	21720365	CNVD
Non-syndromic sensorineural hearing loss	21030649	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Cancer	20164919	CNVD
Urothelial carcinoma	21177765	CNVD
Renal cell carcinoma	21668985	CNVD
Autism	22495311	CNVD
Melanoma	18172304	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Acute lymphoblastic leukemia	20435627	CNVD
Cancer	16751803	CNVD
Myelofibrosis	22110671	CNVD
lymphocytic leukemia	21291569	CNVD
Leukemia	17361228	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Glioblastoma	16823260	CNVD
Leukemia	18688285	CNVD
Non-small cell lung cancer	21044232	CNVD
Brain cancer	20823417	CNVD
Acute lymphoblastic leukemia	21390130	CNVD
Astrocytoma	17387387	CNVD
Glioblastoma multiforme	21080181	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Renal cell carcinoma	19461508	CNVD
Neuroblastoma	18923191	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Heart disease	21282601	CNVD
Acute promyelocytic leukemia	19109227	CNVD
Lung cancer	18438408	CNVD
Hodgkin''s lymphoma	17606441	CNVD
Acute myeloid leukemia	21251322	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Breast cancer	17603634	CNVD
Acute myeloid leukemia	20729466	CNVD
Oral cancer	21386901	CNVD
Bipolar disorder	18458673	CNVD
Invasive pancreatic ductal carcinoma	16982739	CNVD
T-cell acute lymphoblastic leukemia	18185524	CNVD
Wilms tumour	21544195	CNVD
Prostate cancer	18632612	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Gastric cancer	17908304	CNVD
Malignant peripheral nerve sheath tumor	18522746	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Malignant fibrous histiocytomas	21085701	CNVD
Biliary cancer	19435499	CNVD
small cell lung cancer	20016488	CNVD
Intracranial aneurysm	16715129	CNVD
Cardiac fibroma	18329553	CNVD
Mental retardation	21693067	CNVD
Glioma	17123091	CNVD
Mantle cell lymphoma	19029149	CNVD
Breast cancer	17133270	CNVD
Pancreatic cancer	17952125	CNVD
Breast cancer	22522925	CNVD
Basal cell nevus syndrome	21572526	CNVD
Mental retardation	19951919	CNVD
Retinoblastoma	22278416	CNVD
9q22.3 microdeletion syndrome	22283845	CNVD
Acute lymphoblastic leukemia	21980252	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD
Non-syndromic sensorineural hearing loss	21293372	CNVD
Cancer	17440070	CNVD
Schizophrenia	23813976	CNVD
overgrowth syndrome	16570072	CNVD

Chromatin state (count:1865 , 50 per page) page: 1 2 3 4 5 6 7 ... 38

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:92963800-92965800	Weak transcription	Primary B cells from cord blood	blood
2	chr9:92964200-92966800	Weak transcription	Fetal Intestine Large	intestine
3	chr9:92965000-92967600	Enhancers	Primary B cells from peripheral blood	blood
4	chr9:92965800-92967400	Enhancers	Primary B cells from cord blood	blood
5	chr9:92966800-92967200	Bivalent Enhancer	Duodenum Mucosa	Duodenum
6	chr9:92966800-92967200	Enhancers	Fetal Intestine Large	intestine
7	chr9:92974200-92975200	Enhancers	Primary B cells from peripheral blood	blood
8	chr9:92974200-92976400	Enhancers	Primary B cells from cord blood	blood
9	chr9:92974400-92976200	Enhancers	Primary monocytes fromperipheralblood	blood
10	chr9:92975000-92975200	Enhancers	Monocytes-CD14+_RO01746	blood
11	chr9:92975200-92975600	Flanking Active TSS	Primary B cells from peripheral blood	blood
12	chr9:92975200-92975600	Active TSS	Adipose Nuclei	Adipose
13	chr9:92975200-92975600	Enhancers	Fetal Muscle Trunk	muscle
14	chr9:92975200-92975600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
15	chr9:92975400-92975600	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr9:92975600-92976000	Enhancers	Monocytes-CD14+_RO01746	blood
17	chr9:92975600-92976400	Enhancers	Primary B cells from peripheral blood	blood
18	chr9:92976400-92981600	Weak transcription	Primary B cells from peripheral blood	blood
19	chr9:92981600-92981800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr9:92981600-92982000	Active TSS	Duodenum Mucosa	Duodenum
21	chr9:92981600-92982000	Active TSS	Rectal Mucosa Donor 29	rectum
22	chr9:92981600-92982200	Active TSS	ES-I3 Cell Line	embryonic stem cell
23	chr9:92981600-92982200	Enhancers	Primary B cells from peripheral blood	blood
24	chr9:92981600-92982400	Active TSS	HUES48 Cell Line	embryonic stem cell
25	chr9:92981600-92982400	Active TSS	HUES6 Cell Line	embryonic stem cell
26	chr9:92981600-92982400	Active TSS	iPS-15b Cell Line	embryonic stem cell
27	chr9:92981600-92982400	Active TSS	iPS-18 Cell Line	embryonic stem cell
28	chr9:92981600-92982400	Active TSS	iPS-20b Cell Line	embryonic stem cell
29	chr9:92981600-92982400	Active TSS	Primary hematopoietic stem cells	blood
30	chr9:92981600-92982600	Active TSS	H1 Cell Line	embryonic stem cell
31	chr9:92981600-92982600	Active TSS	HUES64 Cell Line	embryonic stem cell
32	chr9:92981800-92982000	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
33	chr9:92981800-92982000	Bivalent Enhancer	Fetal Muscle Leg	muscle
34	chr9:92981800-92982200	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
35	chr9:92981800-92982200	Enhancers	Primary monocytes fromperipheralblood	blood
36	chr9:92981800-92982200	Enhancers	Primary neutrophils fromperipheralblood	blood
37	chr9:92981800-92982200	Bivalent Enhancer	Primary T cells fromperipheralblood	blood
38	chr9:92981800-92982200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
39	chr9:92981800-92982200	Bivalent Enhancer	Fetal Muscle Trunk	muscle
40	chr9:92981800-92982200	Bivalent Enhancer	A549	lung
41	chr9:92981800-92982400	Bivalent/Poised TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
42	chr9:92981800-92982400	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
43	chr9:92981800-92982400	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
44	chr9:92981800-92982400	Enhancers	Rectal Mucosa Donor 31	rectum
45	chr9:92982000-92982200	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
46	chr9:92982000-92982200	Bivalent Enhancer	Fetal Adrenal Gland	Adrenal Gland
47	chr9:92982000-92982200	Bivalent Enhancer	Placenta	Placenta
48	chr9:92982000-92982200	Enhancers	Rectal Mucosa Donor 29	rectum
49	chr9:92982000-92982400	Active TSS	ES-WA7 Cell Line	embryonic stem cell
50	chr9:92982000-92982400	Active TSS	H9 Cell Line	embryonic stem cell

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links