Variant report

Variant	nsv1042311
Chromosome Location	chr15:50083175-50125096
allele	n/a
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:391)
CpG islands
(count:183)
Chromatin interactive
region (count:28)
LncRNA
region (count:4)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:391 , 50 per page) page: 1 2 3 4 5 6 7 8

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	ARID3A	chr15:50124825-50125059	HepG2	liver:	n/a	n/a
2	BHLHE40	chr15:50125052-50125069	GM12878	blood:	n/a	n/a
3	BHLHE40	chr15:50108137-50108424	GM12878	blood:	n/a	n/a
4	CEBPB	chr15:50102291-50102380	H1-hESC	embryonic stem cell:	n/a	chr15:50102311-50102322
5	CEBPB	chr15:50102090-50102516	MCF-7	breast:	n/a	chr15:50102311-50102322
6	CEBPB	chr15:50101995-50102620	A549	lung:	n/a	chr15:50102311-50102322
7	CEBPB	chr15:50122700-50123024	IMR90	lung:	n/a	n/a
8	CEBPB	chr15:50094948-50095333	MCF-7	breast:	n/a	chr15:50095081-50095092 chr15:50095079-50095092 chr15:50095079-50095090 chr15:50095081-50095090 chr15:50095079-50095092
9	CEBPB	chr15:50111917-50111991	A549	lung:	n/a	n/a
10	CEBPB	chr15:50094965-50095232	Hela-S3	cervix:	n/a	chr15:50095081-50095092 chr15:50095079-50095092 chr15:50095079-50095090 chr15:50095081-50095090 chr15:50095079-50095092
11	CEBPB	chr15:50094907-50095268	IMR90	lung:	n/a	chr15:50095081-50095092 chr15:50095079-50095092 chr15:50095079-50095090 chr15:50095081-50095090 chr15:50095079-50095092
12	CEBPB	chr15:50124876-50125066	A549	lung:	n/a	n/a
13	CEBPB	chr15:50102214-50102440	HepG2	liver:	n/a	chr15:50102311-50102322
14	CEBPB	chr15:50102170-50102439	A549	lung:	n/a	chr15:50102311-50102322
15	CEBPB	chr15:50107107-50107131	A549	lung:	n/a	n/a
16	CEBPB	chr15:50102111-50102512	Hela-S3	cervix:	n/a	chr15:50102311-50102322
17	CEBPB	chr15:50123547-50124249	IMR90	lung:	n/a	chr15:50123571-50123579
18	CEBPB	chr15:50102055-50102518	A549	lung:	n/a	chr15:50102311-50102322
19	CEBPB	chr15:50094923-50095256	HepG2	liver:	n/a	chr15:50095081-50095092 chr15:50095079-50095092 chr15:50095079-50095090 chr15:50095081-50095090 chr15:50095079-50095092
20	CEBPB	chr15:50094966-50095240	K562	blood:	n/a	chr15:50095081-50095092 chr15:50095079-50095092 chr15:50095079-50095090 chr15:50095081-50095090 chr15:50095079-50095092
21	CEBPB	chr15:50094992-50095235	A549	lung:	n/a	chr15:50095081-50095092 chr15:50095079-50095092 chr15:50095079-50095090 chr15:50095081-50095090 chr15:50095079-50095092
22	CEBPB	chr15:50102139-50102448	IMR90	lung:	n/a	chr15:50102311-50102322
23	CHD2	chr15:50102176-50102397	Hela-S3	cervix:	n/a	n/a
24	CHD2	chr15:50123804-50124194	Hela-S3	cervix:	n/a	chr15:50123988-50123998
25	CTCF	chr15:50124860-50125010	HAc	cerebellar:	n/a	n/a
26	CTCF	chr15:50124813-50125152	H1-hESC	embryonic stem cell:	n/a	n/a
27	CTCF	chr15:50124960-50125110	Hela-S3	cervix:	n/a	n/a
28	CTCF	chr15:50124924-50125085	GM12891	blood:	n/a	n/a
29	CTCF	chr15:50096440-50096590	HepG2	liver:	n/a	n/a
30	CTCF	chr15:50124860-50125010	HFF	foreskin:	n/a	n/a
31	CTCF	chr15:50124900-50125050	HepG2	liver:	n/a	n/a
32	CTCF	chr15:50124899-50125117	Fibrobl	skin:	n/a	n/a
33	CTCF	chr15:50124940-50125090	GM12872	blood:	n/a	n/a
34	CTCF	chr15:50096280-50096430	NB4	blood:	n/a	n/a
35	CTCF	chr15:50124960-50125110	GM12864	blood:	n/a	n/a
36	CTCF	chr15:50124920-50125070	HMEC	breast:	n/a	n/a
37	CTCF	chr15:50124920-50125070	AG04449	skin:	n/a	n/a
38	CTCF	chr15:50124920-50125070	GM12865	blood:	n/a	n/a
39	CTCF	chr15:50124980-50125130	AG10803	skin:	n/a	n/a
40	CTCF	chr15:50124897-50125103	HepG2	liver:	n/a	n/a
41	CTCF	chr15:50096408-50096503	HepG2	liver:	n/a	n/a
42	CTCF	chr15:50124869-50125103	LNCaP	prostate:	n/a	n/a
43	CTCF	chr15:50124960-50125110	K562	blood:	n/a	n/a
44	CTCF	chr15:50124980-50125130	GM06990	blood:	n/a	n/a
45	CTCF	chr15:50124881-50125133	MCF-7	breast:	n/a	n/a
46	CTCF	chr15:50124920-50125070	HBMEC	blood vessel:	n/a	n/a
47	CTCF	chr15:50124889-50125125	H1-hESC	embryonic stem cell:	n/a	n/a
48	CTCF	chr15:50124781-50125187	H1-hESC	embryonic stem cell:	n/a	n/a
49	CTCF	chr15:50124960-50125110	HMF	breast:	n/a	n/a
50	CTCF	chr15:50123885-50125375	A549	lung:	n/a	n/a

(count:183 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr15:50116359-50116409	GM19239	blood:	n/a
2	chr15:50086377-50086427	PrEC	prostate:	n/a
3	chr15:50116359-50116409	BJ	skin:	n/a
4	chr15:50086377-50086427	A549	lung:	n/a
5	chr15:50086377-50086427	Jurkat	blood:	n/a
6	chr15:50086377-50086427	AG04450	lung:	fetal
7	chr15:50086377-50086427	MCF10A-Er-Src	breast:	n/a
8	chr15:50116359-50116409	GM12891	blood:	n/a
9	chr15:50108785-50108835	RPTEC	kidney:	n/a
10	chr15:50108785-50108835	U87	brain:	n/a
11	chr15:50108785-50108835	AG09319	gingival:	n/a
12	chr15:50108785-50108835	HEK293	kidney:	embryo
13	chr15:50108785-50108835	ovcar-3	ovarian:	n/a
14	chr15:50108785-50108835	AG09309	skin:	n/a
15	chr15:50108785-50108835	HCF	heart:	n/a
16	chr15:50086377-50086427	AoSMC	blood vessel:	n/a
17	chr15:50108785-50108835	NHDF-neo	bronchial:	n/a
18	chr15:50086377-50086427	NT2-D1	testis:	n/a
19	chr15:50108785-50108835	ECC-1	luminal epithelium:	n/a
20	chr15:50086377-50086427	MCF-7	breast:	n/a
21	chr15:50108785-50108835	GM06990	blood:	n/a
22	chr15:50086377-50086427	BJ	skin:	n/a
23	chr15:50086377-50086427	HCT-116	colon:	n/a
24	chr15:50086377-50086427	SKMC	muscle:	n/a
25	chr15:50086377-50086427	NHDF-neo	bronchial:	n/a
26	chr15:50116359-50116409	NT2-D1	testis:	n/a
27	chr15:50086377-50086427	PFSK-1	brain:	n/a
28	chr15:50116359-50116409	RPTEC	kidney:	n/a
29	chr15:50086377-50086427	AG09319	gingival:	n/a
30	chr15:50086377-50086427	HEK293	kidney:	embryo
31	chr15:50108785-50108835	HCPEpiC	choroid plexus:	n/a
32	chr15:50108785-50108835	HIPEpiC	eye:	n/a
33	chr15:50086377-50086427	U87	brain:	n/a
34	chr15:50116359-50116409	SK-N-MC	brain:	n/a
35	chr15:50116359-50116409	IMR90	lung:	fetal
36	chr15:50086377-50086427	BE2_C	brain:	n/a
37	chr15:50108785-50108835	K562	blood:	n/a
38	chr15:50086377-50086427	IMR90	lung:	fetal
39	chr15:50116359-50116409	HL-60	blood:	n/a
40	chr15:50108785-50108835	NH-A	brain:	n/a
41	chr15:50116359-50116409	ovcar-3	ovarian:	n/a
42	chr15:50108785-50108835	NHBE	bronchial:	n/a
43	chr15:50108785-50108835	CMK	blood:	n/a
44	chr15:50116359-50116409	SKMC	muscle:	n/a
45	chr15:50116359-50116409	GM12878	blood:	n/a
46	chr15:50108785-50108835	AG10803	skin:	n/a
47	chr15:50116359-50116409	K562	blood:	n/a
48	chr15:50108785-50108835	NT2-D1	testis:	n/a
49	chr15:50116359-50116409	GM06990	blood:	n/a
50	chr15:50116359-50116409	HPAEpiC	pulmonary alveolar:	n/a

(count:28 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr15:50065517..50067903-chr15:50116591..50118640,2	MCF-7	breast:
2	chr15:50124105..50124982-chr5:57921872..57922373,2	MCF-7	breast:
3	chr15:49930555..49931785-chr15:50124192..50125413,7	MCF-7	breast:
4	chr15:50084237..50085738-chr17:56736341..56738011,2	MCF-7	breast:
5	chr15:49813617..49814647-chr15:50124460..50125524,4	MCF-7	breast:
6	chr15:50092819..50094649-chr15:50096993..50098601,2	MCF-7	breast:
7	chr15:49914376..49915416-chr15:50124445..50125402,4	MCF-7	breast:
8	chr15:49906396..49908796-chr15:50121690..50125085,3	MCF-7	breast:
9	chr15:50097374..50099076-chr15:50108768..50110435,2	MCF-7	breast:
10	chr15:49911930..49914720-chr15:50121059..50122891,3	MCF-7	breast:
11	chr15:50101806..50104896-chr15:50108542..50111577,3	K562	blood:
12	chr15:50097374..50099076-chr15:50108768..50110435,2	MCF-7	breast:
13	chr15:50101806..50104896-chr15:50108542..50111577,3	K562	blood:
14	chr15:50124508..50125493-chr15:50343834..50344700,3	MCF-7	breast:
15	chr15:49912462..49913074-chr15:50124499..50125268,2	MCF-7	breast:
16	chr15:50090867..50093213-chr15:50102462..50104397,2	K562	blood:
17	chr15:49914595..49915377-chr15:50124565..50125477,5	MCF-7	breast:
18	chr15:50090867..50093213-chr15:50102462..50104397,2	K562	blood:
19	chr15:49912489..49914400-chr15:50113634..50115874,2	MCF-7	breast:
20	chr15:49911896..49914625-chr15:50123253..50125485,3	MCF-7	breast:
21	chr15:50124501..50125449-chr15:50167403..50168098,3	MCF-7	breast:
22	chr15:50092819..50094649-chr15:50096993..50098601,2	MCF-7	breast:
23	chr15:50099998..50102437-chr15:50104715..50106817,2	MCF-7	breast:
24	chr15:49898526..49899536-chr15:50124520..50125405,5	MCF-7	breast:
25	chr15:50108196..50110758-chr15:50111923..50114001,2	MCF-7	breast:
26	chr15:50108196..50110758-chr15:50111923..50114001,2	MCF-7	breast:
27	chr15:50115862..50118936-chr15:50156885..50160931,3	MCF-7	breast:
28	chr15:50099998..50102437-chr15:50104715..50106817,2	MCF-7	breast:

(count:4 , 50 per page) page: 1

No.	lncRNA name	Chromosome Location	lncRNA alias
1	lnc-DTWD1-3	chr15:50086443-50088294	NONHSAT042390
2	lnc-DTWD1-6	chr15:50100869-50101106	expReg_chr15_3100_+
3	lnc-DTWD1-5	chr15:50099752-50100023	expReg_chr15_3096_+
4	lnc-DTWD1-4	chr15:50099291-50099548	expReg_chr15_3094_+

No data

Variant related genes	Relation type
ENSG00000259388	TF binding region
ENSG00000259388	CpG island
ENSG00000166262	chromatin interactions
ENSG00000104047	chromatin interactions
ENSG00000202077	chromatin interactions

Extended variants
information (count: 1226 )
Associated
traits (count: 65 )

Variant overlapped rSNPs/rCNVs (count:1226 , 50 per page) page: 1 2 3 4 5 6 7 ... 25

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	rs554268020	chr15:50083199-50083200	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
2	rs372920108	chr15:50083217-50083218	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
3	rs540626101	chr15:50083308-50083309	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
4	rs189777049	chr15:50083323-50083324	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
5	rs139048212	chr15:50083346-50083347	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
6	rs577115213	chr15:50083351-50083352	ZNF genes & repeats	n/a	n/a	Overlapped CNVs	n/a
7	rs2456844	chr15:50084276-50084277	Inactive region	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
8	rs2456845	chr15:50084292-50084293	Inactive region	Chromatin interactive region	1 gene(s)	LD-proxies of rSNP Overlapped rCNV	n/a
9	rs551930899	chr15:50084301-50084302	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
10	rs74318561	chr15:50084317-50084318	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
11	rs531179573	chr15:50084319-50084320	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
12	rs77000294	chr15:50084339-50084340	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
13	rs149840603	chr15:50084344-50084345	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
14	rs62023968	chr15:50084355-50084356	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
15	rs536641633	chr15:50084371-50084372	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
16	rs145724960	chr15:50084386-50084387	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
17	rs528605511	chr15:50084394-50084395	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
18	rs147877387	chr15:50084399-50084400	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
19	rs543908537	chr15:50084401-50084402	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
20	rs558801576	chr15:50084403-50084404	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
21	rs181457904	chr15:50084407-50084408	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
22	rs541268547	chr15:50084430-50084431	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
23	rs571734770	chr15:50084439-50084440	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
24	rs186632976	chr15:50084473-50084474	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
25	rs530367398	chr15:50084497-50084498	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
26	rs190505822	chr15:50084539-50084540	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
27	rs562972038	chr15:50084577-50084578	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
28	rs530444138	chr15:50084579-50084580	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
29	rs552213110	chr15:50084607-50084608	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
30	rs147065593	chr15:50084685-50084686	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
31	rs528242683	chr15:50084743-50084744	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
32	rs546524198	chr15:50084764-50084765	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
33	rs557390218	chr15:50084796-50084797	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
34	rs377250532	chr15:50084798-50084799	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
35	rs568352050	chr15:50084864-50084865	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
36	rs183087791	chr15:50084885-50084886	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
37	rs553720753	chr15:50084913-50084914	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
38	rs557316337	chr15:50084922-50084923	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
39	rs111570384	chr15:50084947-50084948	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
40	rs367846992	chr15:50084957-50084958	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
41	rs537452030	chr15:50084959-50084960	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
42	rs138375625	chr15:50084995-50084996	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
43	rs565749544	chr15:50084998-50084999	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
44	rs541607133	chr15:50085022-50085023	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
45	rs142194817	chr15:50085124-50085125	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
46	rs536330110	chr15:50085135-50085136	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
47	rs574772616	chr15:50085170-50085171	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
48	rs549598529	chr15:50085207-50085208	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
49	rs187905302	chr15:50085217-50085218	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a
50	rs143129066	chr15:50085270-50085271	Inactive region	Chromatin interactive region	1 gene(s)	Overlapped CNVs	n/a

Variant related diseases (count:65)

Disease	PMID	Source
Ewing''s sarcoma	21437220	CNVD
Schizophrenia	19415332	CNVD
Breast cancer	22522925	CNVD
Autism	22495311	CNVD
Wilms tumour	21544195	CNVD
Testicular germ cell tumor	18059402	CNVD
cataract	16735990	CNVD
Cancer	21637783	CNVD
Colorectal cancer	20709793	CNVD
Medulloblastoma	21979893	CNVD
spastic paraplegia with thinning of corpus callosum	19105190	CNVD
Schizophrenia	21324950	CNVD
Astrocytoma	17387387	CNVD
Esophageal squamous carcinoma	21637470	CNVD
Endometrial cancer	22040021	CNVD
Breast cancer	21264507	CNVD
Disease	21824424	CNVD
Melanoma	18172304	CNVD
Colorectal cancer	16774939	CNVD
Gastric cancer	17167181	CNVD
Neuroblastoma	19435921	CNVD
Colorectal cancer	19359472	CNVD
Monoclonal gammopathy of undetermined significance	17077331	CNVD
Multiple myeloma	17077331	CNVD
Colorectal cancer	16272173	CNVD
Gastrointestinal stromal cancer	20470368	CNVD
Multiple myeloma	17550852	CNVD
Intellectual disability	22102821	CNVD
T-cell prolymphocytic leukemia	19278963	CNVD
Acute myeloid leukemia	20729466	CNVD
Prostate cancer	16573809	CNVD
Basal cell lymphoma	16317097	CNVD
Diffuse large b-cell lymphoma	16317097	CNVD
Multiple myeloma	20724749	CNVD
Lung cancer	18438408	CNVD
Chronic lymphocytic leukemia	21546498	CNVD
Breast cancer	21785460	CNVD
Gastrointestinal stromal cancer	16982739	CNVD
Prostate cancer	18632612	CNVD
small cell lung cancer	20016488	CNVD
Acute lymphoblastic leukemia	22237106	CNVD
Basal cell lymphoma	17053054	CNVD
Breast cancer	22032731	CNVD
Basal cell lymphoma	17170743	CNVD
Follicular lymphoma	17170743	CNVD
Hirschsprung''s Disease	21712996	CNVD
Myeloproliferative neoplasm	20015882	CNVD
Cancer	21129771	CNVD
Breast cancer	16272173	CNVD
Hepatocellular carcinoma	16750200	CNVD
Abnormal phenotypes	18644119	CNVD
Cancer	16751803	CNVD
Esophageal adenocarcinoma	18820669	CNVD
Myelofibrosis	22110671	CNVD
Gastrointestinal stromal cancer	20818650	CNVD
Breast cancer	21364760	CNVD
Non-syndromic sensorineural hearing loss	18451855	CNVD
Breast cancer	20668451	CNVD
Cancer	20668451	CNVD
Lung cancer	20668451	CNVD
Ovarian cancer	20668451	CNVD
Pancreas cancer	20668451	CNVD
Prostate cancer	20668451	CNVD
Pancreatic cancer	17952125	CNVD
Non-syndromic sensorineural hearing loss	22037309	CNVD

Chromatin state (count:181 , 50 per page) page: 1 2 3 4

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:50080800-50083400	ZNF genes & repeats	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr15:50083000-50083400	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
3	chr15:50090200-50091000	Enhancers	Ovary	ovary
4	chr15:50093400-50093800	Enhancers	Monocytes-CD14+_RO01746	blood
5	chr15:50093600-50094000	Enhancers	Fetal Muscle Leg	muscle
6	chr15:50095600-50096400	Enhancers	Sigmoid Colon	Sigmoid Colon
7	chr15:50097400-50097800	ZNF genes & repeats	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr15:50097800-50098000	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr15:50098000-50101200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr15:50098600-50099400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
11	chr15:50100400-50103200	Enhancers	Hela-S3	cervix
12	chr15:50101200-50101400	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
13	chr15:50101200-50103200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
14	chr15:50101400-50102400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr15:50101400-50103000	Enhancers	Breast Myoepithelial Primary Cells	Breast
16	chr15:50101400-50103000	Enhancers	A549	lung
17	chr15:50101600-50103000	Enhancers	Fetal Stomach	stomach
18	chr15:50101800-50102200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
19	chr15:50101800-50102400	Enhancers	Sigmoid Colon	Sigmoid Colon
20	chr15:50101800-50103000	Enhancers	Ovary	ovary
21	chr15:50101800-50103200	Enhancers	Fetal Muscle Leg	muscle
22	chr15:50102000-50103000	Enhancers	Aorta	Aorta
23	chr15:50102000-50103000	Enhancers	Skeletal Muscle Female	skeletal muscle
24	chr15:50102200-50102800	Enhancers	Right Atrium	heart
25	chr15:50102200-50107400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
26	chr15:50102400-50103200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
27	chr15:50102400-50107800	Weak transcription	Sigmoid Colon	Sigmoid Colon
28	chr15:50102600-50102800	Enhancers	Fetal Lung	lung
29	chr15:50102600-50103200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
30	chr15:50102600-50103200	Enhancers	Adipose Nuclei	Adipose
31	chr15:50102800-50103200	Enhancers	Colon Smooth Muscle	Colon
32	chr15:50102800-50103200	Enhancers	Rectal Smooth Muscle	rectum
33	chr15:50102800-50103400	Weak transcription	Fetal Lung	lung
34	chr15:50103000-50105800	Weak transcription	Fetal Stomach	stomach
35	chr15:50103000-50106000	Weak transcription	Ovary	ovary
36	chr15:50103000-50107800	Weak transcription	Aorta	Aorta
37	chr15:50103200-50105000	Weak transcription	Fetal Muscle Leg	muscle
38	chr15:50103200-50106000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
39	chr15:50103200-50106000	Weak transcription	Colon Smooth Muscle	Colon
40	chr15:50103200-50107400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
41	chr15:50103200-50108200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
42	chr15:50103400-50104000	Enhancers	Fetal Lung	lung
43	chr15:50104000-50105800	Weak transcription	Fetal Lung	lung
44	chr15:50104600-50104800	Enhancers	Breast Myoepithelial Primary Cells	Breast
45	chr15:50105000-50105600	Enhancers	Fetal Muscle Leg	muscle
46	chr15:50105200-50105400	Enhancers	Right Atrium	heart
47	chr15:50105400-50106800	Enhancers	HSMMtube	muscle
48	chr15:50105600-50106600	Weak transcription	Fetal Muscle Leg	muscle
49	chr15:50105600-50106800	Enhancers	HSMM	muscle
50	chr15:50105800-50106200	Enhancers	Fetal Lung	lung

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links