Variant report

Variant	nsv1041861
Chromosome Location	chr15:42016097-42062287
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:140)
CpG islands
(count:183)
Chromatin interactive
region (count:31)
LncRNA
region (count:1)
Mature miRNA
region (count: 0)
miRNA target
sites (count:1)

(count:140 , 50 per page) page: 1 2 3

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:42022846-42023059	K562	blood:	n/a	n/a
2	ATF1	chr15:42022883-42023145	K562	blood:	n/a	n/a
3	BACH1	chr15:42025720-42025784	K562	blood:	n/a	n/a
4	BCL3	chr15:42052435-42052812	GM12878	blood:	n/a	n/a
5	BCL3	chr15:42052488-42052801	GM12878	blood:	n/a	n/a
6	BRCA1	chr15:42020879-42020886	Hela-S3	cervix:	n/a	n/a
7	CEBPB	chr15:42041780-42042039	K562	blood:	n/a	n/a
8	CEBPB	chr15:42018823-42018996	H1-hESC	embryonic stem cell:	n/a	chr15:42018877-42018888
9	CEBPB	chr15:42039062-42039376	A549	lung:	n/a	n/a
10	CEBPB	chr15:42018772-42019037	K562	blood:	n/a	chr15:42018877-42018888
11	CEBPB	chr15:42041787-42042091	IMR90	lung:	n/a	n/a
12	CEBPB	chr15:42039095-42039357	K562	blood:	n/a	n/a
13	CEBPB	chr15:42018839-42018924	HepG2	liver:	n/a	chr15:42018877-42018888
14	CEBPB	chr15:42041788-42041975	A549	lung:	n/a	n/a
15	CEBPB	chr15:42039058-42039391	HepG2	liver:	n/a	n/a
16	CEBPB	chr15:42039188-42039290	H1-hESC	embryonic stem cell:	n/a	n/a
17	CEBPB	chr15:42022791-42023141	K562	blood:	n/a	chr15:42022944-42022955 chr15:42022956-42022968
18	CEBPB	chr15:42018827-42019014	IMR90	lung:	n/a	chr15:42018877-42018888
19	CEBPB	chr15:42039027-42039417	Hela-S3	cervix:	n/a	n/a
20	CEBPB	chr15:42039047-42039408	IMR90	lung:	n/a	n/a
21	CTCF	chr15:42045458-42045531	Lung_OC	lung:	n/a	n/a
22	CTCF	chr15:42059720-42059870	Caco-2	colon:	n/a	n/a
23	CTCF	chr15:42039789-42039816	GM10248	blood:	n/a	n/a
24	CUX1	chr15:42050211-42050293	GM12878	blood:	n/a	n/a
25	CUX1	chr15:42023029-42023217	K562	blood:	n/a	n/a
26	E2F4	chr15:42041453-42041538	MCF10A-Er-Src	breast:	n/a	n/a
27	E2F4	chr15:42046742-42046845	MCF10A-Er-Src	breast:	n/a	n/a
28	EP300	chr15:42022983-42023233	K562	blood:	n/a	n/a
29	EP300	chr15:42022829-42023169	K562	blood:	n/a	chr15:42022918-42022927
30	FAM48A	chr15:42028609-42028704	GM12878	blood:	n/a	n/a
31	FOS	chr15:42039027-42039336	MCF10A-Er-Src	breast:	n/a	n/a
32	FOS	chr15:42039008-42039348	MCF10A-Er-Src	breast:	n/a	n/a
33	FOS	chr15:42039028-42039336	MCF10A-Er-Src	breast:	n/a	n/a
34	FOS	chr15:42039046-42039337	MCF10A-Er-Src	breast:	n/a	n/a
35	FOSL2	chr15:42026261-42026774	SK-N-SH	brain:	n/a	chr15:42026501-42026511 chr15:42026497-42026507 chr15:42026501-42026511 chr15:42026497-42026507 chr15:42026498-42026506 chr15:42026498-42026505 chr15:42026498-42026506 chr15:42026497-42026507 chr15:42026696-42026708 chr15:42026497-42026507 chr15:42026491-42026503
36	GATA2	chr15:42038961-42039322	HUVEC	blood vessel:	n/a	chr15:42039159-42039170 chr15:42039149-42039163
37	GATA3	chr15:42044987-42045402	MCF-7	breast:	n/a	n/a
38	GATA3	chr15:42038776-42039481	SK-N-SH	brain:	n/a	chr15:42039159-42039170
39	GATA3	chr15:42039025-42039488	MCF-7	breast:	n/a	chr15:42039159-42039170
40	GATA3	chr15:42038746-42039473	SK-N-SH	brain:	n/a	chr15:42039159-42039170
41	GATA3	chr15:42017141-42017426	SH-SY5Y	brain:	n/a	n/a
42	JUND	chr15:42026224-42026764	SK-N-SH	brain:	n/a	chr15:42026501-42026511 chr15:42026497-42026507 chr15:42026501-42026511 chr15:42026497-42026507 chr15:42026498-42026506 chr15:42026498-42026505 chr15:42026498-42026506 chr15:42026497-42026507 chr15:42026696-42026708 chr15:42026497-42026507 chr15:42026491-42026503
43	KAP1	chr15:42049875-42050082	K562	blood:	n/a	n/a
44	MAFF	chr15:42031685-42031688	K562	blood:	n/a	n/a
45	MAFF	chr15:42019407-42019431	K562	blood:	n/a	n/a
46	MAFF	chr15:42024704-42025047	K562	blood:	n/a	n/a
47	MAFF	chr15:42024691-42025076	HepG2	liver:	n/a	n/a
48	MAFF	chr15:42061000-42061178	HepG2	liver:	n/a	n/a
49	MAFK	chr15:42060970-42061139	HepG2	liver:	n/a	n/a
50	MAFK	chr15:42031599-42031928	HepG2	liver:	n/a	chr15:42031735-42031750 chr15:42031735-42031751 chr15:42031735-42031746

(count:183 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:42061865-42061915	HL-60	blood:	n/a
2	chr15:42052632-42052682	ECC-1	luminal epithelium:	n/a
3	chr15:42052629-42052679	A549	lung:	n/a
4	chr15:42052632-42052682	AG10803	skin:	n/a
5	chr15:42061865-42061915	LNCaP	prostate:	n/a
6	chr15:42052632-42052682	HEK293	kidney:	embryo
7	chr15:42052629-42052679	HRE	kidney:	n/a
8	chr15:42052632-42052682	NHBE	bronchial:	n/a
9	chr15:42052632-42052682	HRPEpiC	eye:	n/a
10	chr15:42052629-42052679	PrEC	prostate:	n/a
11	chr15:42052632-42052682	GM19239	blood:	n/a
12	chr15:42052632-42052682	GM12878	blood:	n/a
13	chr15:42061865-42061915	MCF10A-Er-Src	breast:	n/a
14	chr15:42061865-42061915	HEEpiC	esophagus:	n/a
15	chr15:42061865-42061915	HRPEpiC	eye:	n/a
16	chr15:42052632-42052682	SK-N-SH	brain:	n/a
17	chr15:42052629-42052679	LNCaP	prostate:	n/a
18	chr15:42061865-42061915	SKMC	muscle:	n/a
19	chr15:42061865-42061915	CMK	blood:	n/a
20	chr15:42061865-42061915	AG04450	lung:	fetal
21	chr15:42052629-42052679	NHBE	bronchial:	n/a
22	chr15:42052629-42052679	HUVEC	blood vessel:	n/a
23	chr15:42061865-42061915	AoSMC	blood vessel:	n/a
24	chr15:42052629-42052679	GM12878	blood:	n/a
25	chr15:42052632-42052682	K562	blood:	n/a
26	chr15:42052629-42052679	PANC-1	pancreas:	n/a
27	chr15:42061865-42061915	BJ	skin:	n/a
28	chr15:42052632-42052682	Hela-S3	cervix:	n/a
29	chr15:42052629-42052679	GM12891	blood:	n/a
30	chr15:42052629-42052679	NT2-D1	testis:	n/a
31	chr15:42052629-42052679	MCF-7	breast:	n/a
32	chr15:42052629-42052679	AG09309	skin:	n/a
33	chr15:42052629-42052679	SAEC	small airway:	n/a
34	chr15:42052629-42052679	HEK293	kidney:	embryo
35	chr15:42052632-42052682	SAEC	small airway:	n/a
36	chr15:42061865-42061915	HRE	kidney:	n/a
37	chr15:42052632-42052682	GM12892	blood:	n/a
38	chr15:42052632-42052682	HRCEpiC	kidney:	n/a
39	chr15:42052629-42052679	U87	brain:	n/a
40	chr15:42052632-42052682	AG09319	gingival:	n/a
41	chr15:42061865-42061915	NH-A	brain:	n/a
42	chr15:42052632-42052682	AG04449	skin:	fetal
43	chr15:42052632-42052682	BJ	skin:	n/a
44	chr15:42061865-42061915	HAEpiC	amniotic membrane:	n/a
45	chr15:42052629-42052679	GM12892	blood:	n/a
46	chr15:42052632-42052682	AG09309	skin:	n/a
47	chr15:42052632-42052682	GM12891	blood:	n/a
48	chr15:42052632-42052682	CMK	blood:	n/a
49	chr15:42061865-42061915	PrEC	prostate:	n/a
50	chr15:42052632-42052682	HPAEpiC	pulmonary alveolar:	n/a

(count:31 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr15:42057695..42060006-chr15:42069588..42072427,2	K562	blood:
2	chr15:42043169..42045092-chr15:42049532..42051518,2	MCF-7	breast:
3	chr15:42043169..42045092-chr15:42049532..42051518,2	MCF-7	breast:
4	chr15:42057036..42058536-chr15:42061247..42063418,2	MCF-7	breast:
5	chr15:42028222..42030756-chr15:42044005..42046072,2	K562	blood:
6	chr15:42039177..42040902-chr15:42043568..42045872,2	MCF-7	breast:
7	chr15:42018096..42020182-chr15:42050911..42053494,2	K562	blood:
8	chr15:42034159..42036679-chr15:42048298..42050430,2	K562	blood:
9	chr15:42041841..42044077-chr15:42045967..42047583,2	K562	blood:
10	chr15:42041841..42044077-chr15:42045967..42047583,2	K562	blood:
11	chr15:42035386..42037537-chr15:42041123..42043627,2	MCF-7	breast:
12	chr15:42039177..42040902-chr15:42043568..42045872,2	MCF-7	breast:
13	chr15:42055979..42058017-chr15:42060516..42063137,2	K562	blood:
14	chr15:42019750..42022278-chr15:42036338..42038977,2	K562	blood:
15	chr15:42034159..42036679-chr15:42048298..42050430,2	K562	blood:
16	chr15:42030668..42033706-chr15:42033784..42035660,3	MCF-7	breast:
17	chr15:42030668..42033706-chr15:42033784..42035660,3	MCF-7	breast:
18	chr15:42057536..42062634-chr15:42063486..42067728,8	K562	blood:
19	chr15:42058854..42060510-chr15:42065051..42067133,2	MCF-7	breast:
20	chr15:42019750..42022278-chr15:42036338..42038977,2	K562	blood:
21	chr15:42057036..42058536-chr15:42061247..42063418,2	MCF-7	breast:
22	chr15:42024047..42026644-chr15:42028448..42031222,2	K562	blood:
23	chr15:42028222..42030756-chr15:42044005..42046072,2	K562	blood:
24	chr15:42024047..42026644-chr15:42028448..42031222,2	K562	blood:
25	chr15:42040960..42042477-chr15:42049684..42052512,2	MCF-7	breast:
26	chr15:42055979..42058017-chr15:42060516..42063137,2	K562	blood:
27	chr15:42035386..42037537-chr15:42041123..42043627,2	MCF-7	breast:
28	chr15:42028588..42031786-chr15:42034789..42036907,3	K562	blood:
29	chr15:42049130..42051110-chr15:42082054..42084370,2	MCF-7	breast:
30	chr15:42028588..42031786-chr15:42034789..42036907,3	K562	blood:
31	chr15:42061280..42063508-chr15:42070993..42072761,2	K562	blood:

(count:1 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-SPTBN5-2	chr15:42062138-42063155	ENSG00000246549

No data

(count:1 , 50 per page) page: 1

No.	miRNA target gene	miRNA name	Chromosome Location	mirBase accession
1	MGA	hsa-miR-335-5p	chr15:42061114-42061138

Variant related genes	Relation type
MGA	TF binding region
MAPKBP1	TF binding region
MGA	CpG island
MAPKBP1	CpG island
ENSG00000137802	chromatin interactions
ENSG00000260814	chromatin interactions
ENSG00000174197	chromatin interactions
LRRC59	miRNA target sites

Extended variants
information (count: 1749 )
Associated
traits (count: 68 )

Variant overlapped rSNPs/rCNVs (count:1749 , 50 per page) page: 1 2 3 4 5 6 7 ... 35

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs567081569	chr15:42016148-42016149	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
2	rs199767329	chr15:42016155-42016156	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
3	rs186171871	chr15:42016158-42016159	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
4	rs551147503	chr15:42016160-42016161	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
5	rs563902563	chr15:42016162-42016163	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
6	rs552889471	chr15:42016164-42016165	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
7	rs367651276	chr15:42016175-42016176	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
8	rs79177668	chr15:42016176-42016177	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
9	rs571126572	chr15:42016180-42016181	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
10	rs146695574	chr15:42016181-42016182	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
11	rs557026955	chr15:42016203-42016204	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
12	rs534683133	chr15:42016233-42016234	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
13	rs567289276	chr15:42016242-42016243	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
14	rs140091878	chr15:42016294-42016295	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
15	rs574312637	chr15:42016295-42016296	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
16	rs149889586	chr15:42016304-42016305	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
17	rs145077829	chr15:42016315-42016316	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
18	rs545729918	chr15:42016464-42016465	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
19	rs559164366	chr15:42016465-42016466	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
20	rs538612942	chr15:42016503-42016504	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
21	rs553073339	chr15:42016521-42016522	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
22	rs575914050	chr15:42016545-42016546	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
23	rs544341338	chr15:42016546-42016547	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
24	rs552217880	chr15:42016649-42016650	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
25	rs377295324	chr15:42016735-42016736	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
26	rs561426661	chr15:42016778-42016779	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
27	rs191683997	chr15:42016849-42016850	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
28	rs540600936	chr15:42016851-42016852	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
29	rs373962615	chr15:42016882-42016883	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
30	rs560150299	chr15:42017005-42017006	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
31	rs528336692	chr15:42017026-42017027	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
32	rs551264552	chr15:42017045-42017046	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
33	rs368681351	chr15:42017063-42017064	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
34	rs149119944	chr15:42017080-42017081	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
35	rs530722289	chr15:42017083-42017084	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
36	rs550549145	chr15:42017150-42017151	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
37	rs567330007	chr15:42017184-42017185	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
38	rs535995882	chr15:42017327-42017328	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
39	rs371788351	chr15:42017340-42017341	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
40	rs568948640	chr15:42017345-42017346	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
41	rs146207438	chr15:42017354-42017355	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
42	rs574697848	chr15:42017377-42017378	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
43	rs62002071	chr15:42017443-42017444	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
44	rs542003430	chr15:42017458-42017459	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
45	rs576050355	chr15:42017478-42017479	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
46	rs544790802	chr15:42017515-42017516	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
47	rs2250964	chr15:42017542-42017543	Weak transcription Strong transcription	n/a	n/a	LD-proxies of rSNP Overlapped rCNV	mRNA abundance
48	rs574860810	chr15:42017544-42017545	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
49	rs540387203	chr15:42017575-42017576	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a
50	rs141344476	chr15:42017713-42017714	Weak transcription Strong transcription	n/a	n/a	Overlapped CNVs	n/a

Variant related diseases (count:68)

Disease	PMID	Source
HDAC8	0	CNVD
NIPBL	0	CNVD
RAD21	0	CNVD
SMC1A	0	CNVD
SMC3	0	CNVD
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Angelman syndrome	16183798	CNVD
Acute lymphoblastic leukemia	20067559	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21785460	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Ovarian cancer	22174824	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Oral squamous cell carcinoma	17134496	CNVD
Basal cell lymphoma	17053054	CNVD
Cancer	20164920	CNVD
Hodgkin''s lymphoma	18641027	CNVD
Cancer	21129771	CNVD
Papillary thyroid carcinoma	22161024	CNVD
Splenic marginal zone lymphoma	21957467	CNVD
Breast cancer	21045282	CNVD
Breast cancer	22032731	CNVD
low-grade B-cell lymphoma tumor	18367492	CNVD
Gastrointestinal stromal cancer	20877625	CNVD
Multiple myeloma	16616336	CNVD
Renal cell carcinoma	18765545	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Myelofibrosis	22110671	CNVD
Maculopathy	20981449	CNVD
Gastric adenocarcinoma	19115996	CNVD
Pancreatic cancer	17952125	CNVD

Chromatin state (count:1426 , 50 per page) page: 1 2 3 4 5 6 7 ... 29

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:41972400-42065200	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
2	chr15:41984200-42034800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr15:41989000-42041600	Weak transcription	Fetal Brain Male	brain
4	chr15:41995400-42023800	Weak transcription	Pancreatic Islets	Pancreatic Islet
5	chr15:41996200-42034800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
6	chr15:41999800-42018400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
7	chr15:42002000-42021400	Weak transcription	Esophagus	oesophagus
8	chr15:42002200-42028400	Weak transcription	Pancreas	Pancrea
9	chr15:42003600-42021800	Weak transcription	Lung	lung
10	chr15:42003600-42026800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
11	chr15:42003600-42027000	Weak transcription	Brain Germinal Matrix	brain
12	chr15:42003600-42028400	Weak transcription	Aorta	Aorta
13	chr15:42003800-42021400	Weak transcription	Fetal Kidney	kidney
14	chr15:42003800-42027200	Weak transcription	Spleen	Spleen
15	chr15:42003800-42028400	Weak transcription	Gastric	stomach
16	chr15:42003800-42028400	Weak transcription	Small Intestine	intestine
17	chr15:42003800-42056000	Weak transcription	Colonic Mucosa	Colon
18	chr15:42004000-42020200	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
19	chr15:42004000-42021200	Weak transcription	Rectal Mucosa Donor 29	rectum
20	chr15:42004000-42021400	Weak transcription	Skeletal Muscle Male	skeletal muscle
21	chr15:42004000-42026800	Weak transcription	Duodenum Smooth Muscle	Duodenum
22	chr15:42004000-42027000	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
23	chr15:42004200-42021400	Weak transcription	Left Ventricle	heart
24	chr15:42004600-42020200	Weak transcription	Fetal Stomach	stomach
25	chr15:42004600-42026600	Weak transcription	Right Ventricle	heart
26	chr15:42004800-42021400	Weak transcription	Sigmoid Colon	Sigmoid Colon
27	chr15:42005400-42019200	Weak transcription	HSMMtube	muscle
28	chr15:42005400-42027000	Weak transcription	iPS-15b Cell Line	embryonic stem cell
29	chr15:42005400-42028400	Weak transcription	Placenta Amnion	Placenta Amnion
30	chr15:42005600-42018600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
31	chr15:42005600-42021200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
32	chr15:42005600-42027200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
33	chr15:42005600-42027400	Weak transcription	NHDF-Ad	bronchial
34	chr15:42005800-42018200	Weak transcription	K562	blood
35	chr15:42005800-42020800	Weak transcription	Stomach Smooth Muscle	stomach
36	chr15:42005800-42020800	Weak transcription	HUVEC	blood vessel
37	chr15:42005800-42022600	Weak transcription	Brain Angular Gyrus	brain
38	chr15:42005800-42027000	Weak transcription	Muscle Satellite Cultured Cells	--
39	chr15:42005800-42028400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
40	chr15:42006000-42019200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
41	chr15:42006000-42021400	Weak transcription	Brain Anterior Caudate	brain
42	chr15:42006000-42022600	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
43	chr15:42006000-42026200	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
44	chr15:42006000-42028400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
45	chr15:42006200-42020600	Weak transcription	Brain Inferior Temporal Lobe	brain
46	chr15:42006200-42021200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
47	chr15:42006200-42021400	Weak transcription	Brain Hippocampus Middle	brain
48	chr15:42006200-42021400	Weak transcription	Ovary	ovary
49	chr15:42006200-42021400	Weak transcription	Skeletal Muscle Female	skeletal muscle
50	chr15:42006200-42022600	Weak transcription	Primary T helper naive cells from peripheral blood	blood

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links